prot_H-paniculata_contig4153.10672.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4153.10672.1
Unique Nameprot_H-paniculata_contig4153.10672.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: D7FKE1_ECTSI (AP-1 complex subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE1_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 2.360e-57
Identity = 99/117 (84.62%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKELQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFW-DQFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            MLEMIAVAGD VAGAVWHRIIQIVTNHK+LQAYAA+RLF TL+S RAHETAV++GGYILGEFGYFIAEQ      DQFHVLHQHF + GPAAKALLLSTYAKLANLYPECR+LVTPV
Sbjct:  452 MLEMIAVAGDSVAGAVWHRIIQIVTNHKDLQAYAAERLFATLQSPRAHETAVNIGGYILGEFGYFIAEQDKMSGQDQFHVLHQHFMEVGPAAKALLLSTYAKLANLYPECRELVTPV 568          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: A0A6H5L7E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E0_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 2.910e-56
Identity = 100/117 (85.47%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKELQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFW-DQFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            MLEMIAVAGD VAGAVWHRIIQIVTNHK+LQAYAA+RLF TL+S RAHETAV+VGGYILGEFGYFIAEQ      DQFHVLHQHF + GPAAKALLLSTYAKLANLYPECR+LVTPV
Sbjct:  456 MLEMIAVAGDSVAGAVWHRIIQIVTNHKDLQAYAAERLFATLQSPRAHETAVNVGGYILGEFGYFIAEQDEMSGQDQFHVLHQHFMEVGPAAKALLLSTYAKLANLYPECRELVTPV 572          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: A0A836C8G3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G3_9STRA)

HSP 1 Score: 171 bits (434), Expect = 8.870e-48
Identity = 85/117 (72.65%), Postives = 98/117 (83.76%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKELQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFWD-QFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            +L+MI++AGD V   VWHRI+QIVTN+K+LQAYAA+RLF  LR+KR H+TAV+VGGYILGEFG+FIAEQ     D QF  LHQHFADA P  +ALLLSTYAKLANLYPECR LVTPV
Sbjct:  478 VLQMISIAGDHVGAEVWHRIVQIVTNNKDLQAYAAERLFGALRAKRVHQTAVNVGGYILGEFGFFIAEQEGMGGDAQFAALHQHFADASPGTRALLLSTYAKLANLYPECRALVTPV 594          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: A0A7S1BCA8_9STRA (AP-2 complex subunit alpha n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCA8_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.360e-36
Identity = 72/119 (60.50%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHK--ELQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFWD-QFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            +L++I+++GD V+ ++WHR++QIVTN+   +LQ+YAA  LFVT+ SKRAHETAV V  YILGEFG+ IAEQ     + QF VLHQH+   G   KA+L+STYAKLANLY ECR LVTPV
Sbjct:  446 ILKLISISGDHVSDSIWHRVVQIVTNNPAGDLQSYAAATLFVTVASKRAHETAVKVSAYILGEFGFLIAEQPGMSGEEQFGVLHQHWPVVGRMTKAILISTYAKLANLYEECRPLVTPV 564          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: W7TFV9_9STRA (AP-2 complex subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFV9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 8.830e-36
Identity = 72/116 (62.07%), Postives = 84/116 (72.41%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKELQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFWD-QFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTP 115
            +L++I +AGD+VA  VWHRIIQIVT HK+LQAYAA+  F  L ++  HE AV VGGY+LGEFGY IAEQ     + Q  VL +HFA   P  KALLLSTYAKL NLYPE R LV P
Sbjct:  504 VLQLIHLAGDYVADDVWHRIIQIVTGHKDLQAYAAENCFRALEARNVHEAAVLVGGYVLGEFGYLIAEQPGRGGEVQVRVLQKHFAGTTPRTKALLLSTYAKLENLYPEVRPLVLP 619          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: K0R582_THAOC (AP-2 complex subunit alpha n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R582_THAOC)

HSP 1 Score: 138 bits (348), Expect = 1.200e-35
Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKE--LQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFWD-QFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            +L++I++AGD+V+ ++WHR++QIVTNH +  LQ YAA  LF+ +   R HET V V  Y+LGEFG+ IAE+A    + QFHVLHQH+ + G + K++L+STYAKLANLY ECR LV PV
Sbjct:  469 ILKLISIAGDYVSDSIWHRVVQIVTNHPQGDLQGYAAATLFLAVSPHRCHETTVCVAAYVLGEFGFLIAERAGMSGEEQFHVLHQHWFNVGTSTKSILISTYAKLANLYEECRPLVAPV 587          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: A0A1Z5K119_FISSO (AP-2 complex subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K119_FISSO)

HSP 1 Score: 132 bits (332), Expect = 1.730e-33
Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKE--LQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFWD-QFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            +L++I+++GD V+ A+WHR++QIVTNH +  LQAY A  L V    +R HET V V  YILGEFG+ IAE+     + QF +LHQH+  A PA +A+L+S+YAKLANLY ECR LV PV
Sbjct:  524 ILKLISISGDHVSDAIWHRVVQIVTNHPQGDLQAYTAATLLVAASPRRCHETTVRVAAYILGEFGFLIAERPGMSGEEQFRILHQHWTTADPATRAILVSSYAKLANLYEECRPLVAPV 642          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: B7FY75_PHATC (AP-2 complex subunit alpha n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY75_PHATC)

HSP 1 Score: 131 bits (329), Expect = 4.380e-33
Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKE--LQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFW-DQFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            +L++I+++GD V+ A+WHR++QIVTNH +  LQAY A  L V +  +R HETAV V  YILGEFG+ IAE+      DQF +LHQH+A +    + +L+STYAKLANLY ECR LV PV
Sbjct:  502 ILKLISISGDNVSDAIWHRVVQIVTNHPQGDLQAYTAATLLVAVSPRRCHETAVRVASYILGEFGFLIAERPGMSGEDQFRILHQHWATSDHVTRGILISTYAKLANLYEECRPLVAPV 620          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: A0A7S2XJT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJT4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.410e-33
Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKE--LQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFW-DQFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            ++++I ++GD V+ A+WHR++QIVTNH +  LQAYAA  L V    +R HETAV V  YILGEFG+ IAE++     DQF VLHQH+A A    +++L+S YAKL+NLY ECR LV PV
Sbjct:  482 IIKLITISGDNVSDAIWHRVVQIVTNHPQGDLQAYAASTLLVAATPRRCHETAVRVAAYILGEFGFLIAERSGMSGEDQFRVLHQHWATADMQTRSILISAYAKLSNLYEECRPLVAPV 600          
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Match: A0A7S2PNC4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PNC4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.950e-33
Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 MLEMIAVAGDFVAGAVWHRIIQIVTNHKE--LQAYAADRLFVTLRSKRAHETAVSVGGYILGEFGYFIAEQASCFWD-QFHVLHQHFADAGPAAKALLLSTYAKLANLYPECRDLVTPV 116
            +L++I+++GD V+ ++WHR++QIVTNH +  LQAYAA  L V    +R HETA+ V  Y+LGEFG+ IAE+     D QF VLHQH+       ++LLLSTYAKLANLY ECR LV P+
Sbjct:  175 ILKLISISGDHVSDSIWHRVVQIVTNHPQGDLQAYAAATLLVAASPRRCHETAIRVAAYVLGEFGFLIAERPGMSGDEQFRVLHQHWPTVNKQTRSLLLSTYAKLANLYEECRPLVAPI 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4153.10672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKE1_ECTSI2.360e-5784.62AP-1 complex subunit gamma n=1 Tax=Ectocarpus sili... [more]
A0A6H5L7E0_9PHAE2.910e-5685.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8G3_9STRA8.870e-4872.65AP-1 complex subunit gamma n=1 Tax=Tribonema minus... [more]
A0A7S1BCA8_9STRA1.360e-3660.50AP-2 complex subunit alpha n=1 Tax=Corethron hystr... [more]
W7TFV9_9STRA8.830e-3662.07AP-2 complex subunit alpha n=2 Tax=Monodopsidaceae... [more]
K0R582_THAOC1.200e-3555.46AP-2 complex subunit alpha n=1 Tax=Thalassiosira o... [more]
A0A1Z5K119_FISSO1.730e-3354.62AP-2 complex subunit alpha n=2 Tax=Fistulifera sol... [more]
B7FY75_PHATC4.380e-3354.62AP-2 complex subunit alpha n=3 Tax=Phaeodactylum t... [more]
A0A7S2XJT4_9STRA4.410e-3354.62Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2PNC4_9STRA4.950e-3353.78Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..116
e-value: 1.8E-25
score: 91.3
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 2..107
e-value: 3.0E-13
score: 49.2
NoneNo IPR availablePANTHERPTHR22780:SF4AP-2 COMPLEX SUBUNIT ALPHAcoord: 1..113
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 1..113
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4153contigH-paniculata_contig4153:223..1304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4153.10672.1mRNA_H-paniculata_contig4153.10672.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4153 202..1304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4153.10672.1 ID=prot_H-paniculata_contig4153.10672.1|Name=mRNA_H-paniculata_contig4153.10672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MLEMIAVAGDFVAGAVWHRIIQIVTNHKELQAYAADRLFVTLRSKRAHET
AVSVGGYILGEFGYFIAEQASCFWDQFHVLHQHFADAGPAAKALLLSTYA
KLANLYPECRDLVTPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR002553Clathrin/coatomer_adapt-like_N
IPR016024ARM-type_fold