mRNA_H-paniculata_contig11681.1075.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: D7FZS6_ECTSI (Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZS6_ECTSI) HSP 1 Score: 444 bits (1141), Expect = 1.750e-136 Identity = 274/626 (43.77%), Postives = 321/626 (51.28%), Query Frame = 2 Query: 2483 GLVEAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*TESHYPVDVSAIFKAKEQCREKFLRLECKVMCLLRVYQGSFTLLGIFNHKFCGECVFQFLATNAFNVLIDVIVKANFSKMLKGSRTRQGRQIDQNQTRLKRS*EPGARPAARGVRHDRNMTRLFF*RCNKRFCSLKARFLFSSCRSFTFPFPR*DATLLKCSFMITAGYRHEPPRADLECPRSQVGLSHCPSGVQL*GDHAKAETFVGKEMEEAPKFVKTDDACIVTVETSQLLCMELFTGYPPLGRFAVREMRWTIAVGVVKSAEKKRGAAKIVK 4357 G + HIN VV+G VDAG ST GHL YKC I K TI KFEKE ELGK+SFKYAWVLD LKAE E G+ +I L FE+P +T+I A GHRDFIKNMI GTS+ADVAVL+VASGVGEFE GI K G R+ LLAFTLGVKQ+IVCINK+DD SVMY + Y IK V IYL+ +GY+ KIPFVPIS WA DNM DKS N+PWYK PYLLEALDT KEP RPTDK LRL LQDVY++GGI VPVGR ETG LKPGM VTFA L+TEV+S+EM++E AVPGD VGFNVK +S DIRR YVA D ++DPP GAS AFN + V + H ++ + A +L C A + C ++ K + GK MEE PKFVKT DAC+V +E S+ +C+E F YPPLGRFAVR+MR T+AVGV+KS EKK + K K Sbjct: 2 GKEKIHINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGCLKPGMVVTFAPCMLDTEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAS----------------------------------------------------------------------------------------AFNAQVIV------------------------------------------MNHPGQISNGY-------------------------------APVLDCH------------TAHVACKFKEITQ--------------KMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVSTKKKK 440
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: A0A836CC12_9STRA (Elongation factor 1-alpha n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC12_9STRA) HSP 1 Score: 430 bits (1105), Expect = 1.580e-131 Identity = 269/628 (42.83%), Postives = 316/628 (50.32%), Query Frame = 2 Query: 2483 GLVEAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*TESHYPVDVSAIFKAKEQCREKFLRLECKVMCLLRVYQGSFTLLGIFNHKFCGECVFQFLATNAFNVLIDVIVKANFSKMLKGSRTRQGRQIDQNQTRLKRS*EPGARPAARGVRHDRNMTRLFF*RCNKRFCSLKARFLFSSCRSFTFPFPR*DATLLKCSFMITAGYRHEPPRADLECPRSQVGLSHCPSGVQL*GDHAKAETFVGKEMEEAPKFVKTDDACIVTVETSQLLCMELFTGYPPLGRFAVREMRWTIAVGVVKSAEKKRGAAKIVKTK 4363 G + HIN VV+G VDAG ST GHL YKC I K TI KFEKE ELGK+SFKYAWVLD LKAE E G+ +I L FETP YT+I A GHRDFIKNMI GTS+ADVA+L+VASGVGEFE GI K G R+ LLA+TLGVKQ+IVCINK+DD SVMY + YN IK VT YL+ +GY+ KIPFVPIS WA DNM ++S N+PWYK P+LLEALD+ P RPTDK LRL LQDVY++GGI VPVGR ETG+LKPGM V FA + TEV+S+EM++E A A+PGD VGFNVK +S DIRR VA D + DPP GA+ AQ + + NH PG I GY P D +H K + GK MEE PKF+K DA +VT+E S+ LC+E F+ YPPLGRFAVR+MR T+AVGV+KS EKK AAK K K Sbjct: 2 GKEKVHINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKSSFKYAWVLDNLKAERERGITIDIALWKFETPKFNYTVIDAPGHRDFIKNMITGTSQADVAMLVVASGVGEFEAGISKDGQTREHALLAYTLGVKQMIVCINKMDDSSVMYGEARYNEIKEEVTNYLKKVGYKPVKIPFVPISGWAGDNMIERSENMPWYKGPFLLEALDSCMPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPTGVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPVGAA--------------NFHAQVI-------------------------------------------------VMNH-------------------------------------------------------PG---------------------------------------------------------QIGNGYS---PVLDCHTAHVACKFAHITQ---------KMDRRSGKVMEENPKFIKNGDAAMVTLEPSKPLCVESFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKVEAAKGAKKK 442
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: A0A6V1U2Y4_HETAK (Elongation factor 1-alpha n=2 Tax=Sar TaxID=2698737 RepID=A0A6V1U2Y4_HETAK) HSP 1 Score: 409 bits (1050), Expect = 4.760e-124 Identity = 257/628 (40.92%), Postives = 309/628 (49.20%), Query Frame = 2 Query: 2483 GLVEAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*TESHYPVDVSAIFKAKEQCREKFLRLECKVMCLLRVYQGSFTLLGIFNHKFCGECVFQFLATNAFNVLIDVIVKANFSKMLKGSRTRQGRQIDQNQTRLKRS*EPGARPAARGVRHDRNMTRLFF*RCNKRFCSLKARFLFSSCRSFTFPFPR*DATLLKCSFMITAGYRHEPPRADLECPRSQVGLSHCPSGVQL*GDHAKAETFVGKEMEEAPKFVKTDDACIVTVETSQLLCMELFTGYPPLGRFAVREMRWTIAVGVVKSAEKKRGAAKIVKTK 4363 G + H+N VV+G VDAG ST GHL YKC I K TI KFEKE ELGK+SFKYAWVLD LKAE E G+ +I L FETP YT+I A GHRDFIKNMI GTS+ADVA+L+VASGVGEFE GI K+G R+ LLAFTLGVKQ+IV +NK+DD SVMY QG Y+ I V+ YL+ +GY+ KIPF+PIS W DNM +KS N+ WYK P LLEALD P RPTDK LRL LQDVY++GGI VPVGR ETG++KPGM V FA + TEV+S+EM++E AVPGD VGFNVK +S DI+R VA D + DP G + AQ + I NH PG I GY L+C + V ++ + GK +EE PKFVK DACI T+E S+ +C+E F+ YPPLGRFAVR+MR T+AVGV+K+ EKK G K K Sbjct: 2 GKEKIHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKSSFKYAWVLDNLKAERERGITIDIALWKFETPKFHYTVIDAPGHRDFIKNMITGTSQADVALLVVASGVGEFEAGISKEGQTREHGLLAFTLGVKQMIVGVNKMDDSSVMYGQGRYDEIMTEVSAYLKKVGYKPAKIPFIPISGWNGDNMIEKSPNMAWYKGPTLLEALDNVNPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVQFAPNGICTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIKRGNVASDSKNDPAMGCA--------------NFTAQVI-------------------------------------------------IMNH-------------------------------------------------------PG---------------------------------------------------------QIQKGYSPV-----LDCHTAHVACKFADISQKM-------DRRSGKTLEENPKFVKNGDACIATLEPSKPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKEGGKSAAKKK 442
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: A0A7S3ZS59_9STRA (Elongation factor 1-alpha (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZS59_9STRA) HSP 1 Score: 402 bits (1033), Expect = 3.670e-123 Identity = 204/322 (63.35%), Postives = 236/322 (73.29%), Query Frame = 2 Query: 2492 EAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 3454 + HIN VV+G VDAG ST GHL YKC I K TI KFEKE ELGKASFKYAWVLD LKAE E G+ +I L FE+P +T+I A GHRDFIKNMI GTS+AD+A+L++ S VG FE GI K G R+ LLAFTLGVKQ+IV NK+DD SV Y +G Y IKA V+ YL+ +GY+ KIPFVPIS W DNM DKS N+PWYK PYLLEALD P RP+DK LRL LQDVY++GGI VPVGR ETGI+KPGM TFA V + TEV+S+EM++E AVPGD VGFNVK +S DIRR V D +KDPP GAS Sbjct: 10 KTHINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKASFKYAWVLDNLKAERERGITIDIALWKFESPKFYFTVIDAPGHRDFIKNMITGTSQADIAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVACNKMDDVSVKYGEGRYKEIKAEVSTYLKKVGYKPMKIPFVPISGWMGDNMIDKSTNMPWYKGPYLLEALDNANPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVCTFAPVQITTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGNVCGDSKKDPPKGAS 331
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: H3G8M4_PHYRM (Elongation factor 1-alpha n=42 Tax=Peronosporaceae TaxID=4777 RepID=H3G8M4_PHYRM) HSP 1 Score: 405 bits (1040), Expect = 1.110e-122 Identity = 256/627 (40.83%), Postives = 314/627 (50.08%), Query Frame = 2 Query: 2483 GLVEAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*TESHYPVDVSAIFKAKEQCREKFLRLECKVMCLLRVYQGSFTLLGIFNHKFCGECVFQFLATNAFNVLIDVIVKANFSKMLKGSRTRQGRQIDQNQTRLKRS*EPGARPAARGVRHDRNMTRLFF*RCNKRFCSLKARFLFSSCRSFTFPFPR*DATLLKCSFMITAGYRHEPPRADLECPRSQVGLSHCPSGVQL*GDHAKAETFVGKEMEEAPKFVKTDDACIVTVETSQLLCMELFTGYPPLGRFAVREMRWTIAVGVVKSAEKK----RGAAK 4348 G + HI+ VV+G VDAG ST GHL YKC I K TI KFEKE ELGK SFKYAWVLD LKAE E G+ +I L FE+P +T+I A GHRDFIKNMI GTS+AD A+L+VASGVGEFE GI K+G R+ LLAFTLGVKQ+IV INK+DD SVMY Q Y IK VT YL+ +GY+ KIPFVPIS W DNM +KS N+PWYK PYLLEALDT P RP+DK LRL LQDVY++GGI VPVGR ETG++KPGM TF V L TEV+S+EM++E AVPGD VGFNVK +S ++RR +VA D + DP G AQ + + NH G+ N ++ ++D C + A + C ++ K + GK +E APKFVK+ DAC+V +E S+ + +E F+ YPPLGRFAVR+MR T+AVGV+KS KK +GAAK Sbjct: 2 GKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPYLLEALDTLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQ--------------DFTAQVI-------------------------------------------------VLNHP--GQI------GNGYSPVLD-------------------------------------------------------------------------CHT-----------------------------AHVACKFKEIT--------------EKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFSQYPPLGRFAVRDMRQTVAVGVIKSVNKKDHTAKGAAK 441
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: A0A7S3K0G6_9STRA (Elongation factor 1-alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0G6_9STRA) HSP 1 Score: 404 bits (1038), Expect = 2.290e-122 Identity = 253/624 (40.54%), Postives = 306/624 (49.04%), Query Frame = 2 Query: 2492 EAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*TESHYPVDVSAIFKAKEQCREKFLRLECKVMCLLRVYQGSFTLLGIFNHKFCGECVFQFLATNAFNVLIDVIVKANFSKMLKGSRTRQGRQIDQNQTRLKRS*EPGARPAARGVRHDRNMTRLFF*RCNKRFCSLKARFLFSSCRSFTFPFPR*DATLLKCSFMITAGYRHEPPRADLECPRSQVGLSHCPSGVQL*GDHAKAETFVGKEMEEAPKFVKTDDACIVTVETSQLLCMELFTGYPPLGRFAVREMRWTIAVGVVKSAEKKRGAAKIVKT 4360 + H+N VV+G VDAG ST GHL YKC I K TI KFEKE ELGKASFKYAWVLD LKAE E G+ +I L FE+P +T+I A GHRDFIKNMI GTS+ADVA+L++ S VG FE GI K G R+ LLAFTLGVKQ+IV +NK+DD SV Y + Y IK V+ YL+ +GY+ KIPFVPIS W DNM DKS N+PWYK P+LLEALD P RPTD+ LRL LQDVY++GGI VPVGR ETG+LKPGM VTFA L TEV+S+EM++E AVPGD VGFNVK +S ++RR YVA D + DP GA+ AQ + I NH PG I+AGY L+C + V + K + GK MEE PKFVK+ DAC+ T+ ++ LC+E F YPPLGRFAVR+MR T+AVGV+K+ K K K+ Sbjct: 5 KTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKASFKYAWVLDNLKAERERGITIDIALWKFESPKYYFTVIDAPGHRDFIKNMITGTSQADVAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVAMNKMDDVSVKYGEARYKEIKQEVSSYLKKVGYKPMKIPFVPISGWMGDNMIDKSANMPWYKGPFLLEALDNVNPPKRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTQLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGAA--------------SFYAQVI-------------------------------------------------IMNH-------------------------------------------------------PG---------------------------------------------------------QISAGYSPV-----LDCHTAHVACKFSEL-------NQKMDRRSGKVMEENPKFVKSGDACMTTLVPTKPLCVESFADYPPLGRFAVRDMRQTVAVGVIKNVTKAEKDGKATKS 441
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: W7T3J7_9STRA (Elongation factor 1-alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3J7_9STRA) HSP 1 Score: 401 bits (1031), Expect = 1.900e-121 Identity = 202/325 (62.15%), Postives = 239/325 (73.54%), Query Frame = 2 Query: 2483 GLVEAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 3454 G + H+N VV+G VDAG ST GHL YKC I K I KFEKE ELGK+SFKYAWVLD LKAE E G+ +I L FE+P +TII A GHRDFIKNMI GTS+ADVA+LIVASG GEFE GI K G R+ LLAFTLGVKQ+IVC+NK+DD SV Y + +N IK V+ YL+ +GY+ K+PF+PIS W DNM D+S N+ WYK P LLEALD P RPTDK LRL LQDVY++GGI VPVGR ETG+LKPGM VT A + TEV+S+EM++E A A+PGD VGFNVK +S +IRR YVA D +KDPP GA+ Sbjct: 2 GKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAA 326
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: A0A485KD22_9STRA (Elongation factor 1-alpha n=33 Tax=Eukaryota TaxID=2759 RepID=A0A485KD22_9STRA) HSP 1 Score: 398 bits (1023), Expect = 2.530e-120 Identity = 201/320 (62.81%), Postives = 234/320 (73.12%), Query Frame = 2 Query: 2492 EAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTG 3448 + HI+ VV+G VDAG ST GHL YKC I K TI KFEKE ELGK+SFKYAWVLD LKAE E G+ +I L FE+P +T+I A GHRDFIKNMI G SKAD A+L+VASGVGEFE GI K G R+ LLAFTLGV+Q+IV INK+DD SVMY + YN IK VT YL+ +GY+ KIPFVPIS W DNM +KS N+PWYK PYLLEALD P RPTDK LRL LQDVY++GGI VPVGR ETG+LKPGM V F L TEV+S+EM++E AVPGD VGFNVK +S ++RR +VA D + DP G Sbjct: 5 KTHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGPSKADAAILVVASGVGEFEAGISKDGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGESRYNEIKEEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSANMPWYKGPYLLEALDGLNPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFGPSGLSTEVKSVEMHHESMPEAVPGDNVGFNVKNISVKELRRGFVASDSKNDPAKG 324
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: A0A7R9UA66_9STRA (Elongation factor 1-alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA66_9STRA) HSP 1 Score: 398 bits (1022), Expect = 2.560e-120 Identity = 203/324 (62.65%), Postives = 237/324 (73.15%), Query Frame = 2 Query: 2483 GLVEAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMYQGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGAS 3454 G + H+N VV+G VDAG ST GHL YKC I K TI KFEKE ELGK SFKYAWVLD LKAE E G+ +I L FETP YT+I A GHRDFIKNMI GTS+ADVA+LIVASG GEFE GI K G R+ LLA+TLGVKQ+IV +NKID + + YN IK+ VT YL+ +GY+ KIPFVPIS W DNM +KS N+PWYK P LLEALD K P RP+DK LRL LQDVY++GGI VPVGR ETG+LKPGM VTFA V ++TEV+S+EM++E AVPGD VGFNVK +S DI+R YVA D + DP G + Sbjct: 2 GKEKIHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDNLKAERERGITIDIALWKFETPKYHYTVIDAPGHRDFIKNMITGTSQADVALLIVASGAGEFEAGISKDGQTREHALLAYTLGVKQMIVGVNKIDSANYA-EDRYNEIKSEVTGYLKKVGYKPAKIPFVPISGWVGDNMIEKSSNMPWYKGPCLLEALDAVKPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVGVQTEVKSVEMHHESLPQAVPGDNVGFNVKNVSVKDIKRGYVASDSKNDPAQGCT 324
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Match: M4BSJ0_HYAAE (Elongation factor 1-alpha n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BSJ0_HYAAE) HSP 1 Score: 400 bits (1027), Expect = 2.690e-120 Identity = 249/623 (39.97%), Postives = 310/623 (49.76%), Query Frame = 2 Query: 2483 GLVEAHINAVVVGDVDAGMSTIAGHLTYKCSFITKFTIGKFEKETTELGKASFKYAWVLDTLKAEHEYGVMTNITLRAFETPTCTYTIIHALGHRDFIKNMIMGTSKADVAVLIVASGVGEFEVGIPKKG*ARKRTLLAFTLGVKQLIVCINKIDDPSVMY-QGHYNGIKANVTIYLRDIGYRSTKIPFVPISRWARDNMFDKSINIPWYKNPYLLEALDTTKEPARPTDKLLRLLLQDVYRVGGIDMVPVGRTETGILKPGMAVTFASVTLETEVQSMEMNNEVPAAAVPGDIVGFNVKKLSTTDIRRRYVADDPQKDPPTGASMVKLAYRMFLHFGFGLQAQRVSSL*TESHYPVDVSAIFKAKEQCREKFLRLECKVMCLLRVYQGSFTLLGIFNHKFCGECVFQFLATNAFNVLIDVIVKANFSKMLKGSRTRQGRQIDQNQTRLKRS*EPGARPAARGVRHDRNMTRLFF*RCNKRFCSLKARFLFSSCRSFTFPFPR*DATLLKCSFMITAGYRHEPPRADLECPRSQVGLSHCPSGVQL*GDHAKAETFVGKEMEEAPKFVKTDDACIVTVETSQLLCMELFTGYPPLGRFAVREMRWTIAVGVVKSAEKKRGAAK 4348 G + HI+ VV+G VDAG ST GHL YKC I K TI KFEKE ELGK SFKYAWVLD LKAE E G+ +I L FE+P +T+I A GHRDFIKNMI GTS+AD A+L+VASGVGEFE GI K+G R+ LLAFTLGVKQ++V INK+DD SVMY Q Y IK+ VT YL+ +GY+ KIPFVPIS W DNM ++S N+ WYK PYLLEALD P RP+DK LRL LQDVY++GGI VPVGR ETG++KPGM TF V L TEV+S+EM++E A+PGD VGFNVK +S ++RR +VA D + DP G AQ + + NH G+ N ++ ++D C + A + C ++ K + GK +E APKFVK+ DAC+V +E S+ + +E F YPPLGRFAVR+MR T+AVGV+KS KK +AK Sbjct: 46 GKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMVVAINKMDDSSVMYGQARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIERSPNMAWYKGPYLLEALDNLNPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEALPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQ--------------DFTAQVI-------------------------------------------------VLNHP--GQI------GNGYSPVLD-------------------------------------------------------------------------CHT-----------------------------AHVACKFKEIT--------------EKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFAEYPPLGRFAVRDMRQTVAVGVIKSVNKKEASAK 481 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11681.1075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11681.1075.1 >prot_H-paniculata_contig11681.1075.1 ID=prot_H-paniculata_contig11681.1075.1|Name=mRNA_H-paniculata_contig11681.1075.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp MWKQASQDLWNVLRFTTSGSANNVVKKFEGKRPDDGTGDGQAVWNPLVDKback to top mRNA from alignment at H-paniculata_contig11681:204..7704+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11681.1075.1 ID=mRNA_H-paniculata_contig11681.1075.1|Name=mRNA_H-paniculata_contig11681.1075.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7501bp|location=Sequence derived from alignment at H-paniculata_contig11681:204..7704+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11681:204..7704+ >mRNA_H-paniculata_contig11681.1075.1 ID=mRNA_H-paniculata_contig11681.1075.1|Name=mRNA_H-paniculata_contig11681.1075.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig11681:204..7704+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |