prot_H-paniculata_contig41561.10676.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41561.10676.1
Unique Nameprot_H-paniculata_contig41561.10676.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length244
Homology
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A4S4L116_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L116_9AGAM)

HSP 1 Score: 147 bits (371), Expect = 1.310e-38
Identity = 89/247 (36.03%), Postives = 134/247 (54.25%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPV---EGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSALRSAVR-VMVTVWDLFVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            +SQ  Y+ EVL  +G  +   + TP+   +  V+T  PE   ++     Y+ ++GS+M+   GTRPD+A+ +   ++ S +       +   ++  LC TS  R   R         FVD +WA +V DR+S +G+V K+   AISW S+KQ     SST+AEYV    A KE  ++  L   I   C+  TTLF DN+S + +++    + RTKHIG     +RE +  G L LKYL TGDQ+AD+
Sbjct:  144 LSQERYVEEVLSRFGQQDAHPMVTPMLANQRLVRTEKPEVDIRT-----YQRILGSVMWAMLGTRPDLAFTIGSLSQFSSAPTEEALHALMRMLRYLCRTSDTRLVYRGTQKEELTGFVDADWAGNVNDRRSISGFVFKVADGAISWSSKKQGSTALSSTKAEYVAGTHAAKELVWLWALFAEISLPCKGPTTLFMDNQSAMAIAENPVYHARTKHIGARHHFLRERVEDGELELKYLPTGDQMADV 385          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A8D8D293_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8D293_CULPI)

HSP 1 Score: 147 bits (371), Expect = 3.050e-38
Identity = 90/247 (36.44%), Postives = 133/247 (53.85%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTS----ALRSAVRVMVTVWDLFVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            I+Q S+IR++ K YG DE +    P++      A E ++   N+TEY  +VGSL+Y ST TRPDIA  V   +R+  S   +       V+  L  T+     L ++    ++  + F D +WA D  DRKS +G+V +     ISW SRKQ  V+ S+ EAEYV   EA +E  ++  LL  +G   +  TT+F+DNKS ++       N R+KHI   +  I++    G + L+Y  T D LADI
Sbjct:  158 INQSSFIRKIAKQYGLDESKKSKIPMDTGYYKFA-EKSEVLPNNTEYHSLVGSLLYVSTNTRPDIAASVSILSRKIQSPSQADWTELKRVVRYLVGTADHRLQLGTSEADRMSALEGFCDADWASDTSDRKSNSGFVFRFGEATISWASRKQTCVSTSTMEAEYVALAEAVQEVVWLRRLLAELGEKQQTPTTIFEDNKSCLDFVALERQNRRSKHIDTKFHYIKDAATSGQIVLRYCTTTDMLADI 403          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI)

HSP 1 Score: 141 bits (355), Expect = 3.180e-37
Identity = 99/261 (37.93%), Postives = 138/261 (52.87%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEG--KVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFF-VISVLCLTSALRSAV--------RVMVTVWDLFVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTT-------LFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            ISQ  Y+  +LK +G  + R V TP+E   K+  LA    D       Y+  +G+LMY   G+RPDIA+ V   ++ + ST  + H +A   V   L  TS LR              +TV   + D +WA D  DR+ST+ YV KL G AISWCSRKQQ +  SSTEAEYV    A KE  ++S LL  +        +       +  DN+S + L+K S  + RTKHI +    IR+ +  G L ++Y+ TGDQ+AD+
Sbjct:   10 ISQEQYVETILKRHGMSDCRPVSTPMEANFKLDKLAEAEIDPK----PYQSALGALMYAMLGSRPDIAFAVGTLSKHA-STPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVG-YSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADV 264          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 143 bits (360), Expect = 4.490e-37
Identity = 95/260 (36.54%), Postives = 135/260 (51.92%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSALRSAVRVMVTVWDL-----------------FVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            I+Q  Y  E LK YG +    V  P+    K L+      + + T ++ +VGSL Y  T TRPD+ Y V+  +R  Y   P+                 L +A R++  V                    FVD ++A DV+DRKST+GYV  L G A+SW S+KQ +VT S+TEAE+V A     +  ++  +LG IG+   EGTTLF DN STI LSK    + R+KHI + +  +R+ +   V+ LK+  T DQL+DI
Sbjct:  111 INQQKYAEETLKKYGMEGCNAVKNPIVPGNK-LSRAGGGDAADPTMFKQLVGSLRYL-TATRPDLIYSVNLVSR--YMENPN--------------EQHLLAAKRILRYVQGTCGFGIRYKQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDI 352          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 140 bits (353), Expect = 2.480e-36
Identity = 95/256 (37.11%), Postives = 132/256 (51.56%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPS-------------VHASAFFVISVLCLTSALRSAVRVMVTVWDLFVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            ISQ  Y  E LK YG  +   V  P+    K L    A +  + T Y+ +VGSL Y  T TRPD+ Y V+  +R  Y   P              V  +A F I  LC           +V     +VD ++A D +DRKST+G+     G A+SW S+KQ +VT S+TEAEYV A     +  ++  +L  IGFG  +GT LF DN S I LSK    + R+KHI + +  +RE +  G+++ +Y  T +QLADI
Sbjct:   79 ISQRKYALETLKKYGMQDCNAVRNPMVPGNK-LTKRGAGEEVDPTAYKQLVGSLRYL-TATRPDLIYSVNVVSR--YMENPREEHMMAVKHIMRYVKGTAGFGIQYLC------GGEEKLVG----YVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADI 320          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 140 bits (352), Expect = 7.750e-36
Identity = 83/250 (33.20%), Postives = 133/250 (53.20%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSALRSAVRVMVTVWDL-------FVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            I Q +Y   ++K YG +  + V TPV+   K ++     +  N  EY+  VGSL+Y S+ TRPDI + V+  A+ S +   + H +A     V  +   L+  V   +   +        F D +WA D+ DRKST+GY  ++NG A+SW S+KQ  V  S+ EAEYV    A +E  ++ +LL  +     +  T+++DN+S I +SK    + R+KHI + +  +R+ +    L + Y  TG  LAD+
Sbjct:  117 IGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFS-ANFTNEHWTA-----VKRIFRYLKKTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADL 360          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 140 bits (354), Expect = 1.840e-34
Identity = 84/250 (33.60%), Postives = 133/250 (53.20%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSALRSAVRVMVTVWDL-------FVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            I Q +Y   ++K YG +  + V TPV+   K ++     +  N  EY+  VGSL+Y S+ TRPDI + V+  A+ S +   + H +A     V  +   L+  V   +   +        F D +WA D+ DRKST+GY  ++NG A+SW S+KQ  V  S+ EAEYV    A +E  ++ +LL  +     E  T+++DN+S I +SK    + R+KHI + +  +R+ +    L + Y  TG  LAD+
Sbjct: 1006 IGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPT-NEHWTA-----VKRIFRYLKGTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADL 1249          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 140 bits (354), Expect = 1.870e-34
Identity = 90/245 (36.73%), Postives = 129/245 (52.65%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSALRSAVRVMVTVWDL--FVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            +SQ  YI +VL+ +GF + R + TPV    K     +A+   ++ +Y+  VGSLMY   GTRPDIAY V   ++ S +        A      L  T+  +          +L  +VD +WA D  DR+S +GYV  L G AISW S+KQQ V  SSTEAEY+ A  A KE  ++  LL  +       T L  DN+  I L+K    +  TKHI +    +R+ +  G +A +Y+ T DQ+AD+
Sbjct: 1143 LSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEI--DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADV 1385          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 140 bits (353), Expect = 1.930e-34
Identity = 84/257 (32.68%), Postives = 134/257 (52.14%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSALRSAVRVMVTVWDL--------------FVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            + Q +Y   VLK +G +  + V TPV+   K +      +  +  +++  VGSL+Y ST TRPDIAY V+  AR  +   P+               +A++  +R +    +L              F D +WA D  DRKS +GY+ +++G A+SW S+KQ  V  S+ EAEY+    A +E  ++ +L+  +       T +F+DN+S I ++K S  + R KHI + +  IRE I GGV+ L+Y  T D +AD+
Sbjct:  484 MGQATYAENVLKKFGMENSKPVSTPVDINTKLVKHSDDSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVAR--FCAKPTKQH-----------WTAVKRIMRYLKGTLNLGLLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADM 727          
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 134 bits (336), Expect = 3.610e-34
Identity = 82/246 (33.33%), Postives = 132/246 (53.66%), Query Frame = 0
Query:    1 ISQGSYIREVLKIYGFDERRGVPTPVE-GKVKTLAPESADKSGNSTEYRGMVGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSALRSAVRVMVTVWDL--FVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQLVTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINLSKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI 243
            ISQ +Y++ +LK +G ++ + V TP+E GK     P+  + + N+ EY+ ++G L Y +T TRPD+A  V   ++            A  V+  +  T           T   L  + D +WA D++ R+ST+GYV ++NG  +SWCS++Q  VT S+TEAEYV    A +E  ++  LL  IG    + + + +DN+  I LSK    + RTKHI + +  +RE +    + + Y  T   LAD+
Sbjct:   40 ISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPT-NTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADV 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41561.10676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4L116_9AGAM1.310e-3836.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8D8D293_CULPI3.050e-3836.44Copia protein n=1 Tax=Culex pipiens TaxID=7175 Rep... [more]
A0A060SU91_PYCCI3.180e-3737.93Uncharacterized protein n=2 Tax=Pycnoporus cinnaba... [more]
A0A6D2JBX5_9BRAS4.490e-3736.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0006A737CF2.480e-3637.11uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A7D9M6E1_PARCT7.750e-3633.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HEL0_PARCT1.840e-3433.60Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A4Y9ZJA2_9AGAM1.870e-3436.73Integrase catalytic domain-containing protein n=1 ... [more]
A0A498M2F0_LABRO1.930e-3432.68Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9D5L2_PARCT3.610e-3433.33Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 115..225
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 115..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41561contigH-paniculata_contig41561:634..1440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41561.10676.1mRNA_H-paniculata_contig41561.10676.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41561 634..1440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41561.10676.1 ID=prot_H-paniculata_contig41561.10676.1|Name=mRNA_H-paniculata_contig41561.10676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
ISQGSYIREVLKIYGFDERRGVPTPVEGKVKTLAPESADKSGNSTEYRGM
VGSLMYTSTGTRPDIAYMVHQAARRSYSTVPSVHASAFFVISVLCLTSAL
RSAVRVMVTVWDLFVDGNWAEDVEDRKSTAGYVLKLNGCAISWCSRKQQL
VTWSSTEAEYVVAEEAGKETEYISELLGSIGFGCREGTTLFKDNKSTINL
SKGSGANCRTKHIGMCWREIREWIRGGVLALKYLQTGDQLADI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like