prot_H-paniculata_contig4187.10749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4187.10749.1
Unique Name	prot_H-paniculata_contig4187.10749.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	660

Homology

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: A0A6H5KRS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS0_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 9.980e-150
Identity = 343/653 (52.53%), Postives = 379/653 (58.04%), Query Frame = 0

Query:   68 EGLATPPLPEEPLQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAVTPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQPTAAAAAAAPYGMGGPPGSAGGVMPG-MPYGMP-GMGAPMMNGQPSXXXXXXXXRG-MFGNGG---------------------------------------------NMMMQGGPGGMRFGGMQHSGMVQQQGASXXXXXXXXXXXXXXXXXXGMGGMHGHQGHRMGQQHLGMGMNPKQLHQQQQXXXXXXXXXXXXXXXXXXXXXXXXXGEKKGSLRDAQQGVVAVGNGGXXXXXXXXXXXXXXXXAGVEGRGSDRPRKGDRTANTLQGRGEGGRGGAKTRN---STGRDMLSAANFPPLPGADS----------LAAATGAGAAGGVARSMPPGAPVVEDQVVAGSPRSEGGIEGSAVGAVP-PAVAAAGYQGTFIQYQQDEILKIVSSLSQVDVAVVPGVEDIGQHSLVFEREANVGLLMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGSYMYGEGHE 658
            EG   P +PE  L GKELL A+KKQVEFYFS+QNLQ+DGFLVS+MNA MCVPVAVIAQFHKIQQLTSD  LIVESVKDSTVC VTPDGIKPSIKQERNTIILREIPS+TP+EKIR +FTG+GVAPI+SIRSDVGDTWFVTM+SEDDA +TILALR K FEGK+IKARLKSEN+LRSFFPVPTAAEVQPTAAAAAAAPYG+G  P  AG  MPG +PYGM  GMGAPMMNGQP+        RG M+G GG                                               MM G  GGM+            Q                               H MGQQ +GM  N    H QQ                              G    A  G  A  +G   XXXXXXXXXXXXXX           +KGDR  +  QG                S GRDMLSAANFPPLPG D                              GA   +D V  G   ++     + V   P PA    GY G FIQYQ D+ILKIVS+LSQ DVAVVPGV DI +H+L FE +AN+GL+MRQRSVSIDECREQLRKGRPVHREGVIAGAVDYG+YMYGEGH+
Sbjct:   57 EGTTPPVVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSDTPQEKIRKIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAAAAAAPYGLGAGPAGAG--MPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQ-------------------------------HGMGQQMMGMNAN----HPQQ-----------------------------GGGYGGANGGAGAPYSGQHQXXXXXXXXXXXXXXX---------XKKGDRGNSAQQGXXXXXXXXXXXXXXXXSGGRDMLSAANFPPLPGTDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAASTDDMVTTGE--ADASSPAADVPEAPAPAPGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHALAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHD 632

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: D8LL21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL21_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.250e-127
Identity = 311/621 (50.08%), Postives = 339/621 (54.59%), Query Frame = 0

Query:   67 AEGLATPPLPEEPLQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAVTPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQPTAAAAAAAPYGMGGPPGS--AGGVMPG-MPYGMP-GMGAPMMNGQPSXXXXXXXXRG-MFGNGG--------NMMMQGGPGGMRFGGMQHSGMVQQQGASXXXXXXXXXXXXXXXXXXGMGGMHGHQG----------------HRMGQQHLGMGMNPKQLHQQQQXXXXXXXXXXXXXXXXXXXXXXXXXGEKKGSLRDAQQGVVAVGNGGXXXXXXXXXXXXXXXXAGVEGRGSDRPRKGDRTANTLQGRGEGGRGGAKTRNSTGRDMLSAANFPPLPGADSLAAATGAGAAGGVARSMPPGAPVVEDQVVAGSPRSEGGIEGSAVGAVPPAVAAAGYQGTFIQYQQDEILKIVSSLSQVDVAVVPGVEDIGQHSLVFEREANVGLLMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGSYMYGEGHE 658
            AEG + P +PE  L GKELL A+KKQVEFYFS+QNLQ+DGFLVS+MNA MCVPVAVIAQFHKIQQLTSD  LIVESVKDSTVC VT DGIKPSIKQERNTIILREIPSETP+EKIR +FTG+GVAPI+SIRSDVGDTWFVTM+SEDDA +TILALR K FEGK+IKARLKSEN+LRSFFPVPTAAEVQPTAA                 AG  MPG +PYGM  GMGAPMMNGQP+        RG M+G GG                 GMRF               XXXXXXXXXXXXXXXXX G G M G +G                H MGQQ +GM  N    H QQ                                                                                                           AA   P P            AAGG+                                         GY G FIQYQ D+ILKIVS+LSQ DVAVVPGV DI +HSL FE +AN+GL+MRQRSVSIDECREQLRKGRPVHREGVIAGAVDYG+YMYGEGH+
Sbjct:   51 AEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTSDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXAGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXGMRF------------XXXXXXXXXXXXXXXXXXXXRGGGMMAGARGXMXXXXXXXXXXXXQQHGMGQQMMGMNAN----HPQQ-----------------------------------------------------------------------------------------------------------AAAPAPAP------------AAGGL-----------------------------------------GYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHD 495

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: A0A7S4DKN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKN7_HETAK)

HSP 1 Score: 228 bits (580), Expect = 1.360e-66
Identity = 116/178 (65.17%), Postives = 144/178 (80.90%), Query Frame = 0

Query:   78 EPLQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAVTPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQP 255
            +PL+G+ L EA+KKQ+EFYFSRQNLQTDGFLVS+MNA+M VP+ VIA+F KI+ LT +  +I  +++ S VC VT D IKP+ K ERNTIILREIPS TPEEK+R +FTGEG+API +IRSDVGDTWFVT+ SE  A +  LALR + FEG+ +KARLKSEN+LR+F+PVP AA   P
Sbjct:   29 KPLEGEALREAVKKQIEFYFSRQNLQTDGFLVSKMNANMEVPITVIAEFAKIRALTREPDVIRAALEGSKVCIVTEDAIKPNFKTERNTIILREIPSNTPEEKVREIFTGEGMAPITNIRSDVGDTWFVTLGSEAAAVAACLALRERAFEGRPVKARLKSENLLRAFYPVPQAAADAP 206

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: A0A836CHL1_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL1_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.120e-64
Identity = 112/175 (64.00%), Postives = 142/175 (81.14%), Query Frame = 0

Query:   80 LQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAVTPDGIKPSIKQERNTIILREIPSETPEEK-------IRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPV 247
            L+GKEL++A+++QVEFYFS+ NLQ+DGFLVS+M+A  CVP++VIAQF K++ LT+D G I  +V +S+VC VTP GI+P++K ER+TIILREIPS+TP  K       +R LF GEG+APIR +RSDVG TWFVT  SE DA +TILALRS+ FEGK +KARLK EN+LRSFFPV
Sbjct:   48 LEGKELVDALRQQVEFYFSKANLQSDGFLVSRMDASGCVPISVIAQFAKVRALTTDEGAIAAAVANSSVCTVTPQGIRPNLKAERHTIILREIPSDTPPAKASCCCTCVRELFAGEGMAPIRGVRSDVGATWFVTCASEADAMATILALRSRTFEGKPVKARLKGENLLRSFFPV 222

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: A0A0W8DNS3_PHYNI (Ammonium Transporter (Amt) Family n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DNS3_PHYNI)

HSP 1 Score: 202 bits (514), Expect = 1.660e-55
Identity = 113/188 (60.11%), Postives = 138/188 (73.40%), Query Frame = 0

Query:   81 QGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAV--TPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQPTAAAAAAAPYG 266
            +G EL EAIK+QVEFYFSR NL  D +LVSQMN+ M VPV VI  F KI+QLT D  L+V++V+DSTVC++  + D IKP+IK ER TIILREIPS T  E++  +F  EG   + S+RSDVGDTWFVTM+SE +A ST+LALRSK F G  IKARLKSEN+L+SF+P   A  V    A +  APYG
Sbjct:   10 EGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAIF--EGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVLKSFYPTQPAENV---IAPSVGAPYG 192

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: A0A2P4XI52_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XI52_9STRA)

HSP 1 Score: 205 bits (522), Expect = 5.340e-55
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 0

Query:   80 LQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAV--TPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQPTAAAAAAAPYG 266
            L+G EL +AIK+QVEFYFSR NL  D +LVSQMN+ M VPV VI  F KI+QLT +  L+VE+V+DST+C++  + D IKP+IK ER TIILREIPS T  E++  +F  EG   + S+RSDVGDTWFVTM+SE +A ST+LALRSK F G +IKARLKSEN+L+SF+P   A  V    A +A APYG
Sbjct:    9 LEGAELKQAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDNTALLVEAVQDSTICSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVEAIF--EGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENV---IAPSAGAPYG 192

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: G4YGZ8_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YGZ8_PHYSP)

HSP 1 Score: 203 bits (516), Expect = 1.660e-53
Identity = 113/190 (59.47%), Postives = 139/190 (73.16%), Query Frame = 0

Query:   79 PLQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAVTP--DGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQPTAAAAAAAPYG 266
            P +G EL EAIK+QVEFYFSR NL  D +LVSQMN+ M VPV VI  F KI+QLT D  L+VE+V+DST+C++    D IKP+IK ER TIILREIPS T  E++  +F G G   + S+RSDVGDTWFVTM++E +A ST+LALRSK F G +IKARLKSEN+L+SF+P   A  V    A +  APYG
Sbjct:   24 PTEGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDAALLVEAVQDSTICSLNSAKDAIKPNIKSERTTIILREIPSSTKPEEVEAIFDGCG--KVASVRSDVGDTWFVTMNTEAEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPSQPAENV---IAPSVGAPYG 208

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: H3GMU1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMU1_PHYRM)

HSP 1 Score: 201 bits (512), Expect = 5.100e-53
Identity = 111/188 (59.04%), Postives = 138/188 (73.40%), Query Frame = 0

Query:   81 QGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAV--TPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQPTAAAAAAAPYG 266
            +G EL EAIK QVEFYFSR NL  D +LVSQMN+ M VPV +I  F KI+QLT +  L+VE+++DSTVC++  + D IKP+IK ER TIILREIPS T  E++  +F  EG   + S+RSDVGDTWFVTM++E +A ST+LALRSK F G +IKARLKSEN+L+SF+P   A  V    A   AAPYG
Sbjct:   10 EGAELKEAIKSQVEFYFSRANLANDAYLVSQMNSQMYVPVEIIINFSKIKQLTDNTALLVEAMQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTQPEEVEAIF--EGCGKVASVRSDVGDTWFVTMNTESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENV---IAPGVAAPYG 192

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: D0NY71_PHYIT (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=D0NY71_PHYIT)

HSP 1 Score: 200 bits (508), Expect = 1.490e-52
Identity = 112/189 (59.26%), Postives = 138/189 (73.02%), Query Frame = 0

Query:   80 LQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAV--TPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTAAEVQPTAAAAAAAPYG 266
            L+G EL EAIK+QVEFYFSR NL  D +LVSQMN+ M VPV VI  F KI QLT +  L+VE+V++STVC++  + D IKP+IK ER TIILREI S T  E++  +F  EG   + S+RSDVGDTWFVTM+SE +A ST+LALRSK F G +IKARLKSEN+L+SF+P   A  V    A +  APYG
Sbjct:    9 LEGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKITQLTDNTALLVEAVQESTVCSLNSSKDAIKPNIKSERTTIILREISSSTKPEEVEAIF--EGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENV---IAPSVGAPYG 192

[Close]

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Match: A0A024TXK9_9STRA (HTH La-type RNA-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXK9_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.500e-52
Identity = 106/172 (61.63%), Postives = 130/172 (75.58%), Query Frame = 0

Query:   80 LQGKELLEAIKKQVEFYFSRQNLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCAVTPDG--IKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDVGDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPT 249
            L G  L EA+K QVEFYFS+ NL  D FLVSQMN+ M VPV VI  F KI+ LT+D+ L+V+S+KDSTVC+++P+G  IKP+IK ERNTIILREIPS T  + +  +F  EG   + S+RSDVGDTWFVTM +E+DA +T+LALRSK F    IKARLKSEN+LRSF P  T
Sbjct:    7 LSGDALKEALKSQVEFYFSKANLVNDTFLVSQMNSQMYVPVDVIVGFSKIKALTTDVALVVDSIKDSTVCSLSPEGDAIKPNIKSERNTIILREIPSATDPKDVEAIF--EGCGTVASVRSDVGDTWFVTMATEEDAVNTLLALRSKTFHDAPIKARLKSENVLRSFLPEST 176

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4187.10749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KRS0_9PHAE	9.980e-150	52.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LL21_ECTSI	1.250e-127	50.08	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S4DKN7_HETAK	1.360e-66	65.17	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A836CHL1_9STRA	2.120e-64	64.00	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A0W8DNS3_PHYNI	1.660e-55	60.11	Ammonium Transporter (Amt) Family n=1 Tax=Phytopht...	[more]
A0A2P4XI52_9STRA	5.340e-55	59.79	Uncharacterized protein n=1 Tax=Phytophthora palmi...	[more]
G4YGZ8_PHYSP	1.660e-53	59.47	Uncharacterized protein n=5 Tax=Phytophthora TaxID...	[more]
H3GMU1_PHYRM	5.100e-53	59.04	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
D0NY71_PHYIT	1.490e-52	59.26	Uncharacterized protein n=9 Tax=Phytophthora TaxID...	[more]
A0A024TXK9_9STRA	1.500e-52	61.63	HTH La-type RNA-binding domain-containing protein ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 83..163 e-value: 6.2E-19 score: 78.9
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 89..144 e-value: 3.4E-18 score: 65.4
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 79..168 score: 20.056
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 157..240 e-value: 1.7E-5 score: 26.8
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 78..156 e-value: 2.3E-20 score: 74.1
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 79..431
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 165..238 score: 9.542
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 158..243
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 81..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4187	contig	H-paniculata_contig4187:1230..11507 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4187.10749.1	mRNA_H-paniculata_contig4187.10749.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4187 1230..12630 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4187.10749.1 ID=prot_H-paniculata_contig4187.10749.1|Name=mRNA_H-paniculata_contig4187.10749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=660bp
MRMSAEEMSPALVESGGEHIVSGIGAAPAAEMAVVRQQQADAILVSSAKG
SNLTTVSSQPTATTVVAEGLATPPLPEEPLQGKELLEAIKKQVEFYFSRQ
NLQTDGFLVSQMNAHMCVPVAVIAQFHKIQQLTSDIGLIVESVKDSTVCA
VTPDGIKPSIKQERNTIILREIPSETPEEKIRNLFTGEGVAPIRSIRSDV
GDTWFVTMDSEDDAFSTILALRSKNFEGKSIKARLKSENILRSFFPVPTA
AEVQPTAAAAAAAPYGMGGPPGSAGGVMPGMPYGMPGMGAPMMNGQPSYG
YPGPGARGMFGNGGNMMMQGGPGGMRFGGMQHSGMVQQQGASGRGGGMMA
PRGAGGMQMGGMGGMHGHQGHRMGQQHLGMGMNPKQLHQQQQQLQQQQQH
QHQQQHHQQRPQQGDGRGEKKGSLRDAQQGVVAVGNGGMGLGHGYGQGQQ
QQRGAGVEGRGSDRPRKGDRTANTLQGRGEGGRGGAKTRNSTGRDMLSAA
NFPPLPGADSLAAATGAGAAGGVARSMPPGAPVVEDQVVAGSPRSEGGIE
GSAVGAVPPAVAAAGYQGTFIQYQQDEILKIVSSLSQVDVAVVPGVEDIG
QHSLVFEREANVGLLMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGS
YMYGEGHEQG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006630	La_HTH
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR036388	WH-like_DNA-bd_sf
IPR000504	RRM_dom
IPR035979	RBD_domain_sf
IPR036390	WH_DNA-bd_sf