mRNA_H-paniculata_contig42.10768.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: D7FT60_ECTSI (Nitroreductase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT60_ECTSI) HSP 1 Score: 374 bits (959), Expect = 2.110e-121 Identity = 179/249 (71.89%), Postives = 220/249 (88.35%), Query Frame = 3
Query: 435 EGDSEAFERITLARCATKFFDEK-PVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLGSNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQDAKSLRFAPEEVYHREDFGIPMEGIPKL 1178
+ D+EAFER+TLAR +TK FD + PVP+DVLK+VLALVLRAPSGFN+QPY+CIVVTSDEAK KLS+ MLG N++RVL AGA+V+FA+DLNSMKN+ KLTT+LA+ G FI+KVPLY S+FSTGHNRL+R+P+ KK++F V+RRLGKGMPT++GAE WAFK+TMLAVQELLLAAT+HGLA+CPMEGFDMRRLRK RIPLRYS+PIVVSIGY S+++++ K+LRF PEEV HRE+FG P+EG+P L
Sbjct: 69 DSDAEAFERVTLARRSTKHFDRRRPVPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLSRAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAKEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLRFPPEEVLHREEFGTPLEGVPSL 317
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A835Z5B9_9STRA (Nitroreductase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B9_9STRA) HSP 1 Score: 263 bits (673), Expect = 9.040e-80 Identity = 128/240 (53.33%), Postives = 176/240 (73.33%), Query Frame = 3
Query: 444 SEAFERITLARCATKFFDEKPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLGSNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQDAK-SLRFAPEEVYHREDFGIPM 1160
S+AF+ I+ AR A K F +PVP +VL+ +L + LRAPS FN+QPY+ +V+ S ++KQ LSK ML +N++RVL+AGA+V+FAAD N MK++GK+ + E G F+RK+PLY ++FS+GHNR++R MT K++ F + RRLG +P + AE WAFKNTMLAV+ +LAA A+GLA+CPMEGFD R+LRKQF IP RYS+P+VVSIGY + K S RF PE+V++ +G M
Sbjct: 12 SQAFKAISDARYANKEFSPEPVPAEVLQDLLQVTLRAPSAFNVQPYKALVINSPQSKQLLSKAMLSTNKKRVLDAGATVVFAADKNCMKDIGKVVDMFKEGGSNAAFVRKIPLYVAVFSSGHNRVLRPIMTFIKQVVFSIARRLGLELPPVNSAEAWAFKNTMLAVEAFMLAAAANGLATCPMEGFDPRQLRKQFHIPRRYSVPVVVSIGYPKPSDRPLKQSRRFPPEQVFYDNQWGQGM 251
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A6H5L6J9_9PHAE (Nitroreductase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J9_9PHAE) HSP 1 Score: 196 bits (499), Expect = 3.670e-56 Identity = 92/127 (72.44%), Postives = 111/127 (87.40%), Query Frame = 3
Query: 732 LLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQDAKSLR 1112
+LAE G FI KVPLY S+FSTGHNRL+R+P+ KK++F V+RRLGKGMPT++GAE WAFKNTMLAVQELLLAAT+HGLA+CPMEGFDMRRLRK RIPLRYS+PIVVSIGY S+++++ K+LR
Sbjct: 1 MLAEEGWPKGFINKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLR 127
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A4D9D236_9STRA (Nitroreductase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D236_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.310e-47 Identity = 105/259 (40.54%), Postives = 152/259 (58.69%), Query Frame = 3
Query: 453 FERITLARCA-TKFFDEKPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLS-KGMLGSNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPE-FIRKVPLYASLFSTGHN-RLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYAS----------------EEKQDAKSLRFAPEEVYHREDFGIPMEGI 1169
F +I +R + T + KPV L ++L L RAPS FN+QP++ +V+ + K++ + MLG+N RV A +V+FAAD+ S + M ++ LL +AG PE F+ K+P +A+LFSTG+ L+R + K++A V+ K +P + ETWA KNTMLA +LAA++H L +CPMEGFD RRLR +P RY +P+VVS+GYA+ KQ SLRF EEV E +G P +G+
Sbjct: 25 FSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKIAHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLNKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWF-KAVPRLERPETWAVKNTMLAAMTFMLAASSHSLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 282
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A6V1NJ53_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJ53_HETAK) HSP 1 Score: 172 bits (437), Expect = 1.700e-44 Identity = 88/236 (37.29%), Postives = 148/236 (62.71%), Query Frame = 3
Query: 447 EAFERITLARCATKFFDEKPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLG-SNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASE-EKQDAKSLRFAPEEVYHREDF 1148
E F + + R + + F P+P++ + ++ L RAPSGFN+QPY ++V S+E K+ L+ MLG SN++RVLEA + +FA+DL +++++ ++ LL G + ++FS GH L+R+P I +K+AF + + P ++ ETWA KNTMLAVQ +LA+ A+GL + PMEG+D RR+R+ ++P R+++P+VV+ GY + +++ A S R+ + V + F
Sbjct: 74 EPFREVVMGRRSVRKFLPNPIPDETMDHIIDLTQRAPSGFNVQPYVIVLVKSEETKRALADAMLGASNKRRVLEAPVTAVFASDLENLRHVRRVEGLLRAQGLPKAAVDLARPGLTIFSGGHRALLRLPSLIVRKLAFRPVSLI-TASPKVSTPETWAVKNTMLAVQNYMLASVAYGLNTAPMEGYDARRVRRALKLPRRFTVPLVVATGYPGDLDEEAAPSARWPRDRVVFSDRF 308
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A7S0WR52_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WR52_9CHLO) HSP 1 Score: 171 bits (433), Expect = 6.470e-44 Identity = 107/273 (39.19%), Postives = 152/273 (55.68%), Query Frame = 3
Query: 390 AKVASGTLVAKAVVMEGDSEAFERITLARCATKFFDE-KPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLGS-NQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKV-PLYASLFSTGHNRLVRIPMT---------IFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQDAKSLRFAPEEVYHREDFGIPMEGIP 1172
A ASG V K +E D E FER+ R K +D+ + +P L++ L L LRAP+ FN QPY +VV D+ KQ LS+ MLG N RVL+A A+V+FAAD N M+N+ K+ L + G F++ + PLY +LFS G RIP + +K+A I +PT + AE W+ KN M +LAA+A GL + PMEG+D RR+R +P YS+ + VS+GY + + +S RF +++ +R FG GIP
Sbjct: 80 ASTASGK-VDKVETVETDLEGFERVVKGRYTNKVYDKTRAIPAGFLEKCLGLCLRAPTSFNTQPYIALVVDDDKTKQALSECMLGEGNINRVLDAPATVVFAADNNCMRNVPKVMDLWLKDGAPAGFVKTLLPLYVALFSNGFGFFGRIPFIGSLINLIVYLVRKVALS-IASFFTCVPTPSTAEAWSMKNAMFPATIFMLAASAAGLTTSPMEGYDSRRVRSALNLPGHYSVALAVSVGYPPAQ-ETRRSSRFDSKDLVYRNTFGQEFPGIP 349
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A6S8C805_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8C805_9STRA) HSP 1 Score: 165 bits (417), Expect = 6.130e-42 Identity = 90/221 (40.72%), Postives = 135/221 (61.09%), Query Frame = 3
Query: 435 EGDSEAFERITLARCATKFFD-EKPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLGSNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQ 1094
+ D+EAF RI R TK FD K VP + L+++L+L RAPS FN+QPY+ ++V + K++++ M +N ++VL A +++FA+DL + + K+ L E G + ++ A++F N ++ KK F I ++ + MPTI +E WAFKNTM A Q +L A+GLA+ PMEGFD RR+R IP RY IP+VVS+GY SEE++
Sbjct: 57 DADAEAFSRIVKNRTCTKEFDPSKSVPLETLEKILSLTQRAPSSFNLQPYKAVIVRDEIVKKRVAYCMTDNNIKKVLNASLTLVFASDLKPGQEIDKIMALEREHGLPEQVVKARKFGATVFVGSSNEAEKV----VKKTLFSTISQVTQ-MPTINSSEGWAFKNTMTAAQTFILGCHAYGLATAPMEGFDARRIRDALYIPDRYEIPVVVSVGYPSEEEK 272
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A024U8C5_9STRA (Nitroreductase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8C5_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.460e-41 Identity = 90/240 (37.50%), Postives = 132/240 (55.00%), Query Frame = 3
Query: 444 SEAFERITLARCATKFFDEKPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLGSNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLG--KGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQDAKSLRFAPEEVYHREDFGIP 1157
++AF + R + F K +P+D+LK +L RAPSGFN+QPY C++V + LS MLG N ++V EA +FAADL K + + ++A AG++ I+++PL F G L + I G+ L + +PT W++K+TMLAV + +LAA +HG+ SC MEGFD +R IP RYS+P+VV+ GYA+ E S R P +V+ FG P
Sbjct: 3 AQAFRSLARQRRSLYKFQNKDIPKDILKDILLTTQRAPSGFNLQPYACMLVQDPTDRNALSAAMLGDNVRKVKEAPLIAVFAADLEPSKRVPAIQEMMATAGQSTADIQQLPLKLRFFG-GEGHLAGV-------IRSGISTALTPFQPVPTYVPTIAWSYKSTMLAVSQYILAAESHGIGSCVMEGFDETWVRHALDIPDRYSVPVVVASGYAAAENSQPPSPRLDPSQVFFGAKFGAP 234
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: A0A3R7NF45_9STRA (Nitroreductase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NF45_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.570e-41 Identity = 92/233 (39.48%), Postives = 126/233 (54.08%), Query Frame = 3
Query: 474 RCATKFFDEKPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLGSNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQDAK-SLRFAPEEVYHREDFGIPMEGI 1169
R A K F PVPE L+++L L LRAP+GFN QPY C+VV ++KL++ M+ SN ++V EA V+FAAD K + +L L A+ G + + + +P LFS I I ++ + P+ E WAFK T A LL AA HG+A+CPMEGFD R+R IP RY IP+V+++GY + K S+R P EV+ FG EGI
Sbjct: 37 RYACKAFLPDPVPEQTLQEILKLTLRAPTGFNTQPYACVVVRKQADREKLAEAMMASNVRKVKEAPVVVVFAADCEPTKRVPRLQKLAADNGASTDLVNNLPHVVRLFSGEGVAASGIRAAIATAVS------PLQPAPSNVSTEAWAFKQTTFAAATLLYAAQEHGVATCPMEGFDQIRVRNALDIPDRYGIPVVIALGYPNPATAPTKPSVRLQPTEVFFDGKFGQSSEGI 263
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Match: D0NC21_PHYIT (Nitroreductase family, putative n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NC21_PHYIT) HSP 1 Score: 161 bits (407), Expect = 6.940e-41 Identity = 91/233 (39.06%), Postives = 135/233 (57.94%), Query Frame = 3
Query: 474 RCATKFFDEKPVPEDVLKQVLALVLRAPSGFNMQPYQCIVVTSDEAKQKLSKGMLGSNQQRVLEAGASVIFAADLNSMKNMGKLTTLLAEAGEAPEFIRKVPLYASLFSTGHNRLVRIPMTIFKKIAFGVIRRLGKGMPTIAGAETWAFKNTMLAVQELLLAATAHGLASCPMEGFDMRRLRKQFRIPLRYSIPIVVSIGYASEEKQDAK-SLRFAPEEVYHREDFGIPMEGI 1169
R A K F PVP++ LK++L L LRAP+GFN+QPY C++V + ++KL++ M+ SN ++V EA +FAADL K + +L L + G + +F+ +P + LFS G + + IA V L +P+ E WAFK T LA L AA AH LA+CPMEGFD R+R IP RY +P+V+++G+A+ + + K S+R P E++ FG + I
Sbjct: 68 RYACKAFLPAPVPDETLKEILKLTLRAPTGFNVQPYACVLVREPKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQQLAHDNGASADFVANLPHFVRLFS-GEGV---VASGLRAAIATAVSPLLP--VPSNVSTEAWAFKQTALAAATFLYAAQAHDLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHANPDAKPQKPSVRLDPTEIFFDGKFGNSSDKI 294 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42.10768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42.10768.1 >prot_H-paniculata_contig42.10768.1 ID=prot_H-paniculata_contig42.10768.1|Name=mRNA_H-paniculata_contig42.10768.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp MYLPKKCGASAWATMLCCDPHADPSSSAARQFRRRSRVPHMFFLGLVSLAback to top mRNA from alignment at H-paniculata_contig42:7101..18313+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42.10768.1 ID=mRNA_H-paniculata_contig42.10768.1|Name=mRNA_H-paniculata_contig42.10768.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11213bp|location=Sequence derived from alignment at H-paniculata_contig42:7101..18313+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42:7101..18313+ >mRNA_H-paniculata_contig42.10768.1 ID=mRNA_H-paniculata_contig42.10768.1|Name=mRNA_H-paniculata_contig42.10768.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2286bp|location=Sequence derived from alignment at H-paniculata_contig42:7101..18313+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |