prot_H-paniculata_contig42175.10806.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42175.10806.1
Unique Nameprot_H-paniculata_contig42175.10806.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: D7FN57_ECTSI (Glutamate--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN57_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.940e-33
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            QVVTRFPPEPSGYLHIGHVKACLLNQYYA +YGGKMIVRFDDTNPSKEKEEYA SIV+DLATLG+
Sbjct:  347 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQHYGGKMIVRFDDTNPSKEKEEYAASIVQDLATLGI 411          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A7R9ZTU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZTU8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.150e-30
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            QVVTRFPPEPSGYLH+GH KACLLN YYA  Y G++I+RFDDTNPSKEKEEY  SI++DL TLGV
Sbjct:   37 QVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRLIIRFDDTNPSKEKEEYQESILQDLTTLGV 101          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A7S4AI61_9STRA (Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI61_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.150e-28
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGVS 70
            QVVTRFPPEPSGYLH+GH KACLLN YYA  Y G+MIVRFDDTNPSKEKEEY  SIV+DL TLGV+
Sbjct:  370 QVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRMIVRFDDTNPSKEKEEYQQSIVEDLKTLGVN 435          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A1E7EUW5_9STRA (Glutamate--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUW5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.870e-28
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            QVVTRFPPEPSGYLH+GH KACLLN YYA  Y G++I+RFDDTNPSKEKEEY  SI++DLATLGV
Sbjct:   11 QVVTRFPPEPSGYLHVGHAKACLLNDYYAKRYQGRLIIRFDDTNPSKEKEEYQQSILEDLATLGV 75          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A448ZPH2_9STRA (Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPH2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.450e-28
Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            +VVTRFPPEPSGYLH+GH KACLLN YYA  Y G+MIVRFDDTNPSKEKEEY  SIV+DL TLGV
Sbjct:  376 RVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRMIVRFDDTNPSKEKEEYQQSIVEDLKTLGV 440          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A7R9ZU84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZU84_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.340e-28
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            QVVTRFPPEPSGYLH+GH KACLLN YYA  Y G++I+RFDDTNPSKEKEEY  SI++DL TLGV
Sbjct:  379 QVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRLIIRFDDTNPSKEKEEYQESILQDLTTLGV 443          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A7S2GKB1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2GKB1_9DINO)

HSP 1 Score: 105 bits (262), Expect = 1.020e-27
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGVSY 71
            +VVTRFPPEPSGYLHIGH KA LLN  YA  YGGKM++RFDDTNPSKEK EY  SIV+DL  LG+ +
Sbjct:    1 KVVTRFPPEPSGYLHIGHAKAALLNYTYAQLYGGKMLLRFDDTNPSKEKMEYQESIVEDLKLLGIHH 67          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A7S4HXR2_9EUKA (Glutamate--tRNA ligase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HXR2_9EUKA)

HSP 1 Score: 113 bits (283), Expect = 1.370e-27
Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0
Query:    2 ENDQVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            E D VVTRFPPEPSGYLHIGH KA LLNQYYA  Y GK+++RFDDTNP+KEKEEY  +I++DL TLG+
Sbjct:  219 EGDTVVTRFPPEPSGYLHIGHAKAALLNQYYAKQYNGKLLIRFDDTNPTKEKEEYMDNILRDLKTLGI 286          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A7S1Z142_9STRA (Glutamate--tRNA ligase n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z142_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.390e-27
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    5 QVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            QVVTRFPPEPSGYLH+GH KACLLN YYA  Y G++I+RFDDTNPSKEKEEY  SI++DLA LGV
Sbjct:  397 QVVTRFPPEPSGYLHVGHAKACLLNDYYARRYRGRLILRFDDTNPSKEKEEYQASIIEDLAKLGV 461          
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Match: A0A077R9B7_9BASI (Glutamate--tRNA ligase (Fragment) n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077R9B7_9BASI)

HSP 1 Score: 113 bits (282), Expect = 1.850e-27
Identity = 49/68 (72.06%), Postives = 60/68 (88.24%), Query Frame = 0
Query:    2 ENDQVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPSKEKEEYATSIVKDLATLGV 69
            ++ QVVTRFPPEPSGYLH+GH KA +LNQY+AT Y GK+I+RFDDTNPSKEKEE+  SI++DLA LG+
Sbjct:  199 KHGQVVTRFPPEPSGYLHVGHAKAAILNQYFATQYNGKLIIRFDDTNPSKEKEEFEQSIIQDLALLGI 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42175.10806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN57_ECTSI2.940e-3392.31Glutamate--tRNA ligase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A7R9ZTU8_9STRA6.150e-3078.46Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S4AI61_9STRA1.150e-2881.82Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia au... [more]
A0A1E7EUW5_9STRA1.870e-2880.00Glutamate--tRNA ligase n=1 Tax=Fragilariopsis cyli... [more]
A0A448ZPH2_9STRA5.450e-2881.54Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia mu... [more]
A0A7R9ZU84_9STRA7.340e-2878.46Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S2GKB1_9DINO1.020e-2773.13Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S4HXR2_9EUKA1.370e-2773.53Glutamate--tRNA ligase n=1 Tax=Vannella sp. CB-201... [more]
A0A7S1Z142_9STRA1.390e-2778.46Glutamate--tRNA ligase n=5 Tax=Ditylum brightwelli... [more]
A0A077R9B7_9BASI1.850e-2772.06Glutamate--tRNA ligase (Fragment) n=1 Tax=Melanops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000924Glutamyl/glutaminyl-tRNA synthetasePRINTSPR00987TRNASYNTHGLUcoord: 23..34
score: 32.92
coord: 9..21
score: 66.54
coord: 38..51
score: 46.96
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..74
e-value: 1.1E-30
score: 108.7
IPR020058Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainPFAMPF00749tRNA-synt_1ccoord: 5..71
e-value: 5.7E-29
score: 101.0
NoneNo IPR availablePANTHERPTHR43097GLUTAMINE-TRNA LIGASEcoord: 2..72
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 5..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42175contigH-paniculata_contig42175:1232..1459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42175.10806.1mRNA_H-paniculata_contig42175.10806.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42175 1232..1459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42175.10806.1 ID=prot_H-paniculata_contig42175.10806.1|Name=mRNA_H-paniculata_contig42175.10806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
LENDQVVTRFPPEPSGYLHIGHVKACLLNQYYATYYGGKMIVRFDDTNPS
KEKEEYATSIVKDLATLGVSYRTAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000924Glu/Gln-tRNA-synth
IPR014729Rossmann-like_a/b/a_fold
IPR020058Glu/Gln-tRNA-synth_Ib_cat-dom