prot_H-paniculata_contig420.10771.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig420.10771.1
Unique Name	prot_H-paniculata_contig420.10771.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	347

Homology

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: A0A2P6V1L4_9CHLO (Ribonuclease P subunit p25 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1L4_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 1.790e-26
Identity = 72/158 (45.57%), Postives = 89/158 (56.33%), Query Frame = 0

Query:   21 NEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEEL 178
            NEVRIT QGK+  YIS+  SLLTEKG  ++ +KA+G+AINK +TIAEI+KRR+ GLHQ + ISS EL         +W PK     E+G+D                               ++ TTR VSVI ITLS  PLDTS  GYQ PLP  E+
Sbjct:   19 NEVRITSQGKSRSYISYGTSLLTEKGHSAVVLKAMGKAINKTVTIAEIMKRRIVGLHQCTAISSVELKD-------HWEPK-----EEGLD-------------------------------RIETTRHVSVITITLSKEPLDTSLPGYQPPLPESEV 133

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: A0A7J7PXC7_9CHLO (DNA/RNA-binding protein alba-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PXC7_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 6.010e-23
Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEEL 178
            + +NEVRIT   K   YI++A +LL EKG  S+ +K +G+AINK + +AEI+KRR+ GLHQI++  ST +          W PK     E+G+D                               ++ TTRRVSVI ITLS  PLD+S++GYQ PLP +++
Sbjct:   16 IQENEVRITAVNKVRNYITYAMALLEEKGHSSVVLKGMGKAINKTVVVAEIIKRRMVGLHQITETCSTNIVDV-------WEPK-----EEGLD-------------------------------RLETTRRVSVITITLSREPLDSSNVGYQPPLPEDQV 133

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: A0A383WIK4_TETOB (Alba domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WIK4_TETOB)

HSP 1 Score: 105 bits (262), Expect = 7.610e-23
Identity = 64/161 (39.75%), Postives = 88/161 (54.66%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEEL 178
            + +NEVRIT   K   YIS+A +LL EKG  S+ +K +G+AINK + +AEILKRR+ GLHQ++ I+ST +          W PK     E+G+D                               ++ TTRRVSVI I LS  PLD+S +GYQ PLP +++
Sbjct:   16 IQENEVRITAVNKVRNYISYAMALLEEKGHSSVVLKGMGKAINKTVVVAEILKRRMVGLHQLTSIASTNIVDV-------WEPK-----EEGLD-------------------------------RLETTRRVSVITIILSREPLDSSDVGYQPPLPEDQV 133

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: A0A2U1PXI8_ARTAN (DNA/RNA-binding protein Alba-like protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PXI8_ARTAN)

HSP 1 Score: 105 bits (261), Expect = 1.170e-22
Identity = 64/164 (39.02%), Postives = 87/164 (53.05%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEELNLA 181
            + +NE+RIT QG+   YI++A +LL EKG+  I  KA+GRAINK +TI E++KRR+ GLHQI+ I ST++          W P      E+G+                                 + TTR VSVI ITLS   LDTS IGYQ PLP +++  +
Sbjct:   16 INENEIRITSQGRMRNYITYAMALLQEKGSSEIVFKAMGRAINKTVTIVELIKRRIVGLHQITSIGSTDITDT-------WEPL-----EEGL-------------------------------LPIETTRHVSVITITLSTKELDTSSIGYQPPLPADQVKAS 136

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: UPI000C1D5FF5 (ribonuclease P protein subunit p25-like protein n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D5FF5)

HSP 1 Score: 104 bits (260), Expect = 1.470e-22
Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEELNL 180
            + +NE+RIT QG+   YI++A +LL EKG+  I +KA+GRAINK +TI E++KRR+ GLHQI+ I ST++          W P      E+G+                               + + TTR+VSV++ITLS   LDT ++GYQ PLP +++ +
Sbjct:   16 INENEIRITSQGRMRNYITYAMTLLEEKGSDEILLKAMGRAINKTVTIVELIKRRIVGLHQITAIQSTDITDT-------WEPL-----EEGL-------------------------------QTLETTRKVSVVSITLSKKELDTRNVGYQPPLPADQVKV 135

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: UPI001CB8EDB6 (RGG repeats nuclear RNA binding protein A-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8EDB6)

HSP 1 Score: 104 bits (260), Expect = 1.880e-22
Identity = 64/164 (39.02%), Postives = 88/164 (53.66%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEELNLA 181
            + +NE+RIT QG+   YI++A SLL EKG+  I  KA+GRAINK +TI E++KRR+ GLHQI+ I ST++          W P      E+G+                                 + TTR VS+I ITLS   L+TS IGYQ PLP +++ +A
Sbjct:   16 IDENEIRITSQGRMRNYITYAMSLLQEKGSSEIVFKAMGRAINKTVTIVELIKRRIVGLHQITSIGSTDITDT-------WEPL-----EEGL-------------------------------LPLETTRHVSMITITLSMKELNTSSIGYQPPLPADQVKVA 136

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: A0A6A6LD01_HEVBR (Alba domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LD01_HEVBR)

HSP 1 Score: 104 bits (259), Expect = 1.990e-22
Identity = 69/174 (39.66%), Postives = 90/174 (51.72%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPE------ELNLAGGGG 185
            + +NE+RIT QG+   YIS+A SLL EKG+  I  KA+GRAINK +TI E++KRR+ GLHQI+ I ST++          W P      E+G+                                 + TTR VS+I ITLS   L+TS +GYQSPLP E      E +  GG G
Sbjct:   16 IDENEIRITSQGRMRSYISYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQITAIGSTDITDT-------WEPL-----EEGL-------------------------------LPLETTRHVSMITITLSMKELNTSAVGYQSPLPAELVKGSAEFDYEGGNG 146

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: UPI001FB0C7C0 (ribonuclease P protein subunit p25-like protein n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0C7C0)

HSP 1 Score: 105 bits (261), Expect = 2.270e-22
Identity = 81/231 (35.06%), Postives = 108/231 (46.75%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEELNLAGG----GGRGAMRGRPPSDRGGYTGRGRGRGWSRQPRCRIGGF------PMERSSASW--NRGFVVG 236
            + +NE+RIT QG+   YI++A SLL +KG+  I  KA+GRAINK +TI E++KRR+ G+HQ++ I ST++          W P      E+G++                                V TTR VS+I ITLS   LD S +GYQ P+P EE+  A      GG  +  G          GRGRGRG          G+      P E     W  NRGF  G
Sbjct:   16 IEENEIRITSQGRMRNYITYAMSLLQDKGSNEIVFKAMGRAINKTVTIVELIKRRIVGIHQVTSICSTDITDV-------WEPI-----EEGLNP-------------------------------VETTRHVSMITITLSKMELDVSSVGYQPPIPAEEVRTAPEFDYEGGEESPSG----------GRGRGRGRRXXXXXXXXGYGNGFIAPNEYEEGGWDRNRGFARG 193

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BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: A0A059BXZ3_EUCGR (Alba domain-containing protein n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BXZ3_EUCGR)

HSP 1 Score: 103 bits (256), Expect = 4.990e-22
Identity = 64/165 (38.79%), Postives = 86/165 (52.12%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEELNLAG 182
            + +NE+RIT QG+   YI++A  LL EKG+  I  KA+GRAINK +TI E++KRR+ GLHQI+ I ST++          W P      E+G+                                 + TTR VS+I ITLS   LDTS +GYQ PLP E++   G
Sbjct:   16 IDENEIRITSQGRMRSYITYAMGLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQITTIGSTDITDT-------WEPL-----EEGL-------------------------------LPLETTRHVSMITITLSKNELDTSSVGYQLPLPAEQVKALG 137

[Close]

BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Match: A0A2U1LDM8_ARTAN (DNA/RNA-binding protein Alba-like protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LDM8_ARTAN)

HSP 1 Score: 103 bits (256), Expect = 5.420e-22
Identity = 63/164 (38.41%), Postives = 87/164 (53.05%), Query Frame = 0

Query:   18 LTKNEVRITQQGKTHMYISHAQSLLTEKGAGSITIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAPKQQQEEEDGVDADKYSXXXXXXXXXXXXXXXXXXXXXXXXDEKVATTRRVSVIAITLSFAPLDTSHIGYQSPLPPEELNLA 181
            + +NE+RIT QG+   YI++A +LL EKG+  I  KA+GRAINK +TI E++KRR+ GLHQI+ I ST++          W P      E+G+                                 + TTR VS+I ITLS   LDTS IGYQ PLP +++  +
Sbjct:   16 IQENEIRITSQGRMRNYITYAMTLLEEKGSSEIVFKAMGRAINKTVTIVELIKRRIVGLHQITSIGSTDITDT-------WEPL-----EEGL-------------------------------LPIETTRHVSLITITLSKKELDTSSIGYQPPLPADQVKAS 136

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig420.10771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2P6V1L4_9CHLO	1.790e-26	45.57	Ribonuclease P subunit p25 n=1 Tax=Micractinium co...	[more]
A0A7J7PXC7_9CHLO	6.010e-23	39.13	DNA/RNA-binding protein alba-like protein n=1 Tax=...	[more]
A0A383WIK4_TETOB	7.610e-23	39.75	Alba domain-containing protein n=2 Tax=Tetradesmus...	[more]
A0A2U1PXI8_ARTAN	1.170e-22	39.02	DNA/RNA-binding protein Alba-like protein n=1 Tax=...	[more]
UPI000C1D5FF5	1.470e-22	37.42	ribonuclease P protein subunit p25-like protein n=...	[more]
UPI001CB8EDB6	1.880e-22	39.02	RGG repeats nuclear RNA binding protein A-like n=1...	[more]
A0A6A6LD01_HEVBR	1.990e-22	39.66	Alba domain-containing protein n=1 Tax=Hevea brasi...	[more]
UPI001FB0C7C0	2.270e-22	35.06	ribonuclease P protein subunit p25-like protein n=...	[more]
A0A059BXZ3_EUCGR	4.990e-22	38.79	Alba domain-containing protein n=3 Tax=Myrtoideae ...	[more]
A0A2U1LDM8_ARTAN	5.420e-22	38.41	DNA/RNA-binding protein Alba-like protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	PANTHER	PTHR13516:SF14	ALBA DNA/RNA-BINDING PROTEIN	coord: 18..87 coord: 144..317
None	No IPR available	PANTHER	PTHR13516	RIBONUCLEASE P SUBUNIT P25	coord: 18..87 coord: 144..317
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 21..85 e-value: 1.9E-19 score: 69.3
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 16..110 e-value: 5.1E-21 score: 76.4
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 20..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig420	contig	H-paniculata_contig420:32654..38185 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig420.10771.1	mRNA_H-paniculata_contig420.10771.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig420 32091..38231 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig420.10771.1 ID=prot_H-paniculata_contig420.10771.1|Name=mRNA_H-paniculata_contig420.10771.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp
MATSTAPNENSSGGSRTLTKNEVRITQQGKTHMYISHAQSLLTEKGAGSI
TIKALGRAINKAITIAEILKRRVPGLHQISDISSTELACAPQQQIVNWAP
KQQQEEEDGVDADKYSEEEGKSSQQEAEEEHKGRIDEMEKDEKVATTRRV
SVIAITLSFAPLDTSHIGYQSPLPPEELNLAGGGGRGAMRGRPPSDRGGY
TGRGRGRGWSRQPRCRIGGFPMERSSASWNRGFVVGADSAGCSEIGLAFQ
LPFQLGQQPPAAAPLSAQEAWSNHSFAHGQNYAQYGQVPPGTVQSQQQQQ
QQQQQQQHSSSSSSRSKRSLPQRSLRLRHLHPNTPRSRRWGTRRSE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002775	DNA/RNA-bd_Alba-like
IPR036882	Alba-like_dom_sf