mRNA_H-paniculata_contig11681.1076.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11681.1076.1
Unique NamemRNA_H-paniculata_contig11681.1076.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: D7FZS6_ECTSI (Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZS6_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 3.420e-142
Identity = 218/320 (68.12%), Postives = 245/320 (76.56%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 1969
            HIN VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGK+SFKYAWVLD LKAE E G+  +I L  FE+P   +T+I A GHRDFIKNMI GTS+ADVAVL+VASGVGEFE GI K G  R+  LLAFTLGVKQ+IVCINK+DD SVMY +  Y  IK  V IYL+ +GY+  KIPFVPIS WA DNM DKS N+PWYK PYLLEALDT KEP RPTDK LRL LQDVY++GGI  VPVGR ETG LKPGM VTFA   L+TEV+S+EM++E    AVPGD VGFNVK +S  DIRR YVA D ++DPP GAS
Sbjct:    7 HINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGCLKPGMVVTFAPCMLDTEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAS 326
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A836CC12_9STRA (Elongation factor 1-alpha n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC12_9STRA)

HSP 1 Score: 416 bits (1068), Expect = 7.400e-136
Identity = 209/320 (65.31%), Postives = 242/320 (75.62%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 1969
            HIN VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGK+SFKYAWVLD LKAE E G+  +I L  FETP   YT+I A GHRDFIKNMI GTS+ADVA+L+VASGVGEFE GI K G  R+  LLA+TLGVKQ+IVCINK+DD SVMY +  YN IK  VT YL+ +GY+  KIPFVPIS WA DNM ++S N+PWYK P+LLEALD+   P RPTDK LRL LQDVY++GGI  VPVGR ETG+LKPGM V FA   + TEV+S+EM++E  A A+PGD VGFNVK +S  DIRR  VA D + DPP GA+
Sbjct:    7 HINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKSSFKYAWVLDNLKAERERGITIDIALWKFETPKFNYTVIDAPGHRDFIKNMITGTSQADVAMLVVASGVGEFEAGISKDGQTREHALLAYTLGVKQMIVCINKMDDSSVMYGEARYNEIKEEVTNYLKKVGYKPVKIPFVPISGWAGDNMIERSENMPWYKGPFLLEALDSCMPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPTGVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPVGAA 326
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A7S3ZS59_9STRA (Elongation factor 1-alpha (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZS59_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 1.800e-132
Identity = 204/320 (63.75%), Postives = 235/320 (73.44%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 1969
            HIN VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGKASFKYAWVLD LKAE E G+  +I L  FE+P   +T+I A GHRDFIKNMI GTS+AD+A+L++ S VG FE GI K G  R+  LLAFTLGVKQ+IV  NK+DD SV Y +G Y  IKA V+ YL+ +GY+  KIPFVPIS W  DNM DKS N+PWYK PYLLEALD    P RP+DK LRL LQDVY++GGI  VPVGR ETGI+KPGM  TFA V + TEV+S+EM++E    AVPGD VGFNVK +S  DIRR  V  D +KDPP GAS
Sbjct:   12 HINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKASFKYAWVLDNLKAERERGITIDIALWKFESPKFYFTVIDAPGHRDFIKNMITGTSQADIAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVACNKMDDVSVKYGEGRYKEIKAEVSTYLKKVGYKPMKIPFVPISGWMGDNMIDKSTNMPWYKGPYLLEALDNANPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVCTFAPVQITTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGNVCGDSKKDPPKGAS 331
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: W7T3J7_9STRA (Elongation factor 1-alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3J7_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 1.980e-130
Identity = 201/320 (62.81%), Postives = 237/320 (74.06%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 1969
            H+N VV+G VDAG ST  GHL YKC  I K  I KFEKE  ELGK+SFKYAWVLD LKAE E G+  +I L  FE+P   +TII A GHRDFIKNMI GTS+ADVA+LIVASG GEFE GI K G  R+  LLAFTLGVKQ+IVC+NK+DD SV Y +  +N IK  V+ YL+ +GY+  K+PF+PIS W  DNM D+S N+ WYK P LLEALD    P RPTDK LRL LQDVY++GGI  VPVGR ETG+LKPGM VT A   + TEV+S+EM++E  A A+PGD VGFNVK +S  +IRR YVA D +KDPP GA+
Sbjct:    7 HVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAA 326
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: H3G8M4_PHYRM (Elongation factor 1-alpha n=42 Tax=Peronosporaceae TaxID=4777 RepID=H3G8M4_PHYRM)

HSP 1 Score: 401 bits (1031), Expect = 2.700e-130
Identity = 202/318 (63.52%), Postives = 235/318 (73.90%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 1963
            HI+ VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGK SFKYAWVLD LKAE E G+  +I L  FE+P   +T+I A GHRDFIKNMI GTS+AD A+L+VASGVGEFE GI K+G  R+  LLAFTLGVKQ+IV INK+DD SVMY Q  Y  IK  VT YL+ +GY+  KIPFVPIS W  DNM +KS N+PWYK PYLLEALDT   P RP+DK LRL LQDVY++GGI  VPVGR ETG++KPGM  TF  V L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR +VA D + DP  G
Sbjct:    7 HISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPYLLEALDTLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKG 324
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A485KD22_9STRA (Elongation factor 1-alpha n=33 Tax=Eukaryota TaxID=2759 RepID=A0A485KD22_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 1.730e-129
Identity = 201/318 (63.21%), Postives = 233/318 (73.27%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 1963
            HI+ VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGK+SFKYAWVLD LKAE E G+  +I L  FE+P   +T+I A GHRDFIKNMI G SKAD A+L+VASGVGEFE GI K G  R+  LLAFTLGV+Q+IV INK+DD SVMY +  YN IK  VT YL+ +GY+  KIPFVPIS W  DNM +KS N+PWYK PYLLEALD    P RPTDK LRL LQDVY++GGI  VPVGR ETG+LKPGM V F    L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR +VA D + DP  G
Sbjct:    7 HISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGPSKADAAILVVASGVGEFEAGISKDGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGESRYNEIKEEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSANMPWYKGPYLLEALDGLNPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFGPSGLSTEVKSVEMHHESMPEAVPGDNVGFNVKNISVKELRRGFVASDSKNDPAKG 324
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A7R9UA66_9STRA (Elongation factor 1-alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA66_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 2.560e-129
Identity = 202/319 (63.32%), Postives = 235/319 (73.67%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMYQGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 1969
            H+N VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGK SFKYAWVLD LKAE E G+  +I L  FETP   YT+I A GHRDFIKNMI GTS+ADVA+LIVASG GEFE GI K G  R+  LLA+TLGVKQ+IV +NKID  +   +  YN IK+ VT YL+ +GY+  KIPFVPIS W  DNM +KS N+PWYK P LLEALD  K P RP+DK LRL LQDVY++GGI  VPVGR ETG+LKPGM VTFA V ++TEV+S+EM++E    AVPGD VGFNVK +S  DI+R YVA D + DP  G +
Sbjct:    7 HVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDNLKAERERGITIDIALWKFETPKYHYTVIDAPGHRDFIKNMITGTSQADVALLIVASGAGEFEAGISKDGQTREHALLAYTLGVKQMIVGVNKIDSANYA-EDRYNEIKSEVTGYLKKVGYKPAKIPFVPISGWVGDNMIEKSSNMPWYKGPCLLEALDAVKPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVGVQTEVKSVEMHHESLPQAVPGDNVGFNVKNVSVKDIKRGYVASDSKNDPAQGCT 324
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: A0A7S3K0G6_9STRA (Elongation factor 1-alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0G6_9STRA)

HSP 1 Score: 397 bits (1020), Expect = 1.330e-128
Identity = 199/320 (62.19%), Postives = 234/320 (73.12%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 1969
            H+N VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGKASFKYAWVLD LKAE E G+  +I L  FE+P   +T+I A GHRDFIKNMI GTS+ADVA+L++ S VG FE GI K G  R+  LLAFTLGVKQ+IV +NK+DD SV Y +  Y  IK  V+ YL+ +GY+  KIPFVPIS W  DNM DKS N+PWYK P+LLEALD    P RPTD+ LRL LQDVY++GGI  VPVGR ETG+LKPGM VTFA   L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR YVA D + DP  GA+
Sbjct:    7 HVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKASFKYAWVLDNLKAERERGITIDIALWKFESPKYYFTVIDAPGHRDFIKNMITGTSQADVAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVAMNKMDDVSVKYGEARYKEIKQEVSSYLKKVGYKPMKIPFVPISGWMGDNMIDKSANMPWYKGPFLLEALDNVNPPKRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTQLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGAA 326
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: F0Y4T9_AURAN (Elongation factor 1-alpha n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4T9_AURAN)

HSP 1 Score: 396 bits (1017), Expect = 3.730e-128
Identity = 200/319 (62.70%), Postives = 233/319 (73.04%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGA 1966
            HIN VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGKASFKYAWVLD LKAE E G+  +I L  FE+P   +T+I A GHRDFIKNMI GTS+ADVA+L++ S VG FE GI K G  R+  LLAFTLGVKQ+IV  NK+DD SV Y +  Y  IK  V+ YL+ +GY+  KIPF+PIS WA DNM DKS N+ WYK PYLLEALD    P RPT+K LRL LQDVY++GGI  VPVGR ETG+LKPGM VTFA   L TEV+S+EM++E    AVPGD VGFNVK +S  D+RR +V  D ++DPP GA
Sbjct:    7 HINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKASFKYAWVLDNLKAERERGITIDIALWKFESPKFYFTVIDAPGHRDFIKNMITGTSQADVAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVACNKMDDVSVKYGEARYKEIKQEVSGYLKKVGYKPMKIPFIPISGWAGDNMIDKSTNMGWYKGPYLLEALDNCNPPKRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAQLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDLRRGFVCGDSKQDPPKGA 325
[Close]
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Match: W2Q9P2_PHYPN (Elongation factor 1-alpha n=70 Tax=Stramenopiles TaxID=33634 RepID=W2Q9P2_PHYPN)

HSP 1 Score: 402 bits (1033), Expect = 7.100e-128
Identity = 202/318 (63.52%), Postives = 233/318 (73.27%), Query Frame = 2 
Query: 1013 HINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 1963
            HI+ VV+G VDAG ST  GHL YKC  I K TI KFEKE  ELGK SFKYAWVLD LKAE E G+  +I L  FE+P   +T+I A GHRDFIKNMI GTS+AD A+L+VASGVGEFE GI K+G  R+  LLAFTLGVKQ+IV INK+DD SVMY Q  Y  IK  VT YL+ +GY+  KIPFVPIS W  DNM D+S N+PWYK PYLLEALD    P RP DK LRL LQDVY++GGI  VPVGR ETG++KPGM  TF  V L TEV+S+EM++E    AVPGD VGFNVK +S  ++RR YVA D + DP  G
Sbjct:  208 HISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKG 525
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11681.1076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZS6_ECTSI3.420e-14268.13Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID... [more]
A0A836CC12_9STRA7.400e-13665.31Elongation factor 1-alpha n=2 Tax=Tribonema minus ... [more]
A0A7S3ZS59_9STRA1.800e-13263.75Elongation factor 1-alpha (Fragment) n=1 Tax=Pelag... [more]
W7T3J7_9STRA1.980e-13062.81Elongation factor 1-alpha n=2 Tax=Monodopsidaceae ... [more]
H3G8M4_PHYRM2.700e-13063.52Elongation factor 1-alpha n=42 Tax=Peronosporaceae... [more]
A0A485KD22_9STRA1.730e-12963.21Elongation factor 1-alpha n=33 Tax=Eukaryota TaxID... [more]
A0A7R9UA66_9STRA2.560e-12963.32Elongation factor 1-alpha n=1 Tax=Pinguiococcus py... [more]
A0A7S3K0G6_9STRA1.330e-12862.19Elongation factor 1-alpha n=1 Tax=Aureoumbra lagun... [more]
F0Y4T9_AURAN3.730e-12862.70Elongation factor 1-alpha n=3 Tax=Pelagomonadales ... [more]
W2Q9P2_PHYPN7.100e-12863.52Elongation factor 1-alpha n=70 Tax=Stramenopiles T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11681contigH-paniculata_contig11681:2908..5001 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.6
Seed ortholog evalue1.5e-55
Seed eggNOG ortholog2880.D7FZS6
Preferred nameTEF1
KEGG koko:K03231
KEGG Pathwayko03013,ko05134,map03013,map05134
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000302,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001882,GO:0001883,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003779,GO:0003785,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005516,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005853,GO:0005938,GO:0006403,GO:0006405,GO:0006409,GO:0006412,GO:0006414,GO:0006469,GO:0006518,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007154,GO:0007165,GO:0008092,GO:0008104,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009268,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010446,GO:0010467,GO:0010563,GO:0010605,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017016,GO:0017048,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019220,GO:0019222,GO:0019538,GO:0019722,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022607,GO:0023052,GO:0030027,GO:0030029,GO:0030036,GO:0030175,GO:0031090,GO:0031143,GO:0031252,GO:0031267,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031503,GO:0031667,GO:0031668,GO:0031669,GO:0032268,GO:0032269,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033554,GO:0033673,GO:0034198,GO:0034613,GO:0034641,GO:0034645,GO:0035556,GO:0035639,GO:0036094,GO:0042221,GO:0042325,GO:0042326,GO:0042594,GO:0042886,GO:0042995,GO:0043021,GO:0043022,GO:0043043,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045859,GO:0045936,GO:0046907,GO:0048519,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051015,GO:0051017,GO:0051020,GO:0051031,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061572,GO:0065007,GO:0065009,GO:0070727,GO:0071166,GO:0071426,GO:0071431,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0097064,GO:0097159,GO:0097367,GO:0097435,GO:0098588,GO:0098805,GO:0098852,GO:0098858,GO:0099568,GO:0120025,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904,GO:1990928
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG5256@1,KOG0052@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012,ko03016,ko03019,ko04131,ko04147
Exons1
Model size2094
Cds size570
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11681.1076.1prot_H-paniculata_contig11681.1076.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11681 4382..4951 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928876.4339705-UTR-H-paniculata_contig11681:2907..43811622928876.4339705-UTR-H-paniculata_contig11681:2907..4381Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11681 2908..4381 +
1691480653.4241276-UTR-H-paniculata_contig11681:2907..43811691480653.4241276-UTR-H-paniculata_contig11681:2907..4381Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11681 2908..4381 +
1622928876.4802127-UTR-H-paniculata_contig11681:4951..50011622928876.4802127-UTR-H-paniculata_contig11681:4951..5001Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11681 4952..5001 +
1691480653.4439833-UTR-H-paniculata_contig11681:4951..50011691480653.4439833-UTR-H-paniculata_contig11681:4951..5001Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11681 4952..5001 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928876.4662952-CDS-H-paniculata_contig11681:4381..49511622928876.4662952-CDS-H-paniculata_contig11681:4381..4951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11681 4382..4951 +
1691480653.4355464-CDS-H-paniculata_contig11681:4381..49511691480653.4355464-CDS-H-paniculata_contig11681:4381..4951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11681 4382..4951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11681.1076.1

>prot_H-paniculata_contig11681.1076.1 ID=prot_H-paniculata_contig11681.1076.1|Name=mRNA_H-paniculata_contig11681.1076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MYQGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWY
KNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILK
PGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRR
YVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*
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mRNA from alignment at H-paniculata_contig11681:2908..5001+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11681.1076.1 ID=mRNA_H-paniculata_contig11681.1076.1|Name=mRNA_H-paniculata_contig11681.1076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2094bp|location=Sequence derived from alignment at H-paniculata_contig11681:2908..5001+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCTTAACTGCAAAAGGTGTAGAAGCGGACAAAAAATGTTCTTGACTAGG
GAGGGTTATGTATTCGATAGGCCAGGAAAAACTATTCTGATCCACTTTTG
GAAGATGCGGAGGCATCAATTGGCCATTGGCAGTCGCTCCTGGGGCGGGC
GATCCTCTCCCTCTCGTGGGACCCCCGACCAAGAATCTAACGGCTGAGCA
AAGCATGCATAATATGAGAACACCACGAGCACCAGTAATGTAACGGCTAC
GCAAGGCATGTTGTTATGAGGATAGAGGCTCCTTGGAGTACCGAGCAAAT
TTTGATAGCCTTTCACCTATGGTTCAGCTGACTCCTTGACAACGCACACA
AATGTACACATGAATGAGAAACCCCCGCATGCCAGTAAGAATCTAACGGC
TAAGCAAGCTTGCAAAAATGAGAATCCCCCGAACATACGCACACACTTTC
CTCCCATTCTCTATTCCCTCCGTTACCCGGTCCATTTTGAATCTATCTTC
TCAGGACCAATGGCACCCCAAAGAGGTCTTGTGGAGGTCCGTGCGGCGAG
GGGGGAACAACAAGAGTCGAAACCAAGCCACTTCGCGCTGTTGAGAGTAG
TGTTGCTAGAAACGCTTGCACGTGATGACTTCATTTTCCTTTCACTAGAC
ATACGAATCCCAAACACATCGTCCGTCCGTTGTTCACGACCACACTCTCG
TCAGGCTGTTATTTACCTCAGTCAATTTTCTCGCAAAATTTCCATGAACC
CTCGCTCTATTCCAAGGGTGATCGATGCATGTGCTCTGTGGTGCTGCTGT
GAGCGCACACCTCGACGCATCCTCACCTGGTCGTCCGATACAGATATCCG
ACGTCACACTACGTGCTGAATTCCTGGACAAGCCCTTGTGAGGTTCTGCA
GCGTGTACACAGAGTGTAAGCACAGTACAATGCGTAGTGTCGATGAAGAA
AGTGACTCGCGTAGGCTGACTTTTGGGGGTTTCCGTTGTGTTGCGTGTGA
TTTCGCTAGGCTCACATCAACGCTGTCGTAGTCGGAGACGTGGATGCCGG
TATGTCGACGATAGCCGGTCACCTCACCTACAAGTGTAGCTTCATCACCA
AGTTCACGATAGGCAAGTTCGAGAAGGAGACCACCGAGCTCGGCAAGGCC
TCTTTCAAGTACGCGTGGGTGCTGGACACTCTCAAGGCCGAGCACGAATA
TGGCGTCATGACCAACATCACCTTACGAGCGTTCGAGACGCCCACGTGTA
CATACACAATCATACACGCCCTTGGGCATCGCGACTTCATCAAGAACATG
ATCATGGGAACCTCGAAGGCCGATGTGGCCGTTTTGATTGTGGCTTCTGG
CGTGGGAGAGTTCGAGGTCGGCATCCCTAAGAAGGGGTAGGCGCGCAAGC
GCACCCTGCTAGCGTTCACCCTAGGCGTAAAGCAGCTGATCGTGTGCATC
AACAAGATCGATGACCCGTCGGTGATGTACCAAGGCCACTACAATGGAAT
CAAGGCGAACGTGACAATCTACCTGAGAGATATTGGGTACAGATCGACTA
AAATTCCGTTTGTGCCTATCTCGAGATGGGCTAGAGACAATATGTTTGAC
AAATCCATCAACATACCGTGGTATAAGAACCCGTACCTACTGGAGGCCCT
GGACACCACGAAGGAGCCCGCCCGGCCGACAGACAAGCTCCTCCGCCTTC
TTCTCCAGGATGTGTACAGGGTCGGCGGTATCGATATGGTGCCCGTCGGG
CGTACGGAGACTGGGATTCTGAAGCCTGGTATGGCAGTTACGTTCGCGTC
GGTGACGTTGGAGACGGAGGTGCAGTCGATGGAGATGAACAACGAGGTAC
CGGCCGCGGCCGTGCCCGGGGATATTGTTGGTTTCAACGTCAAGAAATTG
TCGACGACGGACATCCGCCGTAGATATGTGGCCGATGACCCCCAAAAGGA
CCCGCCTACGGGCGCTTCTATGGTCAAGCTCGCGTACAGAATGTTTTTGC
ATTTTGGTTTTGGTTTGCAGGCACAACGTGTCAGTTCATTGTAAACGGAG
TCTCATTATCCAGTTGATGTATCGGCGATCTTCAAAGCGAAAGA
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Coding sequence (CDS) from alignment at H-paniculata_contig11681:2908..5001+

>mRNA_H-paniculata_contig11681.1076.1 ID=mRNA_H-paniculata_contig11681.1076.1|Name=mRNA_H-paniculata_contig11681.1076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig11681:2908..5001+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACCAAGGCCACTACAATGGAATCAAGGCGAACGTGACAATCTACCT
GAGAGATATTGGGTACAGATCGACTAAAATTCCGTTTGTGCCTATCTCGA
GATGGGCTAGAGACAATATGTTTGACAAATCCATCAACATACCGTGGTAT
AAGAACCCGTACCTACTGGAGGCCCTGGACACCACGAAGGAGCCCGCCCG
GCCGACAGACAAGCTCCTCCGCCTTCTTCTCCAGGATGTGTACAGGGTCG
GCGGTATCGATATGGTGCCCGTCGGGCGTACGGAGACTGGGATTCTGAAG
CCTGGTATGGCAGTTACGTTCGCGTCGGTGACGTTGGAGACGGAGGTGCA
GTCGATGGAGATGAACAACGAGGTACCGGCCGCGGCCGTGCCCGGGGATA
TTGTTGGTTTCAACGTCAAGAAATTGTCGACGACGGACATCCGCCGTAGA
TATGTGGCCGATGACCCCCAAAAGGACCCGCCTACGGGCGCTTCTATGGT
CAAGCTCGCGTACAGAATGTTTTTGCATTTTGGTTTTGGTTTGCAGGCAC
AACGTGTCAGTTCATTGTAAATGTACCAAGGCCACTACAATGGAATCAAG
GCGAACGTGACAATCTACCTGAGAGATATTGGGTACAGATCGACTAAAAT
TCCGTTTGTGCCTATCTCGAGATGGGCTAGAGACAATATGTTTGACAAAT
CCATCAACATACCGTGGTATAAGAACCCGTACCTACTGGAGGCCCTGGAC
ACCACGAAGGAGCCCGCCCGGCCGACAGACAAGCTCCTCCGCCTTCTTCT
CCAGGATGTGTACAGGGTCGGCGGTATCGATATGGTGCCCGTCGGGCGTA
CGGAGACTGGGATTCTGAAGCCTGGTATGGCAGTTACGTTCGCGTCGGTG
ACGTTGGAGACGGAGGTGCAGTCGATGGAGATGAACAACGAGGTACCGGC
CGCGGCCGTGCCCGGGGATATTGTTGGTTTCAACGTCAAGAAATTGTCGA
CGACGGACATCCGCCGTAGATATGTGGCCGATGACCCCCAAAAGGACCCG
CCTACGGGCGCTTCTATGGTCAAGCTCGCGTACAGAATGTTTTTGCATTT
TGGTTTTGGTTTGCAGGCACAACGTGTCAGTTCATTGTAA
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