prot_H-paniculata_contig4204.10778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4204.10778.1
Unique Nameprot_H-paniculata_contig4204.10778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length422
Homology
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BLAST of mRNA_H-paniculata_contig4204.10778.1 vs. uniprot
Match: A0A6H5JLL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL1_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 5.740e-59
Identity = 121/262 (46.18%), Postives = 156/262 (59.54%), Query Frame = 0 
Query:   75 GMENTLVMAFLVPKTNEEVGNTQKPLRQEMPYKSLFNALNDLCQTRHLLMLAPGFRLGRGTEKVVANALAAPLEKPRVLVIPQWCIDPEPK--SKAMPSLDIEDARRRAGEGTAGLCHERAKINEKGY--------------QNVWLGAALA-HEPDKNEAEVRNGRSLLRSDMINPVIVVDMWSAPALFLRHVEEFTRSQCFDGAYARGLWTAGFSFAVLPEALSFYVASQLPSNGMGCRAGAETPAVAYSLFLKSIRQVY 319
            G++N  ++ F  P +     N        +P K+L NA+ DLCQTRHLL+L   FR+ RG E+ V  AL  P E PRVL+IPQWC+D + +  S  +P+L++ED RR+A +GTA LC    + N   Y                  LG A A H         +NG +LL SD ++PVIVVDMWSAPALFLRH+EE + S+CFDGAYARGLW AGFSF VLPEA +F  ++ LP     CR G      AYS FL+ +R+VY
Sbjct:  685 GLDNAYIVFFFSPSSGGHEVNGG-----HLPTKALLNAVGDLCQTRHLLILPSDFRIARGAEQAVVTALKTPTEAPRVLIIPQWCVDRDHERGSGELPTLELEDLRRQAADGTADLCFSDTRANRDLYLGGSVLEGAVYGEGAGEGLGDAGARHRGMGGTRTTKNGLALLLSDAVSPVIVVDMWSAPALFLRHIEELSGSRCFDGAYARGLWAAGFSFEVLPEAAAF--SASLPPRTDQCRHGVMVQMGAYSTFLQDVRRVY 939
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4204.10778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JLL1_9PHAE5.740e-5946.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..421
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4204contigH-paniculata_contig4204:11545..14184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4204.10778.1mRNA_H-paniculata_contig4204.10778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4204 11328..16371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4204.10778.1 ID=prot_H-paniculata_contig4204.10778.1|Name=mRNA_H-paniculata_contig4204.10778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=422bp
MPVPIGGVGNFVFYALFVTFVHSFGYLFGVLTVAVPPSVFLCRLGQILVL
ILSVLDADEVMTRLVEEEGLEDSCGMENTLVMAFLVPKTNEEVGNTQKPL
RQEMPYKSLFNALNDLCQTRHLLMLAPGFRLGRGTEKVVANALAAPLEKP
RVLVIPQWCIDPEPKSKAMPSLDIEDARRRAGEGTAGLCHERAKINEKGY
QNVWLGAALAHEPDKNEAEVRNGRSLLRSDMINPVIVVDMWSAPALFLRH
VEEFTRSQCFDGAYARGLWTAGFSFAVLPEALSFYVASQLPSNGMGCRAG
AETPAVAYSLFLKSIRQVYSNARTTSTNNVDQFRLMNKGYDRYPATPFKG
KVKHSRKSMKKRFRTRGSVEQAPDTSGDGRMKFDRQRDTGSADIIIKHRR
GSEPIGRLPQQPSDGANADVE*
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