prot_H-paniculata_contig41839.10742.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41839.10742.1
Unique Nameprot_H-paniculata_contig41839.10742.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length223
Homology
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: R7QK84_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QK84_CHOCR)

HSP 1 Score: 110 bits (274), Expect = 3.800e-24
Identity = 72/226 (31.86%), Postives = 113/226 (50.00%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRLFSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQ------QGIRLSGKLGVCSACEKGKASKQPVKKYRE----ERTLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSR 222
            W +DSGC+ H +T  R LF    Q+    +    K   NV G+G+VE ++           SNVL+VP+   S+LSV +MVS+G++  F  ++  + A    +    +   L+  D     N      +V  + LHER+ HV ++  +A         GI       +C AC  GKA++  + K R     +  L+LVH+D+ GP++ +S GG R+ I FVDD+S 
Sbjct:  275 WLVDSGCSAH-ITFDRSLFVTYEQMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQMVSKGLQVSFENEKCRVTAGPTVVATASQVGDLYILDVM---NETFSAHVVTLQTLHERMAHV-NVQGIASMIHNNVVNGINSDNHSPICPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDDHSN 495          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: R7QG27_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG27_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 4.390e-24
Identity = 72/226 (31.86%), Postives = 113/226 (50.00%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRLFSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQ------QGIRLSGKLGVCSACEKGKASKQPVKKYRE----ERTLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSR 222
            W +DSGC+ H +T  R LF    Q+    +    K   NV G+G+VE ++           SNVL+VP+   S+LSV +MVS+G++  F  ++  + A    +    +   L+  D     N      +V  + LHER+ HV ++  +A         GI       +C AC  GKA++  + K R     +  L+LVH+D+ GP++ +S GG R+ I FVDD+S 
Sbjct:   60 WLVDSGCSAH-ITFDRSLFVTYEQMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQMVSKGLQVSFENEKCRVTAGPIVVATASQVGDLYILDVM---NETFSAHVVTLQTLHERMAHV-NVQGIASMIHNNVVSGINSDNHSPICPACVFGKATRSVIPKQRSWSRAQNCLDLVHSDVCGPLEVQSVGGSRYFITFVDDHSN 280          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: R7QCG5_CHOCR (gag_pre-integrs domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCG5_CHOCR)

HSP 1 Score: 108 bits (269), Expect = 1.340e-23
Identity = 72/227 (31.72%), Postives = 114/227 (50.22%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRLFSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQ------QGIRLSGKLGVCSACEKGKASKQPVKKYRE----ERTLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRM 223
            W +DSGC+ H +T  R LF    ++    +    K   NV G+G+VE ++           SNVL+VP+   S+LSV ++VS+G++  F  D+  + A    +    +   LF  D     N      +V  + LHER+ HV ++  +A         GI       +C AC  GKA++  + K R     +  L+LVH+D+ GP++ +S GG R+ I FVDD+S +
Sbjct:  295 WLVDSGCSAH-ITFDRSLFVTYEEMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQIVSKGLQVSFEKDKCIVTAGPTVVATASQVGDLFILDVM---NETFSAHVVTLQTLHERMAHV-NVQGIASMIHNNVVSGINSDNHSLLCPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDDHSNL 516          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: R7QJV2_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJV2_CHOCR)

HSP 1 Score: 108 bits (270), Expect = 1.450e-23
Identity = 72/226 (31.86%), Postives = 112/226 (49.56%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRLFSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQ------QGIRLSGKLGVCSACEKGKASKQPVKKYRE----ERTLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSR 222
            W +DSGC+ H +T  R LF    Q+    +    K   NV G+G+VE ++           SNVL+VP+   S+LSV +MVS+G++  F  ++  + A    +        L+  D     N      +V  + LHER+ HV ++  +A         GI       +C AC  GKA++  + K R     +  L+LVH+D+ GP++ +S GG R+ I FVDD+S 
Sbjct:  275 WLVDSGCSAH-ITFDRSLFVTYEQMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQMVSKGLQVSFENEKCCVTAGPTVVATASLVGDLYILDVM---NETFSAHVVTLQTLHERMAHV-NVQGIASMIHNNVVSGINSDNHSPICPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDDHSN 495          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: R7QC71_CHOCR (Integrase catalytic domain-containing protein n=4 Tax=Chondrus crispus TaxID=2769 RepID=R7QC71_CHOCR)

HSP 1 Score: 108 bits (269), Expect = 1.690e-23
Identity = 73/226 (32.30%), Postives = 113/226 (50.00%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRLFSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQ------QGIRLSGKLGVCSACEKGKASKQPVKKYRE----ERTLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSR 222
            W +DSGC+ H +T  R LF    Q+    +    K   NV G+G+VE ++           SNVL+VP+   S+LSV ++VS+G++  F  ++  + A    +    +   LF  D     N      +V  + LHER+ HV ++  +A         GI       VC AC  GKA++  + K R     +  L+LVH+D+ GP++ +S GG R+ I FVDD+S 
Sbjct:  224 WLVDSGCSAH-ITFDRSLFVTYEQMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQIVSKGLQVSFENEKCLVTAGPTLVATASQVGDLFILDVM---NETFSAHVVTLQTLHERMAHV-NVQGIASMIHNNVVSGINSDNHSLVCPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDDHSN 444          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: A0A151QUV8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QUV8_CAJCA)

HSP 1 Score: 102 bits (254), Expect = 2.110e-21
Identity = 71/231 (30.74%), Postives = 123/231 (53.25%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRI-IFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRL----FSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQQGIRLSGKLGV------CSACEKGKASKQPV---KKYREERTLELVHTDIAGPVDK-SFGGCRFAIIFVDDYSRM 223
            W IDSGCT +H++  R+LF+ + +   S +       + V+G+G V     A EG   + + S+VLYVPE + ++LSV +++ +G +  F      I   K + GK+V  +R+    F+ D  + ++    +++ +T L H+RL H      +  ++   + G   +      C AC+ GK ++ P    K +R  + L+L+HTD+ GP+   S  G R+ IIF+DD +RM
Sbjct:  284 WLIDSGCT-NHMSYDRELFKELDKTALSKVRVGNGAYIAVKGKGTV-----AIEGQTGLKLISDVLYVPEINQNLLSVPQLLEKGYKVLFEDKNCII---KDSAGKEVFKVRMKGKSFALDFMSEEHAAVHKEVSNTILWHKRLGHFHHSALIFMKKNNMVRGLSDIEEESPTCIACQYGKQTRLPFPQNKTWRAIQNLQLIHTDVGGPMSTPSLNGSRYYIIFIDDMTRM 505          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: A0A2K3NI74_TRIPR (Uncharacterized protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NI74_TRIPR)

HSP 1 Score: 101 bits (251), Expect = 5.050e-21
Identity = 74/238 (31.09%), Postives = 127/238 (53.36%), Query Frame = 0
Query:    1 SSKSHVHWTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRI-IFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRL----FSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQQGIRLSG--KLGV----CSACEKGKASKQPVKK---YREERTLELVHTDIAGPVDK-SFGGCRFAIIFVDDYSRM 223
            S+ S   W IDSGCT +H+T  R+LF+ + + V S +       + V+G+G V     A EG   + + S+VL+VPE + ++LSV +++ +G + +F      I   K + G++V  +++    F+ D    +     +++  T L H+RL H      +  ++   ++   KL V    C AC+ GK  + P ++   +R  + L+LVHTD+ GP+   S  G ++ I F+DDYSRM
Sbjct:  324 SNYSTESWLIDSGCT-NHMTYDRELFRELDENVLSKVKIGNGAYIEVKGKGTV-----AIEGHTGLKLISDVLFVPEINQNLLSVPQLLEKGYKVFFEDKNCMI---KDSEGREVFKIQMKGKSFALDFMNKEQAAMHKEVSSTMLWHKRLGHFHHAALIFMKKNNLVNDLPKLEVMPPECIACQYGKQKRLPFQQNNTWRATQKLQLVHTDVGGPMKTPSLNGSKYYIAFIDDYSRM 552          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: A0A1Y1NAZ7_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NAZ7_PHOPY)

HSP 1 Score: 100 bits (250), Expect = 6.520e-21
Identity = 74/226 (32.74%), Postives = 114/226 (50.44%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRLFSN--DCTTPKNNEKRQQMVDTKLLHERLEHVRDL---PTVARQQGIRLSGKLGV--CSACEKGKASKQ--PVKKYREERTLELVHTDIAGPVDK-SFGGCRFAIIFVDDYSRM 223
            W IDSG +  HLT  ++  +NV +   S I  A +  L VE  GDVE    AA+   R++  NV YVP  + ++LSV +++S G +  F  +  ++   K   G  V    L +N      P NN     +  + + H RL H+ +     T    +G+   G+  V  C  C +GK ++   P K  R    L+++H+DI GP++  S GG R+ + F+DDYSRM
Sbjct:   44 WYIDSGAS-IHLTANKEWLKNVSKPYLSDIVAANQSRLVVECSGDVEIETVAADLQYRVLLKNVQYVPGLTTNLLSVSQLISNGNQVCFDNNGCEVYNPK---GILVATASLNNNVYKLNVP-NNGAGCLLASSNVWHRRLGHINNSYLNKTSKLVEGLVYKGRANVSNCQVCCQGKQTRTSFPNKGSRANGVLQVIHSDICGPMETVSLGGARYFLTFIDDYSRM 264          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: A0A1Y1N668_PHOPY (Uncharacterized protein (Fragment) n=3 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N668_PHOPY)

HSP 1 Score: 100 bits (250), Expect = 6.920e-21
Identity = 74/226 (32.74%), Postives = 114/226 (50.44%), Query Frame = 0
Query:    8 WTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRLFSN--DCTTPKNNEKRQQMVDTKLLHERLEHVRDL---PTVARQQGIRLSGKLGV--CSACEKGKASKQ--PVKKYREERTLELVHTDIAGPVDK-SFGGCRFAIIFVDDYSRM 223
            W IDSG +  HLT  ++  +NV +   S I  A +  L VE  GDVE    AA+   R++  NV YVP  + ++LSV +++S G +  F  +  ++   K   G  V    L +N      P NN     +  + + H RL H+ +     T    +G+   G+  V  C  C +GK ++   P K  R    L+++H+DI GP++  S GG R+ + F+DDYSRM
Sbjct:  277 WYIDSGAS-IHLTANKEWLKNVSKPYLSDIVAANQSRLVVECSGDVEIETVAADLQYRVLLKNVQYVPGLTTNLLSVSQLISNGNQVCFDNNGCEVYNPK---GILVATASLNNNVYKLNVP-NNGAGCLLASSNVWHRRLGHINNSYLNKTSKLVEGLVYKGRANVSNCQVCCQGKQTRTSFPNKGSRANGVLQVIHSDICGPMETVSLGGARYFLTFIDDYSRM 497          
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Match: A0A438JT24_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JT24_VITVI)

HSP 1 Score: 100 bits (250), Expect = 7.120e-21
Identity = 76/238 (31.93%), Postives = 124/238 (52.10%), Query Frame = 0
Query:    1 SSKSHVHWTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQGDVESLIWAAEGAMRI-IFSNVLYVPEASDSILSVERMVSQGMEGYFVGDEVDIQAAKRAIGKQVKFLRL----FSNDCTTPKNNEKRQQMVDTKLLHERLEHVRDLPTVARQ-----QGI-RLSGKLGVCSACEKGKASKQPV---KKYREERTLELVHTDIAGPV-DKSFGGCRFAIIFVDDYSRM 223
            +S S   W IDSGCT +H+T  + LF+ + + V S +       L V+G+G V     A EG   + + SNVLYVPE + ++LSV +++ +G +  F  ++  I  A+   G++V  +++    F+ D    +     ++  +T L H RL H      +  +     +G+  L  K   C AC+ GK ++ P    K +R  + L+LVHTD+ GP    S  G +F I F+DD++RM
Sbjct:  279 TSSSPETWLIDSGCT-NHMTYDQGLFKELDKTVTSKVRIGNGAYLAVKGKGTV-----AIEGHTGLKLISNVLYVPEINQNLLSVGQLLEKGYKVLFEDNQCMIADAQ---GREVFIVQMKGKGFALDLMQEEQTAIHKEESNTMLWHRRLGHFHHSALLFMKKNDLGEGLPELEVKPPTCVACQYGKQTRLPFPQNKAWRATQKLQLVHTDVGGPQRTPSLNGSKFYIAFIDDHTRM 507          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41839.10742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QK84_CHOCR3.800e-2431.86Integrase catalytic domain-containing protein n=2 ... [more]
R7QG27_CHOCR4.390e-2431.86Integrase catalytic domain-containing protein n=1 ... [more]
R7QCG5_CHOCR1.340e-2331.72gag_pre-integrs domain-containing protein n=1 Tax=... [more]
R7QJV2_CHOCR1.450e-2331.86Integrase catalytic domain-containing protein n=3 ... [more]
R7QC71_CHOCR1.690e-2332.30Integrase catalytic domain-containing protein n=4 ... [more]
A0A151QUV8_CAJCA2.110e-2130.74Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3NI74_TRIPR5.050e-2131.09Uncharacterized protein (Fragment) n=1 Tax=Trifoli... [more]
A0A1Y1NAZ7_PHOPY6.520e-2132.74Integrase catalytic domain-containing protein (Fra... [more]
A0A1Y1N668_PHOPY6.920e-2132.74Uncharacterized protein (Fragment) n=3 Tax=Photinu... [more]
A0A438JT24_VITVI7.120e-2131.93Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41839contigH-paniculata_contig41839:401..1156 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41839.10742.1mRNA_H-paniculata_contig41839.10742.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41839 401..1156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41839.10742.1 ID=prot_H-paniculata_contig41839.10742.1|Name=mRNA_H-paniculata_contig41839.10742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp
SSKSHVHWTIDSGCTGHHLTPQRDLFQNVRQVVRSPIATAGKGELNVEGQ
GDVESLIWAAEGAMRIIFSNVLYVPEASDSILSVERMVSQGMEGYFVGDE
VDIQAAKRAIGKQVKFLRLFSNDCTTPKNNEKRQQMVDTKLLHERLEHVR
DLPTVARQQGIRLSGKLGVCSACEKGKASKQPVKKYREERTLELVHTDIA
GPVDKSFGGCRFAIIFVDDYSRM
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