mRNA_H-paniculata_contig4209.10784.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 231 bits (588), Expect = 5.600e-69 Identity = 115/208 (55.29%), Postives = 150/208 (72.12%), Query Frame = 1
Query: 1 GVTPQGTKAKKVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAWVQGGD-PPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
G TPQGTK KVIAE QKVVG RSNS +NVTVV TI+A G P ++++G R+QA WV+G + PP + A TDSSFMQG VFV Y++ FH+ ++D G +G PH+L LDGH SH+T++V+K+A NI L+Q+PSHSSH+ QPL V +FG FK EIT VL FP RNGG++ KSD++ ++ DA+ SF+ Q +SF GA LWP
Sbjct: 180 GSTPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWP 387
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 223 bits (569), Expect = 4.330e-68 Identity = 111/208 (53.37%), Postives = 147/208 (70.67%), Query Frame = 1
Query: 1 GVTPQGTKAKKVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAWVQGGD-PPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
G T QGTK KVI E QKV G RSNS ENVTVV TI+A G P ++++G R+QA WV+G + PP + A DSSFMQG VFV Y++ FH+ ++D G +G PH+L LDGH SH+T++V+K+A NI L+Q+PSHSSH+ QPL V +FG FK+EIT VL FP RNGG++ KSD++ ++ DA+ SF+ + +SF GA LWP
Sbjct: 172 GSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAGAGLWP 379
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5K717_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K717_9PHAE) HSP 1 Score: 216 bits (549), Expect = 5.070e-68 Identity = 107/198 (54.04%), Postives = 142/198 (71.72%), Query Frame = 1
Query: 31 KVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAWVQGGD-PPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
KVIAE QKVVG RSNS ENVTVV TI+ G P ++++G R+QA WV+G + PP + A TDSSFMQG FV Y++ FH+ ++D +G PH+LALDGH SH+T++V+K+A NI L+Q+PSHSSH+ QPL V +FG FK+EIT VL FP RNGG++ KSD++ ++ DA+ SF+ Q +SF GA LWP
Sbjct: 2 KVIAESGQKVVGAMRSNSRENVTVVVTISTAGATLAPWIIYKGQRLQADWVEGRNGPPNARLAVTDSSFMQGIAFVNYVRDFHRQLLDRDLINGTPHVLALDGHASHVTYEVVKLARELNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFVGAGLWP 199
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 227 bits (579), Expect = 3.520e-67 Identity = 114/208 (54.81%), Postives = 148/208 (71.15%), Query Frame = 1
Query: 1 GVTPQGTKAKKVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAWVQGGD-PPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
G T QGTK K IAE QKVVG RSNS E VTVV TI+A G P ++++G R+QA WV+G + PP + A TDSSFMQG VFV Y++ FH+ ++D G +G PH+L LDGH SH+T++VIK+A NI L+Q+PSHSSH+ QPL V +FG FK+EIT VL FP RNGG++ KSD++ ++ DA+ SF+ Q +SF GA LWP
Sbjct: 172 GSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWP 379
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE) HSP 1 Score: 220 bits (561), Expect = 1.850e-66 Identity = 116/208 (55.77%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 1 GVTPQGTKAKKVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAW-VQGGDPPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
G TPQGTK K AE QKVV + RSNS EN TVV TI+ G P ++F+G R+Q W + P + Y TDSSFMQG VF+ Y+K F+K + D G DGKPH+L L GH S ++++VIK+AM NI LFQLPSH+SHITQPL V AFG FKKE+T VLQ + NGG + +K DV VI A+Q SFTP + KASF GA LWP
Sbjct: 109 GTTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWP 316
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 221 bits (562), Expect = 2.210e-66 Identity = 116/208 (55.77%), Postives = 140/208 (67.31%), Query Frame = 1
Query: 1 GVTPQGTKAKKVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAWVQG-GDPPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
G T QGT+ ++V+AE+ Q VV RS S EN T+V TINA G V P ++F+G R WV PPG+ Y T+SSFM G VF+ Y+K FHK + D DGKPH+L LDGH SH+T DVIK+A+S NI L QLPSH SHITQPL VA FG FKKE+ V+Q FP RNGG + K D+ +I A+ SSFTP KASF GA LWP
Sbjct: 186 GGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWP 393
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.030e-65 Identity = 117/208 (56.25%), Postives = 140/208 (67.31%), Query Frame = 1
Query: 1 GVTPQGTKAKKVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAW-VQGGDPPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
G TPQGTK K AE QKVV + RSNSLEN TVV TI+A G P ++F+G R+Q W + P + Y TDSSFMQG VF+ Y+K FHK + D G DGKPH L LDGH SH++++VIK+AM NI LFQLPSH+SHITQPL V AFG FKKE+T VLQ + NGG + +K DV VI A+Q S T + ASF GA L P
Sbjct: 166 GPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRP 373
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 213 bits (542), Expect = 1.100e-64 Identity = 110/198 (55.56%), Postives = 137/198 (69.19%), Query Frame = 1
Query: 31 KVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAW-VQGGDPPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
K AE QKVV + RSNS EN TVV TI+A G P ++F+G R+Q W + P + Y TDSSFMQG VF++Y+K FHK + D G DGKPH+L LDGH SH++++ IK+AM NI LF+LPSH+SHITQPL V AFG FKKE+T VLQ + NGG + +K DV VI A+Q+S TP + KASF GA LWP
Sbjct: 2 KAFAEAGQKVVESMRSNSRENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWP 199
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE) HSP 1 Score: 214 bits (544), Expect = 2.040e-63 Identity = 114/207 (55.07%), Postives = 140/207 (67.63%), Query Frame = 1
Query: 7 TPQGTKAKKVIAEKRQKVVGTKRSNSLENVT-VVATINATGKVTPPLLMFRG*RVQAAW-VQGGDPPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLWP 621
TPQGTK K AE QKVVG+ RSNS EN T VV TI+A G P ++F+G R+QA W V+ P G+ Y TDSSFMQG VF+ Y+K FHK + G DGKPH+L LDGH SH+ +V ++AM+ I L QLPSH+SHITQPL V AFG FKK +T VL F +GG + +K D+ VI DA++ SFTP K+SF GA LWP
Sbjct: 148 TPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWP 354
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE) HSP 1 Score: 214 bits (545), Expect = 5.060e-63 Identity = 108/207 (52.17%), Postives = 144/207 (69.57%), Query Frame = 1
Query: 1 GVTPQGTKAKKVIAEKRQKVVGTKRSNSLENVTVVATINATGKVTPPLLMFRG*RVQAAWVQGGD-PPGSLYASTDSSFMQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFNIELFQLPSHSSHITQPLHVAAFGIFKKEITSVLQLFPRRNGGKMLVKSDVVEVIKDAFQSSFTPSQVKASFEGASLW 618
G TPQGTK KVIAE QKVVG S S ENVTVV TI+ G P ++++G R+QA W +G + PP + A T+SSFMQG VFV Y++ FH+ ++D G +G PH+L LDGH SH+T++V+K+A NI L+Q+PSHSSH+ QPL V +FG FK+EI VL F RNGG++ KSD++ ++ DA+ SF+ Q +SF GA LW
Sbjct: 131 GSTPQGTKTMKVIAESGQKVVGAIHSKSRENVTVVVTISTVGATLAPWIIYKGQRLQADWAKGRNAPPNARLAVTNSSFMQGIVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLW 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4209.10784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4209.10784.1 >prot_H-paniculata_contig4209.10784.1 ID=prot_H-paniculata_contig4209.10784.1|Name=mRNA_H-paniculata_contig4209.10784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp MQGPVFVIYMKAFHKYIVDTGKDDGKPHMLALDGHPSHLTFDVIKMAMSFback to top mRNA from alignment at H-paniculata_contig4209:7580..8200- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4209.10784.1 ID=mRNA_H-paniculata_contig4209.10784.1|Name=mRNA_H-paniculata_contig4209.10784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=621bp|location=Sequence derived from alignment at H-paniculata_contig4209:7580..8200- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4209:7580..8200- >mRNA_H-paniculata_contig4209.10784.1 ID=mRNA_H-paniculata_contig4209.10784.1|Name=mRNA_H-paniculata_contig4209.10784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig4209:7580..8200- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |