prot_H-paniculata_contig4185.10748.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4185.10748.1
Unique Nameprot_H-paniculata_contig4185.10748.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2030
Homology
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BLAST of mRNA_H-paniculata_contig4185.10748.1 vs. uniprot
Match: A0A6H5KKD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD4_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 9.210e-29
Identity = 187/571 (32.75%), Postives = 219/571 (38.35%), Query Frame = 0 
Query:   27 GGGGDVSLRDEMAKAFSRQGPAAPGWRERWRFGGAMPGSRAALGVWDDAAAL----LDEEAKSTAAGNTDAPLSGKVDTAREVTEWARRIQASIESMNKLVDGFQIAGGSTSGGTGNSASRGENSTAPPRSAISSSPG-GVGDAMTSGAFGVVFGGSSNSHHSPPGDGRGKEVAA-----------------SSFASDVQSFASAQLGFRRGLEGLLADRSRDKRRLAPVAVPARVTTGDSLLHDASRDLDGAAAAAMAAANSKDEVGAMGDVSLSDESVGRAG-GTGGGSADSPPGERRGISEATLSSTSXXXXXXXXXXXXXXXXTVGVGSASVQMTSFRAADASADTLEAMGERLLGSRFSSGHANRRVEPKRLFDLSSSTDDAPPAGSSLSISISEASVTAAAAGGIPNPASTPSATTFDDDRSAGWEETKGDWQEWRDAAVVDNDERSXXXXXXXXXXXXXRGSREGRA-----------GHVEGXXXXXXXXWREGSVTSWSSNSFGPDLQAEIESLEALAASLQQRNMRFDPKPALLVQQQQELEEHRRAIRAASVTGSSLSTS 563
            GG   VS   E+A+  SR+GPA PGW  RWR   AMPGSRAALG+W+ A  L     DE      AG+  +P  G  DTA+EVTEWARRIQASIE+MN+LVDGFQ+AG    G +  S S    +   P S++S  P    GDA+ SG   V    +S++  S     RG E A                  S  A   + FASAQ GFRRGLEGL+                                              K  VG  G  S +  S  RAG G+G  +   PPGE            S                   VG  S       +   S   LE +  R   +   S   +                 A   G                                    +  W+                                    S  GRA           G    XXXXXXXX              GPDL+AEI SLEALA SLQQR MRF+PKPALLVQQQQELEEHRRAIRA SV GS  S S
Sbjct:  356 GGADAVSWDRELARTLSREGPAVPGWTSRWRQP-AMPGSRAALGLWEGAGGLDVVERDEAGVVEIAGSV-SPGDGAADTAQEVTEWARRIQASIENMNRLVDGFQLAG---DGSSSTSRSEAAGTVTSPDSSMSGVPRRDDGDALYSG---VTADSASHATVSRSRGSRGVERAVVGAAXXXXXXXXXXXXXSLSAYGFEGFASAQQGFRRGLEGLV----------------------------------------------KSGVGGGGGASQTGFSSSRAGFGSGSATCTLPPGEPAAXXXXXXXGGSD------------------VGGTSASGVGRTSRSFSPPALEGVDGRPSTAEHHSADGSHEXXXXXXXXXXXXXXXAKGDG------------------------------------AVRWKGXXXXXXXXXXXXXXXXXXXXIKPFVRSSLSSSSASSVMGRADAVLAEAARGIGLXXXXXXXXXXXXXXXXXXXXXXXXLGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRRAIRATSVAGSLSSNS 818
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BLAST of mRNA_H-paniculata_contig4185.10748.1 vs. uniprot
Match: D7FKL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.470e-13
Identity = 45/69 (65.22%), Postives = 52/69 (75.36%), Query Frame = 0 
Query:   62 MPGSRAALGVWDDAAALLDEEAKSTAAGNTDAPLSGKVDTAREVTEWARRIQASIESMNKLVDGFQIAG 130
            MPGSRAALG+W+ A  L  +EA         +P  G VDTA+EVTEWARRIQASIESMN+LVDGFQ+AG
Sbjct:    1 MPGSRAALGLWERAGGLDGDEAGVVETAGGVSPRGGTVDTAQEVTEWARRIQASIESMNRLVDGFQLAG 69
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4185.10748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKD4_9PHAE9.210e-2932.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL2_ECTSI1.470e-1365.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 505..525
NoneNo IPR availableCOILSCoilCoilcoord: 536..556

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4185contigH-paniculata_contig4185:6332..14902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4185.10748.1mRNA_H-paniculata_contig4185.10748.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4185 6332..14904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4185.10748.1 ID=prot_H-paniculata_contig4185.10748.1|Name=mRNA_H-paniculata_contig4185.10748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2030bp
DTPTSVSSSSVMGRYRAGGAEDGSSSGGGGDVSLRDEMAKAFSRQGPAAP
GWRERWRFGGAMPGSRAALGVWDDAAALLDEEAKSTAAGNTDAPLSGKVD
TAREVTEWARRIQASIESMNKLVDGFQIAGGSTSGGTGNSASRGENSTAP
PRSAISSSPGGVGDAMTSGAFGVVFGGSSNSHHSPPGDGRGKEVAASSFA
SDVQSFASAQLGFRRGLEGLLADRSRDKRRLAPVAVPARVTTGDSLLHDA
SRDLDGAAAAAMAAANSKDEVGAMGDVSLSDESVGRAGGTGGGSADSPPG
ERRGISEATLSSTSSGGSDGGEDGQDGREGTVGVGSASVQMTSFRAADAS
ADTLEAMGERLLGSRFSSGHANRRVEPKRLFDLSSSTDDAPPAGSSLSIS
ISEASVTAAAAGGIPNPASTPSATTFDDDRSAGWEETKGDWQEWRDAAVV
DNDERSSSRRFSASAAGGGRGSREGRAGHVEGGGGAGGGGWREGSVTSWS
SNSFGPDLQAEIESLEALAASLQQRNMRFDPKPALLVQQQQELEEHRRAI
RAASVTGSSLSTSAEGLAERFGLPRRGPSAGRVAVAAAAATEGSPDHNPT
RIAPAPAPAASPSSLANVQDVMDSLMQHPRPAGDTRPSSARGGASEGRQT
APSESAASSMDSYENILQELHKLKATVADLAPTPNFRSPPATPPPAIPPP
PTAPGGATGMVDGASETEAPGATLPGGSPAVAEEERTARVGLPSRWWRGD
GSVGSSGEGLEWERQRAHRQWESTSSTQVRRSPSTSLRESAASEGADEKE
RMVESSREEEKGEAGEKTAGMGDRKHGWGGRDADAQKALAGMTSMSGSDY
YPGDDMASNVSGAWSLPSSPAPSVGRGTDDSHSSGGGNSTDAAQSRSQPS
RLTHSMLAAVRTVGLTPVAEMSPLTATPQGGPESSKFHAARGSTRVGMGV
EARSWQDEDKEPASDGGVVASPSSATAARLPSDDGIEVGYDIYADRGGGS
GVGVRLYDAPGTLDNDDSGDGKSDGAGDARRGRVWDVMPRRRRHGTAQKG
TSMESEHSSSEAFDDDSDDSSRTGYLDRRVGERSGGDDSSRDDGKLDIRA
ASSPDSIAAAGGAGASVQQAARVIVRGSSDIAADEASGEPLPDDTGRSER
GQSRVSEQDQGSERAFAIAPTVAAATTAAAVAPAESESNNPNLSIDADIA
QEESSYSISRPPLGELSPLEAPGWGSLAEYIEGGSIRSTEESGIDWRDNS
ILNEQQQQTARLKGAVGTLDDVSERVGSVGGGRWREILVHEFGTHTAGST
TDDEGEHKGDVGDRVGIESNDQPSNAATATAPDDSLVLTETTDAEASREE
QASPVAERERWGADTTNDKLLSARTRHDSDDDDGNKESWRGSLWRDGDRE
TAGREDAALNADGEQDRGGINYIGVAEQLRMSKEARIHRREFDGAAGSGG
GGGSGGDGSDARSHDESKNLSLEQSGDGVDTGLGGDGVEERKYAQSWREE
KSGAATGLDGDGVEERKYAQSWRHQIPGAATRLDGDGVEERKYSQSWRQD
VSEAWREGMGPGGSATSTSGAAAVAAATDTAIANEIRDEFTDLIDHQVWT
DENGSSSSNSARASSEMDEVTRNAISDNDDRCHSPRPYASISAYRTPTPA
YDTTATSDETEHSDNGAGSNAFADISGGGGAALGLFGGGDITSINDSYAG
DGEDGDSRESDDRSSVAAPPGVGSSGGGGGDAANREEVGSYGSNDDVHDD
DGDGDEEVEFSEMLSGLASREGNRTLNSTSENNDGNDPLDYSWLLSEFQR
RERRKEKGEGSSQSSLQSEAARSAATGELDPARVTVTAGSHGNTDSPNDA
SVTGGRSHSPSGAEATAAAAGERIYPASSLASWSRNSQNISMANTDADNA
LAGRSKSNEASGTAAGGSNGGAASLTEDSLKVSEPSEDSLSALVWSSRGG
ADTSMDQEPSPRASVARAWVMAGDTNTGVAHGVPPENDRSPHDSYDSQRD
EDEGRTGDLASFFNSRAESFISRSREREMA
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