prot_H-paniculata_contig4183.10740.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4183.10740.1
Unique Nameprot_H-paniculata_contig4183.10740.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length500
Homology
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BLAST of mRNA_H-paniculata_contig4183.10740.1 vs. uniprot
Match: D7FMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA1_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 7.370e-13
Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 0 
Query:  303 APRGGGQG----------TLLSSRSKEAGASYPSGLTSWGSGVSQEPEFNDDAESEDSAESDT--ESTVAAPAVTWGQFMGQRHKEARPPPGPVKILV--APDPPRKASADSDXXXXXXXXXXDDIMSTFGPVSLRPDQDDILFSHKEEELLLMMDR 445
            APR GG G          +L  +R+KE G S+ S  TSWG+  + + + +D+  +E SA SD   ++ V    +TWGQF+ QR +E   P  P K      P PPRK  A  + XXXXXXXX DDIMSTFGPVS+R  ++DILF  ++EE L M DR
Sbjct:  280 APRLGGSGAREARSQSASSLTQARAKETGMSFGSRFTSWGTSRADD-DRSDEGSAESSAGSDRNGDAAVLKQELTWGQFITQRFEE---PASPTKNNTRGGPAPPRKPPAGFNGXXXXXXXXIDDIMSTFGPVSIRTGREDILFGPQDEEPLPMFDR 432
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4183.10740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMA1_ECTSI7.370e-1345.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4183contigH-paniculata_contig4183:4450..13008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4183.10740.1mRNA_H-paniculata_contig4183.10740.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4183 4450..13826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4183.10740.1 ID=prot_H-paniculata_contig4183.10740.1|Name=mRNA_H-paniculata_contig4183.10740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=500bp
MARPILKPRPGFRPKPVAGPVGADNTHFSDSDSSSNDGLLRGGADGSDDS
EPRRPAQGTADDLRSGRRIRRSWGIPSLISKQGSKSNLGIDTGIARAHEL
ISQTTVGSQVSRVVEADPSSRRLSSSGRASPEMQRHSGVGARSNNSSGGG
GSNNTNSSSRGGNLSAAAVQSRLHQPPLADNPTLDSVSSSEGDMTWEDFL
ATTDDGTASGTAGKAGTSASSAAPIGRRRVDSVPSLSSTNNPSSPRNRMP
HSLVPNPTPVNRIKVSAGSGLGLGRLSDSSVSAGATAGVVMRTVAPSSGG
NVAPRGGGQGTLLSSRSKEAGASYPSGLTSWGSGVSQEPEFNDDAESEDS
AESDTESTVAAPAVTWGQFMGQRHKEARPPPGPVKILVAPDPPRKASADS
DDFDDDEDDDIDDIMSTFGPVSLRPDQDDILFSHKEEELLLMMDRSSELG
KGRGPGIDIVAVARASGKAPVPAGAGNIGGADGRGNGNGGGGGGKGVSTG
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