prot_H-paniculata_contig11681.1076.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11681.1076.1
Unique Nameprot_H-paniculata_contig11681.1076.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
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BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: D7FZS6_ECTSI (Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZS6_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.930e-68
Identity = 109/160 (68.12%), Postives = 123/160 (76.88%), Query Frame = 0 
Query:    6 YNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 165
            Y  IK  V IYL+ +GY+  KIPFVPIS WA DNM DKS N+PWYK PYLLEALDT KEP RPTDK LRL LQDVY++GGI  VPVGR ETG LKPGM VTFA   L+TEV+S+EM++E    AVPGD VGFNVK +S  DIRR YVA D ++DPP GAS
Sbjct:  167 YTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGCLKPGMVVTFAPCMLDTEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAS 326
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BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A7S3ZS59_9STRA (Elongation factor 1-alpha (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZS59_9STRA)

HSP 1 Score: 212 bits (539), Expect = 7.020e-65
Identity = 103/163 (63.19%), Postives = 120/163 (73.62%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 165
            +G Y  IKA V+ YL+ +GY+  KIPFVPIS W  DNM DKS N+PWYK PYLLEALD    P RP+DK LRL LQDVY++GGI  VPVGR ETGI+KPGM  TFA V + TEV+S+EM++E    AVPGD VGFNVK +S  DIRR  V  D +KDPP GAS
Sbjct:  169 EGRYKEIKAEVSTYLKKVGYKPMKIPFVPISGWMGDNMIDKSTNMPWYKGPYLLEALDNANPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVCTFAPVQITTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGNVCGDSKKDPPKGAS 331
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BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A7R9UA66_9STRA (Elongation factor 1-alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA66_9STRA)

HSP 1 Score: 207 bits (527), Expect = 4.950e-62
Identity = 100/163 (61.35%), Postives = 121/163 (74.23%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 165
            +  YN IK+ VT YL+ +GY+  KIPFVPIS W  DNM +KS N+PWYK P LLEALD  K P RP+DK LRL LQDVY++GGI  VPVGR ETG+LKPGM VTFA V ++TEV+S+EM++E    AVPGD VGFNVK +S  DI+R YVA D + DP  G +
Sbjct:  162 EDRYNEIKSEVTGYLKKVGYKPAKIPFVPISGWVGDNMIEKSSNMPWYKGPCLLEALDAVKPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVGVQTEVKSVEMHHESLPQAVPGDNVGFNVKNVSVKDIKRGYVASDSKNDPAQGCT 324
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A836CC12_9STRA (Elongation factor 1-alpha n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC12_9STRA)

HSP 1 Score: 207 bits (527), Expect = 5.460e-62
Identity = 100/163 (61.35%), Postives = 121/163 (74.23%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 165
            +  YN IK  VT YL+ +GY+  KIPFVPIS WA DNM ++S N+PWYK P+LLEALD+   P RPTDK LRL LQDVY++GGI  VPVGR ETG+LKPGM V FA   + TEV+S+EM++E  A A+PGD VGFNVK +S  DIRR  VA D + DPP GA+
Sbjct:  164 EARYNEIKEEVTNYLKKVGYKPVKIPFVPISGWAGDNMIERSENMPWYKGPFLLEALDSCMPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPTGVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPVGAA 326
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A2Z4KKD3_9STRA (Translation elongation factor 1-alpha (Fragment) n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A2Z4KKD3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.600e-61
Identity = 95/161 (59.01%), Postives = 116/161 (72.05%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 163
            Q  Y  IK+ VT YL+ +GY+  KIPFVPIS W  DNM D+S N+PWYK P+LLEALD    P RP+DK LRL LQDVY++GGI  VPVGR ETG++KPGM  TF  V L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR +VA D + DP  G
Sbjct:   62 QARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSANMPWYKGPFLLEALDNLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKG 222
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: Q697W6_9STRA (Translation elongation factor 1 alpha (Fragment) n=2 Tax=Peronosporaceae TaxID=4777 RepID=Q697W6_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.190e-61
Identity = 95/161 (59.01%), Postives = 116/161 (72.05%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 163
            Q  Y  IK+ VT YL+ +GY+  KIPFVPIS W  DNM D+S N+PWYK P+LLEALD    P RP+DK LRL LQDVY++GGI  VPVGR ETG++KPGM  TF  V L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR +VA D + DP  G
Sbjct:   87 QARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPFLLEALDNLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKG 247
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A288Z895_PHYRM (Elongation factor 1-alpha (Fragment) n=34 Tax=Phytophthora TaxID=4783 RepID=A0A288Z895_PHYRM)

HSP 1 Score: 202 bits (513), Expect = 4.610e-61
Identity = 97/161 (60.25%), Postives = 116/161 (72.05%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 163
            Q  Y  IK  VT YL+ +GY+  KIPFVPIS W  DNM +KS N+PWYK PYLLEALDT   P RP+DK LRL LQDVY++GGI  VPVGR ETG++KPGM  TF  V L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR +VA D + DP  G
Sbjct:  104 QARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPYLLEALDTLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKG 264
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A288Z7S5_9STRA (Elongation factor 1-alpha (Fragment) n=45 Tax=Phytophthora TaxID=4783 RepID=A0A288Z7S5_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.610e-61
Identity = 96/161 (59.63%), Postives = 115/161 (71.43%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 163
            Q  Y  IK+ VT YL+ +GY+  KIPFVPIS W  DNM D+S N+PWYK PYLLEALD    P RP DK LRL LQDVY++GGI  VPVGR ETG++KPGM  TF  V L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR +VA D + DP  G
Sbjct:  104 QARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSSNMPWYKGPYLLEALDNLNAPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKG 264
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A7S3K0G6_9STRA (Elongation factor 1-alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0G6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.720e-61
Identity = 98/163 (60.12%), Postives = 118/163 (72.39%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 165
            +  Y  IK  V+ YL+ +GY+  KIPFVPIS W  DNM DKS N+PWYK P+LLEALD    P RPTD+ LRL LQDVY++GGI  VPVGR ETG+LKPGM VTFA   L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR YVA D + DP  GA+
Sbjct:  164 EARYKEIKQEVSSYLKKVGYKPMKIPFVPISGWMGDNMIDKSANMPWYKGPFLLEALDNVNPPKRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTQLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGAA 326
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A288Z7V8_9STRA (Elongation factor 1-alpha (Fragment) n=98 Tax=Oomycota TaxID=4762 RepID=A0A288Z7V8_9STRA)

HSP 1 Score: 201 bits (512), Expect = 6.520e-61
Identity = 95/158 (60.13%), Postives = 116/158 (73.42%), Query Frame = 0 
Query:    3 QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDP 160
            Q  Y  IK+ VT YL+ +GY+  KIPFVPIS W  DNM D+S N+PWYK P+LLEALD    P RP+DK LRL LQDVY++GGI  VPVGR ETG++KPGM  TF  V L TEV+S+EM++E  A AVPGD VGFNVK +S  ++RR +VA D + DP
Sbjct:  104 QARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSANMPWYKGPFLLEALDNLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLAEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDP 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZS6_ECTSI1.930e-6868.13Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID... [more]
A0A7S3ZS59_9STRA7.020e-6563.19Elongation factor 1-alpha (Fragment) n=1 Tax=Pelag... [more]
A0A7R9UA66_9STRA4.950e-6261.35Elongation factor 1-alpha n=1 Tax=Pinguiococcus py... [more]
A0A836CC12_9STRA5.460e-6261.35Elongation factor 1-alpha n=2 Tax=Tribonema minus ... [more]
A0A2Z4KKD3_9STRA1.600e-6159.01Translation elongation factor 1-alpha (Fragment) n... [more]
Q697W6_9STRA4.190e-6159.01Translation elongation factor 1 alpha (Fragment) n... [more]
A0A288Z895_PHYRM4.610e-6160.25Elongation factor 1-alpha (Fragment) n=34 Tax=Phyt... [more]
A0A288Z7S5_9STRA4.610e-6159.63Elongation factor 1-alpha (Fragment) n=45 Tax=Phyt... [more]
A0A7S3K0G6_9STRA4.720e-6160.12Elongation factor 1-alpha n=1 Tax=Aureoumbra lagun... [more]
A0A288Z7V8_9STRA6.520e-6160.13Elongation factor 1-alpha (Fragment) n=98 Tax=Oomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 67..159
e-value: 4.0E-27
score: 96.1
NoneNo IPR availableGENE3D3.40.50.300coord: 2..65
e-value: 2.9E-9
score: 38.6
NoneNo IPR availablePANTHERPTHR23115TRANSLATION FACTORcoord: 4..166
NoneNo IPR availablePANTHERPTHR23115:SF248coord: 4..166
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 65..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11681contigH-paniculata_contig11681:4382..4951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11681.1076.1mRNA_H-paniculata_contig11681.1076.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11681 2908..5001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11681.1076.1 ID=prot_H-paniculata_contig11681.1076.1|Name=mRNA_H-paniculata_contig11681.1076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MYQGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWY
KNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILK
PGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRR
YVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf