mRNA_H-paniculata_contig421.10787.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig421.10787.1
Unique NamemRNA_H-paniculata_contig421.10787.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: D7FNH2_ECTSI (Putative: flagellar/basal body protein, PACRG (Parkin co-regulated gene)-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH2_ECTSI)

HSP 1 Score: 560 bits (1442), Expect = 3.730e-199
Identity = 287/323 (88.85%), Postives = 297/323 (91.95%), Query Frame = 3
Query:   72 MTMRTVNGSIKIREKPTIFKETGSPFDATPIHSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGTVIPATS--RAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            MT RT+NGSIKIREK  IFKETGSPFDATPIHSIKLRPGGHDTL AKPID+SAFSYS++TA Q+P SFLKRGTGNGGTVIP  S   +  GG   G  +K   A+A AA KK K+RDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQK VIVKVLKVLQ+LVTCDQGPD QGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS
Sbjct:    1 MTARTINGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARA-AAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 322          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: A0A6S9L0N5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L0N5_HETAK)

HSP 1 Score: 459 bits (1180), Expect = 1.590e-159
Identity = 238/322 (73.91%), Postives = 263/322 (81.68%), Query Frame = 3
Query:   69 SMTMRTVNGSIKIREKPTIFKETGSPFDATPIHSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGTVIPATSRAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            S TM+ +N S+KI  +    K TGSPFD+T + + + RPGGHD L  K ID+ AFS S+KT +  PQ+F+K+GTG GGT+                P K+    A   ++K K+ DFQAFA+R NPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQK VIVKVLKVLQALV CD GPD QGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELI ETLE FE++GGEDAFINIKYLVPV+QSVVVS
Sbjct:    2 SSTMK-MNDSLKIANRNQGPKITGSPFDSTIVGAYRERPGGHDILPTKAIDVGAFSISKKTNRPTPQNFVKKGTGTGGTLT--------------IPQKDEKPSAHV-QRKKKIEDFQAFAQRANPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREVEEPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKRVIVKVLKVLQALVQCDTGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELINETLEQFEIHGGEDAFINIKYLVPVYQSVVVS 307          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: A0A7S2UTZ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTZ0_9STRA)

HSP 1 Score: 452 bits (1162), Expect = 9.010e-157
Identity = 232/312 (74.36%), Postives = 257/312 (82.37%), Query Frame = 3
Query:   99 IKIREKPTIFKETGSPFDATPIHSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGTVIPATSRAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            I+I ++    K TGSPFD+T I + K RPGGH+ +  + +D+ AF+ ++ TA+  P  FLK+GTG GGT+               +P   P  + KA  KK+K RDF AFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQK VIVKVLKVLQALV CD GP+ QGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELIMETLE FEV+GG+DAFINIKYLVPV+QSVVV+
Sbjct:   13 IRISDRNHGSKHTGSPFDSTLIANYKDRPGGHEIIKPRNVDVGAFAVTKTTAKPTPDRFLKKGTGLGGTLT--------------APKGGPQEQTKA--KKDKCRDFGAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRETEDPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKKVIVKVLKVLQALVQCDTGPEGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELIMETLEQFEVHGGDDAFINIKYLVPVYQSVVVT 308          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: A0A836CE89_9STRA (Putative flagellar/basal body protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE89_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 1.320e-155
Identity = 228/316 (72.15%), Postives = 256/316 (81.01%), Query Frame = 3
Query:   87 VNGSIKIREKPTIFKETGSPFDATPIHSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGTVIPATSRAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            ++GS+K+  +    K TGSPFD T   S+  R GGH+ L+ + ID++AFS+S++  + +P+ FLKRGTG GG + P  +                        KK+K +DFQAF+ERPNPPNT+ RRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+EMPYAFLAEQGVYDMLSAGS KVLPVIPQLIIPIKTALNTR KGVIVKVLKVLQALV CDQG D Q LIGQALVPYYRQILP+LNIFIR NDNLGD IDYGQQRRENLGELI+ETLEAFEVNGGEDAFINIKYLVPV+QSVVV+
Sbjct:    1 MSGSLKLGTQKETIKHTGSPFDTTTA-SLTKRAGGHEGLAPRAIDVAAFSHSKQVEKPSPKKFLKRGTGIGGMLAPVATTTV--------------------VKKSKPKDFQAFSERPNPPNTQLRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREMEMPYAFLAEQGVYDMLSAGSAKVLPVIPQLIIPIKTALNTRIKGVIVKVLKVLQALVACDQGTDGQALIGQALVPYYRQILPILNIFIRNNDNLGDTIDYGQQRRENLGELIVETLEAFEVNGGEDAFINIKYLVPVYQSVVVT 295          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: A0A8J2WZN8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZN8_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 3.860e-148
Identity = 221/313 (70.61%), Postives = 254/313 (81.15%), Query Frame = 3
Query:   99 IKIREKPTIFKETGSPFDATPIHSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGT-VIPATSRAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            +++R++   F ETGS FD+T   +I +R GGH++L  + ++  AF  SR+T ++ P  FLK+GTG GGT   PA             PA+E V K +A   K+K+ DFQAFAERPNPPNTEFRRFYERGDLPVQ+DHGGV NR+AWKVD+QKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+S+G  KVLPV+PQLIIPIKTALNTR K VIVKVLKVLQALV CD  P+ Q LIGQALVPYYRQILPVLNIF+R NDNLGDGIDYGQQRRENLGELI ETLE FEV+GGEDAFINIKYLVPV+QSVVV+
Sbjct:   10 LRVRQRQVHFAETGSCFDSTNFEAITVRAGGHESLPRRRVNAEAFGNSRRTRRELPSDFLKKGTGTGGTDARPA-------------PAEE-VKKRQAP--KSKLMDFQAFAERPNPPNTEFRRFYERGDLPVQVDHGGVSNRVAWKVDVQKLDFHHYLPIFFDGLREVEQPYAFLAEQGVYDMMSSGWQKVLPVVPQLIIPIKTALNTRSKPVIVKVLKVLQALVACDCVPEGQHLIGQALVPYYRQILPVLNIFVRSNDNLGDGIDYGQQRRENLGELIAETLEHFEVHGGEDAFINIKYLVPVYQSVVVA 306          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: A0A7S2KYM2_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYM2_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 8.470e-146
Identity = 222/319 (69.59%), Postives = 254/319 (79.62%), Query Frame = 3
Query:   99 IKIREKPTIFKETGSPFDATPI-HSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGT------VIPATSRAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            IK+REK   F ETGS FDAT + H  K+R GGH+ L  K +D +AF + +KTA++ PQ F ++GTG GGT      V+P+T            P + PV K    EKK K  +F AFA RPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKV I KLD+HHYLPIFFDGLRE+E PYAFLAEQGVYDM+  GS+KVLPVIPQLIIPIKTALNTRQ+ VI+KVLKVLQALV CDQ  +EQ L+GQALVPYYRQILPVLNIFIRQN+NLGDGIDYGQ+ R +LGELIMETLE FE+NGGEDAFINIKYLVPV+QS +++
Sbjct:    9 IKMREKLPSFAETGSCFDATKLGHLSKVRAGGHEALPIKYVDENAFCFVKKTARRTPQEFTRKGTGTGGTLRIPKPVVPSTM-----------PIEPPVLK----EKKKKAINFSAFAARPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVAIDKLDYHHYLPIFFDGLREIEEPYAFLAEQGVYDMMQMGSSKVLPVIPQLIIPIKTALNTRQRIVIIKVLKVLQALVKCDQ--NEQNLVGQALVPYYRQILPVLNIFIRQNENLGDGIDYGQKTRGSLGELIMETLEEFEMNGGEDAFINIKYLVPVYQSSILT 310          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: K0SM83_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SM83_THAOC)

HSP 1 Score: 398 bits (1023), Expect = 2.220e-135
Identity = 205/324 (63.27%), Postives = 240/324 (74.07%), Query Frame = 3
Query:   99 IKIREKPTIFKETGSPFDATPIHSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGTVIPATSRAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQG------------VYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            +  R K   F ETGS FDAT  H I ++PGGHD L    +D+SAFS+SRK  +++P+ F++RGTG GGT+ P T           +    P  +      +N  +   AF ERPNPPNTEFRRFYERGDLPVQI+HGG HNRIAWKV I+KLDFHHYLPIFFDGLRE+EMPYAFLAEQG            VYDM+  GSNKV PV+PQLIIPIKTALNTR + VI KVLKVLQALV CD+G   + L+GQALVPYYRQILPVLNIFIR+NDNLGDGIDYGQ+ R NLG LIME LEAFEV GG+DA+INIKY VP+++S ++S
Sbjct:    3 LSTRRKTPTFVETGSCFDATNAHHITVQPGGHDALPKNELDVSAFSFSRKIERRSPKQFMRRGTGTGGTLRPPTKDETPPDFPDENVTPSPGRRLSTDRIRNPKQKKTAFMERPNPPNTEFRRFYERGDLPVQIEHGGCHNRIAWKVAIEKLDFHHYLPIFFDGLREVEMPYAFLAEQGKFPSLRVFLRKGVYDMMQIGSNKVAPVVPQLIIPIKTALNTRDQSVIAKVLKVLQALVKCDKG---KNLVGQALVPYYRQILPVLNIFIRKNDNLGDGIDYGQRHRGNLGGLIMECLEAFEVAGGQDAYINIKYFVPIYESSILS 323          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: F0Y9M8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9M8_AURAN)

HSP 1 Score: 366 bits (940), Expect = 2.620e-124
Identity = 180/200 (90.00%), Postives = 188/200 (94.00%), Query Frame = 3
Query:  423 AFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQS 1022
            AFAERPNPPNTEFRRFYERGDLPVQIDHGGV NRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+S+G  KVLPVIPQLIIPIKTALNTR+K VIVKVLKVLQALV CD  P+ Q LIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLE FE++GGEDAFINIKYLVP +QS
Sbjct:   27 AFAERPNPPNTEFRRFYERGDLPVQIDHGGVTNRIAWKVDIQKLDFHHYLPIFFDGLREVEQPYAFLAEQGVYDMMSSGWQKVLPVIPQLIIPIKTALNTRKKEVIVKVLKVLQALVMCDTVPEGQHLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEYFEIHGGEDAFINIKYLVPTYQS 226          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: A0A7S2AT99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AT99_9STRA)

HSP 1 Score: 369 bits (948), Expect = 3.730e-124
Identity = 191/311 (61.41%), Postives = 231/311 (74.28%), Query Frame = 3
Query:   99 IKIREKPTI-FKETGSPFDATPIHSIKLRPGGHDTLSAKPIDISAFSYSRKTAQQNPQSFLKRGTGNGGTVIPATSRAAGGGQEAGSPAKEPVAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVV 1028
            +KI  K  + ++ETGS FD+T +  IK RPG  +  +   +D+SAFS SR+T ++   SF K+GTG+GGT+I          +    PAK+P+  +K           +A + R NPPNTEFRRFYERGDLPVQIDHGGV N++ WKVDI+KLDFHHYLPIF++GLRE+E PY F+A QGVYDML  G NKVLPVIPQLIIP+KTALNTR K VI KVLKVLQ  V CDQ  +EQGLIGQA VPYYRQILPVLN++ R  DN GDGIDY Q+ ++NLGELI ETLE FE+ GG+DAFINIKYL+P +QSVV
Sbjct:   25 VKIVRKSALKWRETGSVFDSTNVGVIKARPGVDECAAMPDVDVSAFSMSRRTTRKTADSFTKKGTGSGGTLI----------KPKNGPAKKPLTFSK-----------KATSRRSNPPNTEFRRFYERGDLPVQIDHGGVENKLQWKVDIKKLDFHHYLPIFYEGLREVEEPYNFIARQGVYDMLHFGYNKVLPVIPQLIIPLKTALNTRDKEVIQKVLKVLQETVKCDQRGNEQGLIGQAFVPYYRQILPVLNLYCRAIDNQGDGIDYSQRFQKNLGELIGETLEIFEIYGGDDAFINIKYLIPTYQSVV 314          
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Match: A0A7S4D719_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D719_HETAK)

HSP 1 Score: 359 bits (921), Expect = 1.180e-121
Identity = 177/190 (93.16%), Postives = 182/190 (95.79%), Query Frame = 3
Query:  465 RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1034
            RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQK VIVKVLKVLQALV CD GPD QGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELI ETLE FE++GGEDAFINIKYLVPV+QSVVVS
Sbjct:   22 RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREVEEPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKRVIVKVLKVLQALVQCDTGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELINETLEQFEIHGGEDAFINIKYLVPVYQSVVVS 211          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig421.10787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH2_ECTSI3.730e-19988.85Putative: flagellar/basal body protein, PACRG (Par... [more]
A0A6S9L0N5_HETAK1.590e-15973.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UTZ0_9STRA9.010e-15774.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CE89_9STRA1.320e-15572.15Putative flagellar/basal body protein n=1 Tax=Trib... [more]
A0A8J2WZN8_9STRA3.860e-14870.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2KYM2_9STRA8.470e-14669.59Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
K0SM83_THAOC2.220e-13563.27Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
F0Y9M8_AURAN2.620e-12490.00Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2AT99_9STRA3.730e-12461.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4D719_HETAK1.180e-12193.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig421contigH-paniculata_contig421:18761..22822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score559.3
Seed ortholog evalue1.2e-156
Seed eggNOG ortholog2880.D7FNH2
Preferred namePACRG
Hectar predicted targeting categoryother localisation
EggNOG free text desc.negative regulation of cell death
EggNOG OGsKOG3961@1,KOG3961@2759
Ec32 ortholog descriptionputative: flagellar/basal body protein, PACRG (parkin co-regulated gene) -like protein
Ec32 orthologEc-01_005470.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1139
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig421.10787.1prot_H-paniculata_contig421.10787.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig421 18832..22720 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930280.6612864-UTR-H-paniculata_contig421:18760..188311622930280.6612864-UTR-H-paniculata_contig421:18760..18831Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig421 18761..18831 +
1691481223.3667858-UTR-H-paniculata_contig421:18760..188311691481223.3667858-UTR-H-paniculata_contig421:18760..18831Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig421 18761..18831 +
1622930280.77621-UTR-H-paniculata_contig421:22720..228221622930280.77621-UTR-H-paniculata_contig421:22720..22822Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig421 22721..22822 +
1691481223.4403613-UTR-H-paniculata_contig421:22720..228221691481223.4403613-UTR-H-paniculata_contig421:22720..22822Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig421 22721..22822 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930280.6791437-CDS-H-paniculata_contig421:18831..189361622930280.6791437-CDS-H-paniculata_contig421:18831..18936Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 18832..18936 +
1691481223.378696-CDS-H-paniculata_contig421:18831..189361691481223.378696-CDS-H-paniculata_contig421:18831..18936Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 18832..18936 +
1622930280.6938229-CDS-H-paniculata_contig421:19745..199911622930280.6938229-CDS-H-paniculata_contig421:19745..19991Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 19746..19991 +
1691481223.3946168-CDS-H-paniculata_contig421:19745..199911691481223.3946168-CDS-H-paniculata_contig421:19745..19991Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 19746..19991 +
1622930280.7103224-CDS-H-paniculata_contig421:20706..208351622930280.7103224-CDS-H-paniculata_contig421:20706..20835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 20707..20835 +
1691481223.4074328-CDS-H-paniculata_contig421:20706..208351691481223.4074328-CDS-H-paniculata_contig421:20706..20835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 20707..20835 +
1622930280.7236526-CDS-H-paniculata_contig421:21136..212931622930280.7236526-CDS-H-paniculata_contig421:21136..21293Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 21137..21293 +
1691481223.4156098-CDS-H-paniculata_contig421:21136..212931691481223.4156098-CDS-H-paniculata_contig421:21136..21293Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 21137..21293 +
1622930280.7387123-CDS-H-paniculata_contig421:21577..217451622930280.7387123-CDS-H-paniculata_contig421:21577..21745Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 21578..21745 +
1691481223.4237375-CDS-H-paniculata_contig421:21577..217451691481223.4237375-CDS-H-paniculata_contig421:21577..21745Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 21578..21745 +
1622930280.7589166-CDS-H-paniculata_contig421:22559..227201622930280.7589166-CDS-H-paniculata_contig421:22559..22720Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 22560..22720 +
1691481223.4318986-CDS-H-paniculata_contig421:22559..227201691481223.4318986-CDS-H-paniculata_contig421:22559..22720Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig421 22560..22720 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig421.10787.1

>prot_H-paniculata_contig421.10787.1 ID=prot_H-paniculata_contig421.10787.1|Name=mRNA_H-paniculata_contig421.10787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp
MTMRTVNGSIKIREKPTIFKETGSPFDATPIHSIKLRPGGHDTLSAKPID
ISAFSYSRKTAQQNPQSFLKRGTGNGGTVIPATSRAAGGGQEAGSPAKEP
VAKAKAAEKKNKMRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHN
RIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKV
LPVIPQLIIPIKTALNTRQKGVIVKVLKVLQALVTCDQGPDEQGLIGQAL
VPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNG
GEDAFINIKYLVPVFQSVVVS*
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mRNA from alignment at H-paniculata_contig421:18761..22822+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig421.10787.1 ID=mRNA_H-paniculata_contig421.10787.1|Name=mRNA_H-paniculata_contig421.10787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4062bp|location=Sequence derived from alignment at H-paniculata_contig421:18761..22822+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCGAGGAAGAGCATATTATGGAAGAAGCAGGGGTTGCCACCAAGAACG CTACAGAAGTGAACTGCAAGTATGACTATGAGGACTGTGAATGGTTCTAT CAAGATCAGGGAGAAGCCCACAATATTCAAAGAGACAGGCTCCCCGTTTG ACGCAACACCCATCCACTCTATCAAGGTACGGCGGGACTTCACCCTCTCT ACTGTTATATAGGCAATCGTGATGTTCATGTTGTGTGTATAATAATAGTG CGGTGTAGGAGTGTCCTACGCGAATTCCCAGATCCATATGGGAGCAGCAA TAGCAGCAGCAGTAGCAGCAGCAGTAGAAGAAACAGCTATTTAGCAGTGC CTTCAAGAACTCTACCTATACAATAAGAGCGAAGAACACGCCCTCATCCA GATCCGTTGGAAGCTACTCATCTATGATTAAACTCGCGTCGTCGTGTGAT AAATTGCATGTGATAAGCTACACATGCAATTTGCGACAGTGTCGTCCTAA TTCCGATCATCATGACCACCATCAAACGTGTGAGCATTCAAAGGGGGAGA ACCTAAAGCATGCTAGCGAAAAGGGGGTGTCCCCCAGTGCAAAAGTTATC ACCTTTTTTACGCGTGGCTCGCTGCTTCCGCTCGGCGTAGGGATGATCGG TTTCCAGTAAATTAGATGTTCCGCATTTTGATCAACCTGTTGCTAAAGCT ATAACCAAAGGTTATACGAATTAGGCAAAGTATTCTTGACTATCTACTAT CTAAAGTAAGTGAACGACCCTCTAGTTGCTACTACAAAGCACAGGAAAAC ATTTTCCACGTTCAAGTTCGTGTTGAGGGCATCAAGTCTGCACTTCGACG AACGAACGCAACCCGAAACAGCCAGTCGGCTAATCGTTCACATCCAACTC CACTTTGAGGTCAAGAGTTTGTCCTCGTATCTACTGTTGACTCAATCCGC TTGCTCGCCCACCCCAACTCGAAACAACTGCGCAGCTCCGACCCGGCGGA CACGATACTCTCTCAGCCAAGCCAATTGATATCTCGGCATTCTCCTACTC GCGAAAGACGGCGCAACAAAATCCGCAGAGTTTCCTCAAGCGTGGAACTG GTAACGGCGGCACCGTGATTCCAGCGACTAGTCGCGCTGCAGGTGGCGGC CAGGAGGCAGGTTCACCTGCGAAAGAGCCTGTTGCTAAGGCCAAAGCAGC CGAAAAGAAGAACAAGATGCGAGATTTTCAGGCAAGTTCTGGTGATGTGG TCGTGGCTTCGCCTTGCTCGATACATGGACCGAGTTGATCATCCACAGCT TTATATATGTGTAGCTGTATGACATGTAGTTGTTGTTCTAGCGTCCTTGC CAATGTAGCGTCCTGGCTCACTTTCAGCCTGCAAAAGAAACTGCCTGCGG TAGAGGTTCCGAAACGGGCGTTTAGGAAATAGATTGTTTGCCCAATCAAG CTCAATATTGTACAAATACATGTTTTCCCACGACTTCGCGCTGGTCGATG CTGTGCTTTGTCAGATTACTCACACCCGACACACGTTTTGCTGGAATAAT ATATTTTCGACGCTTAGAAGTATGATCTGAAGACAGTGACTTGGGCACCG GCATGAATATGCCACAATACACCAGTCACTCTAGCACCGGTGAATGAGTG GCAGGTTATACCCTGGTTTCCCTCTACCTGGGGTCCCCACGTTGTGAATC AATACTCCCCACAGGAGCGAGTTCGATAGCGGAATTTGCAGAGACGGACC CCTTCAAATTCGATGAGCTGAATGAAGTACACTAGCTCTACAGTACACTG TCTCTTCAAGTATTTGGCATTTGCAGTATATATCGCTGGCTTTGCCCATG ACATCACCAGCCCCCTATACGGTACACGGTCATCACGCGATATTCAGCTG GATTTATTGGAAAAATTGCTTATTGCCCTCTTAACGGAAACGACAGGCGT TCGCAGAGCGCCCCAATCCGCCCAACACGGAATTTCGGAGGTTCTACGAG CGCGGAGACTTACCCGTGCAGATCGATCACGGGGGTGTGCACAACCGTAT CGCGTGGAAGGTCGATATTCAGAAGGTAGGTTTCCATTGCGTGGGATTTA GACTATGATACAAGAGGATTTCAGGTGGACAAAGCAGCGTGAGCATCGCT AATAACGGCGTCGGAGGTGCTGAATAACAAGAACTTGGTAGAGTTTTAAC TCTTTTTAGCGTATCCCAAGAACTCCGGGTGCGCTGCTCATTACGGTGGC GAACTATCACGCATTTCGAAGATGAAGAACCCCCCTCTCAGGCTAACGCG ATCGCCGCTGCACTCGCTGACGCATCAACCCTTATTACTTGTTTGGTCGT TTGGTCGTGGAACGAAACAAAAAAAGTTGGATTTCCATCACTATCTTCCA ATCTTCTTTGATGGACTGCGTGAGCTGGAGATGCCGTACGCCTTCCTAGC TGAACAGGGCGTGTACGATATGCTCAGCGCTGGGTCAAACAAGGTGCTGC CAGTCATCCCGCAGCTCATTATCCCTATTAAAAGTAAGTGGCTCCATGGG TGGGTAAAATATTAACCTTATAAGTGAAGGAAAAAATGAACAACGGAAGA TGAAGAAAAAGATAAACAATGTAAGATATTCGCGTATTCCTCATGTTTTC GCTACTAAAATCGTTTCCCATGTCATGATCGGGCGGGAGAAATGGAGAAT GTCAAGCAAGGAGCTCAAGCAGCCGCATAGCCGCATAGCCGCTCACCCGG AGCTCATTCTTGCCCTTTGTTTGATACGCTTCCACGTTTCCTTGACCGAA ACCATTCGGGGGTGTAGCCGCGCTTAACACTCGACAGAAGGGGGTAATAG TAAAGGTTCTGAAGGTACTCCAGGCGCTGGTGACGTGCGATCAGGGACCC GACGAACAGGGTCTGATTGGCCAGGCTCTTGTACCTTACTACCGCCAGAT CTTACCCGTCCTCAACATCTTCATTCGGCAAAACGGTGAGGATGCGTTTT TTGTTATTCCGCCTGGTCAGCGTAGTTTGCTTCTTGGTGCGTGCTCTTAT ACTGCATGGATGTTGGGCAACTAGTATATTTTATCGTGTTCTATATCAAG GGCCGTCCTAACGAGGCCGTTTTACCAGGGTGGCGCCTACCCCGCAGAGG AATAAATAACTCTATTCTGTTAAAGGAAATGTAGACATACTTTGGTAAAA TACTTGTAAAGTATGGAAGCATCGGTAAAGGTTTTTGCCTCAGCCTTCGG GGGGTTAAAAACAAAACAAAAAAACAAAACGAGGCCGTTTTTTGTCAGAT GTTTCCCATTTTTCCGTTTTCCGAAAAGTTGAATTCGCGATAACGAGATC AAAAGTGAGGGAAGGGTGCGGGAACAATGTAAAGCACGTTGTCCTCATAC GTCTGGTGCACCTCGATCATAATATATCGCGATTTCCATTCGTCGATACA CGGAAGAACGGAAAAAATCGGCCGGAAAACGATCTTGTTCGGAAAATGCC GAAGCAGCGTATAATTGTACCTCTTAACTATGAACACGACTTACGCTTAC CTTGCTGGAATTGAAACCATGGGGGAGTTGAAAACAAGAAGTTTGATCCT CCTCTGGGTTTGGTAGGTAACATGACAGGCTCCCCTTTACCACATCAAAT CAGATACCCGTGCCCCGACTGGTCGAAGCCGGAGGCCCCATCGCAGTGAT GAACATCCACCCGAAACAAGATATCAAACTACATGTAGATAAACGATTTT TCCCTCTGACAAGTCAACGATCAACAAACGCTTGTCTCGCCTGTTCCAGA CAACTTGGGAGACGGCATCGACTACGGCCAGCAGAGGCGGGAAAACCTTG GGGAACTGATAATGGAAACCCTCGAGGCGTTCGAGGTGAACGGCGGCGAG GACGCCTTCATCAACATCAAGTACCTCGTGCCTGTTTTCCAAAGCGTCGT CGTCAGCTGACACTAATTGTTTTCAGCGCCGTGAGGTGCTGATCATCTCT TGGAAGGTTTTTCCGACAGTACTGAAATTTTACTTTTTAATTGAAATTGC ACATACTATACG
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Coding sequence (CDS) from alignment at H-paniculata_contig421:18761..22822+

>mRNA_H-paniculata_contig421.10787.1 ID=mRNA_H-paniculata_contig421.10787.1|Name=mRNA_H-paniculata_contig421.10787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig421:18761..22822+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTATGAGGACTGTGAATGGTTCTATCAAGATCAGGGAGAAGCCCAC
AATATTCAAAGAGACAGGCTCCCCGTTTGACGCAACACCCATCCACTCTA
TCAAGATGACTATGAGGACTGTGAATGGTTCTATCAAGATCAGGGAGAAG
CCCACAATATTCAAAGAGACAGGCTCCCCGTTTGACGCAACACCCATCCA
CTCTATCAAGCTCCGACCCGGCGGACACGATACTCTCTCAGCCAAGCCAA
TTGATATCTCGGCATTCTCCTACTCGCGAAAGACGGCGCAACAAAATCCG
CAGAGTTTCCTCAAGCGTGGAACTGGTAACGGCGGCACCGTGATTCCAGC
GACTAGTCGCGCTGCAGGTGGCGGCCAGGAGGCAGGTTCACCTGCGAAAG
AGCCTGTTGCTAAGGCCAAAGCAGCCGAAAAGAAGAACAAGATGCGAGAT
TTTCAGCTCCGACCCGGCGGACACGATACTCTCTCAGCCAAGCCAATTGA
TATCTCGGCATTCTCCTACTCGCGAAAGACGGCGCAACAAAATCCGCAGA
GTTTCCTCAAGCGTGGAACTGGTAACGGCGGCACCGTGATTCCAGCGACT
AGTCGCGCTGCAGGTGGCGGCCAGGAGGCAGGTTCACCTGCGAAAGAGCC
TGTTGCTAAGGCCAAAGCAGCCGAAAAGAAGAACAAGATGCGAGATTTTC
AGGCGTTCGCAGAGCGCCCCAATCCGCCCAACACGGAATTTCGGAGGTTC
TACGAGCGCGGAGACTTACCCGTGCAGATCGATCACGGGGGTGTGCACAA
CCGTATCGCGTGGAAGGTCGATATTCAGAAGGCGTTCGCAGAGCGCCCCA
ATCCGCCCAACACGGAATTTCGGAGGTTCTACGAGCGCGGAGACTTACCC
GTGCAGATCGATCACGGGGGTGTGCACAACCGTATCGCGTGGAAGGTCGA
TATTCAGAAGTTGGATTTCCATCACTATCTTCCAATCTTCTTTGATGGAC
TGCGTGAGCTGGAGATGCCGTACGCCTTCCTAGCTGAACAGGGCGTGTAC
GATATGCTCAGCGCTGGGTCAAACAAGGTGCTGCCAGTCATCCCGCAGCT
CATTATCCCTATTAAAATTGGATTTCCATCACTATCTTCCAATCTTCTTT
GATGGACTGCGTGAGCTGGAGATGCCGTACGCCTTCCTAGCTGAACAGGG
CGTGTACGATATGCTCAGCGCTGGGTCAAACAAGGTGCTGCCAGTCATCC
CGCAGCTCATTATCCCTATTAAAACCGCGCTTAACACTCGACAGAAGGGG
GTAATAGTAAAGGTTCTGAAGGTACTCCAGGCGCTGGTGACGTGCGATCA
GGGACCCGACGAACAGGGTCTGATTGGCCAGGCTCTTGTACCTTACTACC
GCCAGATCTTACCCGTCCTCAACATCTTCATTCGGCAAAACGCCGCGCTT
AACACTCGACAGAAGGGGGTAATAGTAAAGGTTCTGAAGGTACTCCAGGC
GCTGGTGACGTGCGATCAGGGACCCGACGAACAGGGTCTGATTGGCCAGG
CTCTTGTACCTTACTACCGCCAGATCTTACCCGTCCTCAACATCTTCATT
CGGCAAAACGACAACTTGGGAGACGGCATCGACTACGGCCAGCAGAGGCG
GGAAAACCTTGGGGAACTGATAATGGAAACCCTCGAGGCGTTCGAGGTGA
ACGGCGGCGAGGACGCCTTCATCAACATCAAGTACCTCGTGCCTGTTTTC
CAAAGCGTCGTCGTCAGCTGAACAACTTGGGAGACGGCATCGACTACGGC
CAGCAGAGGCGGGAAAACCTTGGGGAACTGATAATGGAAACCCTCGAGGC
GTTCGAGGTGAACGGCGGCGAGGACGCCTTCATCAACATCAAGTACCTCG
TGCCTGTTTTCCAAAGCGTCGTCGTCAGCTGA
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