prot_H-paniculata_contig41846.10745.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41846.10745.1
Unique Nameprot_H-paniculata_contig41846.10745.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
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BLAST of mRNA_H-paniculata_contig41846.10745.1 vs. uniprot
Match: D7G8R8_ECTSI (CNH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R8_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.420e-28
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:    1 MSVLGSVNVLSIHERYAYELFSWGDYEGAVGHFLTAETPIEHVLSLFPSLAPPEFVP 57
            MSVLGSVNVLSIHERYAY+LFSWGDYEGAVGHFL AETP++HVLSLFPSLAPPEFVP
Sbjct:  371 MSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVP 427
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BLAST of mRNA_H-paniculata_contig41846.10745.1 vs. uniprot
Match: A0A835YS55_9STRA (CNH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS55_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.640e-16
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 0 
Query:    2 SVLGSVNVLSIHERYAYELFSWGDYEGAVGHFLTAETPIEHVLSLFPSLAPPE 54
            ++LG V + ++HERYAY+LFSWGDYEGAV HFL A  P+ HV+ LFPSL PP+
Sbjct:  381 ALLGGVAIPTVHERYAYDLFSWGDYEGAVSHFLQAGAPLPHVVGLFPSLLPPD 433
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BLAST of mRNA_H-paniculata_contig41846.10745.1 vs. uniprot
Match: F0YJL4_AURAN (CNH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJL4_AURAN)

HSP 1 Score: 55.1 bits (131), Expect = 2.380e-7
Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:   10 LSIHERYAYELFSWGDYEGAVGHFLTAETPIEHVLSLFPSLAPPE 54
            L I ERYAY L+S GD+EGA  H+L AE   E V  LFPS+ PPE
Sbjct:  432 LIIEERYAYALYSRGDFEGASQHWLNAEAAPEAVAELFPSICPPE 476
[Close]
BLAST of mRNA_H-paniculata_contig41846.10745.1 vs. uniprot
Match: F0YIN5_AURAN (CNH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN5_AURAN)

HSP 1 Score: 54.3 bits (129), Expect = 4.460e-7
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:   12 IHERYAYELFSWGDYEGAVGHFLTAETPIEHVLSLFPSLAPPE 54
            + ERYAY L+S GD+EGA  H+L AET  + V  LFPS+ PPE
Sbjct:  606 VEERYAYALYSRGDFEGASQHWLNAETAPQAVADLFPSIRPPE 648
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41846.10745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G8R8_ECTSI2.420e-2892.98CNH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YS55_9STRA2.640e-1664.15CNH domain-containing protein n=1 Tax=Tribonema mi... [more]
F0YJL4_AURAN2.380e-760.00CNH domain-containing protein n=1 Tax=Aureococcus ... [more]
F0YIN5_AURAN4.460e-758.14CNH domain-containing protein n=1 Tax=Aureococcus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41846contigH-paniculata_contig41846:1154..1324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41846.10745.1mRNA_H-paniculata_contig41846.10745.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41846 1154..1342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41846.10745.1 ID=prot_H-paniculata_contig41846.10745.1|Name=mRNA_H-paniculata_contig41846.10745.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MSVLGSVNVLSIHERYAYELFSWGDYEGAVGHFLTAETPIEHVLSLFPSL
APPEFVP
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