prot_H-paniculata_contig4150.10666.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4150.10666.1
Unique Nameprot_H-paniculata_contig4150.10666.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length282
Homology
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: D7FJJ9_ECTSI (Ribosomal RNA-processing protein 43 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ9_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 8.590e-150
Identity = 206/272 (75.74%), Postives = 241/272 (88.60%), Query Frame = 0
Query:    1 MEVEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPATRQIGDELFITKDAPTPLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAAAEV 272
            MEVEAFQRLDPENFYRRF+KNGVRPDGRELRAVRPISVDV VLS E VQASALVGLGSTKVLAGI+L++G P+E+TP+ GMLDVE+KLTPLSS+KF++GRPSEQAH +  F+K SIVESGAL+L DL+++ G  AWKLC+DIVCLSFDGN+ADA L+AAM ALMRL+LP TR+I DE+F+T+D PT L +  VPVPLTCGVFDGII+ DPSLLEE+L+TTHVTVVST+ G+VCGVHKPGGSC SG+QLN CLQLCQQHA+ L +TL AA  +
Sbjct:    1 MEVEAFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAHVLSTFVKNSIVESGALVLTDLAIDDGAFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTEDTPTQLVVREVPVPLTCGVFDGIIIADPSLLEEELLTTHVTVVSTSEGKVCGVHKPGGSCASGKQLNECLQLCQQHAKQLTQTLAAAVRI 272          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: A0A836C8N5_9STRA (Ribosomal RNA-processing protein 43 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N5_9STRA)

HSP 1 Score: 258 bits (658), Expect = 4.930e-82
Identity = 135/282 (47.87%), Postives = 183/282 (64.89%), Query Frame = 0
Query:    1 MEVEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPATRQIGD-ELFITKDAPTPLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVST-----------ATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAAA 270
            MEVEAFQ+LDP+ FYR+F+  GVRPDGR L+ VR ++V   VL+  HV ASALV LG TKV+ GITL++GQP+++ P  G ++V + LTPL S+ F+ GRPSEQA A+   I+  +  S     EDL +E    AW+LCID+ CLS++GN ADA L++  A L+RL+LP T    D E+ + +   TPL + HVP+PLT GVF+G +V DPSLLEEDL+   +TVV +              +VC VHK GG+C +   L   L L + HA+ ++  L  AA
Sbjct:    1 MEVEAFQKLDPQTFYRKFLSEGVRPDGRGLQEVRDVAVSCGVLTAPHVAASALVTLGDTKVVTGITLQVGQPSQAEPGCGDVEVSVHLTPLCSSMFSVGRPSEQAQALEALIRDVLTASRPFRREDLLIEARRFAWRLCIDMYCLSYEGNAADAALLSVAACLLRLRLPPTVITPDGEVLVAEGEGTPLPVSHVPLPLTFGVFEGALVADPSLLEEDLVAAALTVVQSLDEGKGGSGGGGAARVCAVHKAGGACVAPALLARALALGRSHAQRVLPVLRGAA 282          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: M4BB92_HYAAE (Ribosomal RNA-processing protein 43 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BB92_HYAAE)

HSP 1 Score: 189 bits (479), Expect = 2.960e-55
Identity = 102/271 (37.64%), Postives = 159/271 (58.67%), Query Frame = 0
Query:    3 VEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASA-LVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPAT--RQIGDELFITKDAPT-PLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAA 269
             + F+RL P  + R+ +++ VR DGR + A R   +   V+   H  AS+ LV LG T VL  I L +G PA +TP  G + +++ LTPL S +F+ GRPSE+A ++G+ +   ++ S  + +EDLS+  G   WKL +D+ C++ DGNV DA L + MAAL  LKLPAT   +  + + I  D  T PL +       +  V D  ++ DP+  EEDL +  +++  T  GQ+CGVHK GG+  +   +  C+Q+ +Q+A +L K + A+
Sbjct:   13 AQTFKRLFPAEYARKCLQSNVRVDGRSIEATRTAQLQTNVV---HTAASSSLVKLGKTSVLTAIKLAVGTPAVATPDQGEIAIQVHLTPLCSNRFSVGRPSEEAQSIGSQLTRIVLGSRVVEMEDLSIAKGQSTWKLMVDVFCVNHDGNVLDAALASVMAALQTLKLPATSINEADNVVSIVPDGDTMPLCVRFGAYATSFAVVDSTVLIDPTSEEEDLASAVLSIAFTTEGQICGVHKAGGTIVAPDVMQHCMQIAKQNATVLAKLVDAS 280          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: A0A2D4CFL6_PYTIN (Ribosomal RNA-processing protein 43 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFL6_PYTIN)

HSP 1 Score: 188 bits (477), Expect = 6.820e-55
Identity = 103/272 (37.87%), Postives = 157/272 (57.72%), Query Frame = 0
Query:    2 EVEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPATRQIGDELFITKDAP----TPLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAA 269
            +   +++L P  F R+ I+N VRPDGR L+A R + +    +  E   +S+LV +G+T V+  I L +G PA +TP  G + ++  LTPL ST+F+ GRPSE+A ++G+ +   +  S  + +  LS+E G  AWKL +D+ C+  DGNV DA L++ MAAL  L+LPA   I +   +    P    TPLK+ H     T    +G IV DP+  EE L ++  ++      Q+ GVHKPGG+  + Q L++C+Q  +  A LL  T+  A
Sbjct:    9 DAAMYRKLFPREFVRKCIENDVRPDGRRLQAARAVHIQTGAI--ETAASSSLVKIGNTTVMTAIKLAVGTPAVATPDQGEIAIQAHLTPLCSTRFSLGRPSEEAQSIGSQLMRIVTGSRVVEMSTLSIERGKSAWKLIVDVYCIDHDGNVHDAALMSVMAALKTLRLPAV-VISESDHVVSLQPDGESTPLKVQHSVYSTTFADLEGRIVVDPTSEEESLASSVFSITYNTQEQLAGVHKPGGALLAPQTLHSCMQAAKTRASLLHSTVERA 277          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: A0A6U1QCI5_9STRA (Ribosomal RNA-processing protein 43 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QCI5_9STRA)

HSP 1 Score: 187 bits (474), Expect = 3.570e-54
Identity = 113/302 (37.42%), Postives = 156/302 (51.66%), Query Frame = 0
Query:    1 MEVEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPATRQIGDELFITKDAPT------PLKIHHVPVPLTCGVFDG---------------------------IIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAA 269
            MEVEAFQRL PE FY+RF+  G+RPDGR+   +R +++D+ VL   H   SA+V LG+TK +A ++L+IGQPA  TP  G + V + L PL    F A +    A  + +F+   +   G +  E L + PG  AW++CIDI+CL+  GN+ D  L AA++AL   +LP            +  P        L++ H+PV LT GVF                             ++V DPSLLEE L+ + VTVV    GQ+  V KPGG    G  LN CL LC    ++    L  A
Sbjct:    1 MEVEAFQRLAPEGFYKRFVSKGIRPDGRKFHEIRKMNIDLGVLPLTH--GSAMVRLGATKAVAAVSLQIGQPATLTPNCGEISVGVALRPLCHPNFPASQHCRTAQQMESFLTRLLNTCGIVSPESLCITPGAAAWRVCIDILCLNHQGNLIDVCLAAAVSALRCTRLPQLEAPDHPGGAYQIHPVGAGESRALELVHIPVALTLGVFPALSHHSGTTEHGTGDRDTPPGGGGGKMPVLVADPSLLEEGLMESVVTVVRNERGQINAVFKPGGCKLPGDCLNVCLALCTSQHKIFSSLLAEA 300          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: A0A2P4XYR1_9STRA (Ribosomal RNA-processing protein 43 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XYR1_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.030e-52
Identity = 96/266 (36.09%), Postives = 152/266 (57.14%), Query Frame = 0
Query:    3 VEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPATRQIGDELFITKDAP----TPLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVK 264
             E ++++ P  + R+ + N VRPD R + A R + +   V+  +   +S+LV LG T VL  I L +G PA +TP  G + +++ L+PL S +F  GRPSE+A ++G+ +   IV S  + +E LS+  G  AWKL +D+ C+  DGNV DA L + MAAL  LKLPAT  + +   +    P    TPL++ H     +  + D +++ DP+  EED  T   ++  +  GQ+CGVHK GGS  +   +  C+ + ++ AE L +
Sbjct:   12 AEMYRKVFPAEYMRKCLANKVRPDSRTIEASRAVQLQTNVV--QTAASSSLVKLGKTSVLTAIKLAVGTPAVATPDQGEIAIQVHLSPLCSNRFTVGRPSEEAQSIGSQLTRIIVGSRVVEMESLSIVKGQSAWKLMVDVYCVDHDGNVLDAALTSIMAALRTLKLPAT-SVNEADNVVSIVPGGDATPLRVEHGAYATSFAIVDDVVLIDPTSDEEDQATAVFSLSYSTNGQLCGVHKAGGSIVAPSVMQQCMHIAKRKAETLAE 274          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: G5AAV8_PHYSP (Ribosomal RNA-processing protein 43 n=3 Tax=Phytophthora TaxID=4783 RepID=G5AAV8_PHYSP)

HSP 1 Score: 181 bits (458), Expect = 4.400e-52
Identity = 96/270 (35.56%), Postives = 158/270 (58.52%), Query Frame = 0
Query:    3 VEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPAT--RQIGDELFITKDAP-TPLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAA 269
             + +++L P  + R+ + + VRPD R + A R + +  +V+  +   +S+LV LG T VL  I L +G PA +TP  G + V++ L+PL S +F+ GRPSE++ ++ + +   IV S  + +E LS+  G  AWKL +D+ C+  DGNV DA L + MAAL  LKLPAT   +  + + I  D   TPL++ H     +  V +  ++ DP+  EEDL +   ++  +  GQ+CGVHK GG+  +   +  C+Q+ +++ E L K + A+
Sbjct:   15 ADMYKKLFPAEYVRKCLASKVRPDSRTIEAARAVQLQTDVV--QTAASSSLVKLGKTSVLTAIKLAVGTPAVATPDQGEIAVQVHLSPLCSNRFSVGRPSEESQSISSQLTRIIVGSRVVEMESLSIVKGQSAWKLMVDVYCVDHDGNVLDAALTSIMAALKTLKLPATSVNEADNVVSIVPDEDATPLRVEHCAYATSFAVVEDSVLIDPTSDEEDLASAVFSLSYSTNGQLCGVHKAGGTIVAPHVMQQCMQVAKRNTEALAKLVDAS 282          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: A0A8K1CFV5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFV5_PYTOL)

HSP 1 Score: 179 bits (455), Expect = 1.430e-51
Identity = 96/272 (35.29%), Postives = 154/272 (56.62%), Query Frame = 0
Query:    2 EVEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPATRQIGDELFITKDAPT----PLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAA 269
            + + +++L P  +  + I+N VRPD R L A RP+ +   V+  +   +S+LV +G+T V+  + L +G PA +TP  G + +++ LTPL ST+F  GRPSE+  ++G+ +   I  S  + + DLS+E G  AWKL +D+  +  DGN+ DA L++ +AAL  L+LPA   I +   +    P     PLKI H     T G+ +  ++ DP+  EE L +   T+   +  Q+ GVHKPGGS    Q L+ C+ + ++ A LL   +  A
Sbjct:   15 DSDVYRKLFPREYVNKCIENNVRPDSRLLEATRPVHIQTNVV--KTAASSSLVKIGNTSVMTAVKLTVGTPAVATPDQGEIAIQVHLTPLCSTRFNLGRPSEETQSIGSQLTRIITGSRVVEMSDLSIERGKSAWKLMVDVYGVDHDGNIHDAALLSVIAALKTLQLPAVT-INESDHVVSIQPDGELMPLKIQHTVYSTTFGILNNRVIVDPTNEEELLASALFTITYNSNAQLAGVHKPGGSILEPQTLHHCMSIAKKRAVLLAAAIDKA 283          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: A0A3M6VDK4_9STRA (Ribosomal RNA-processing protein 43 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDK4_9STRA)

HSP 1 Score: 177 bits (450), Expect = 5.540e-51
Identity = 97/269 (36.06%), Postives = 153/269 (56.88%), Query Frame = 0
Query:    4 EAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPATR-QIGDEL--FITKDAPTPLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAA 269
            + FQ+L P  +  + + N VR D R + A+R + +   V+  E   +S+LV LG T VL  I L +G PA +TP  G + +++ L+PL S +F  GRPSE+A +V + +    + S  + +E+LS+  G  AWKL +D+ C+  DGNV DA L + MAAL  LKLP T     D +   +  +  TPL++ H     +  V D  ++ DP+  EEDL +   +   +  GQ+CGVHK GGS  +   ++ C+Q  +++ ELL K + ++
Sbjct:    8 DVFQKLFPVEYTHKCLMNKVRTDARTMDALRAVQLQTNVV--ETAASSSLVKLGKTSVLTAIKLAVGTPAVTTPDQGEIAIQVHLSPLCSNRFTVGRPSEEAQSVSSQLTRIFMGSRVVEMENLSIVNGQSAWKLMVDVYCVDHDGNVLDAALTSIMAALKTLKLPVTSVNEADNVVSIVPNEDATPLRVEHCAYATSFAVVDDTVLIDPTSDEEDLASAVFSFSYSTNGQLCGVHKAGGSIVAPNVMHQCMQKAKRNMELLAKLVDSS 274          
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Match: A0A7J7AS83_9COLE (Ribosomal RNA-processing protein 43 n=1 Tax=Lamprigera yunnana TaxID=370605 RepID=A0A7J7AS83_9COLE)

HSP 1 Score: 177 bits (449), Expect = 7.390e-51
Identity = 97/269 (36.06%), Postives = 152/269 (56.51%), Query Frame = 0
Query:    3 VEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQASALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGRPSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGNVADAGLVAAMAALMRLKLPA-TRQIG-DELFITKDAPTPLKIHHVPVPLTCGVFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNTCLQLCQQHAELLVKTLHAA 269
             + F+ L P  FYR ++   +RPDGR L   RP+ ++   +S      SAL+ +G T ++ GI  E+ QP    P YG L   + L PL S+KF  G PS+ A    +FI   ++ SG + L+DL +      W L ID++CL +DG + DA L+A + AL  +KLP+ T  +  D   +  +    + +H++PV  T  +F+  I+TDP+  EEDL +  +TVV     ++C +HKPGGS  S ++L  C+Q   +HA+LL+  ++ A
Sbjct:    2 AKQFKSLHPTKFYRDYLNQNIRPDGRLLSKFRPVIINTGSISTGD--GSALIRIGKTTIVCGIKAELAQPKVEKPYYGYLVCNVNLPPLCSSKFRPGPPSDLAQITTSFIADLLMNSGCIDLKDLCIVQEKLVWCLYIDLICLDYDGCLIDACLLALLTALKTVKLPSVTYDVAIDSKMVNDEEKKSITVHNIPVSTTYAIFEDKIITDPTAEEEDLSSGLITVV-VKDKELCSIHKPGGSPISEEKLFDCIQETIKHADLLITLVNTA 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4150.10666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJJ9_ECTSI8.590e-15075.74Ribosomal RNA-processing protein 43 n=2 Tax=Ectoca... [more]
A0A836C8N5_9STRA4.930e-8247.87Ribosomal RNA-processing protein 43 n=1 Tax=Tribon... [more]
M4BB92_HYAAE2.960e-5537.64Ribosomal RNA-processing protein 43 n=1 Tax=Hyalop... [more]
A0A2D4CFL6_PYTIN6.820e-5537.87Ribosomal RNA-processing protein 43 n=2 Tax=Pythiu... [more]
A0A6U1QCI5_9STRA3.570e-5437.42Ribosomal RNA-processing protein 43 n=1 Tax=Fibroc... [more]
A0A2P4XYR1_9STRA2.030e-5236.09Ribosomal RNA-processing protein 43 n=1 Tax=Phytop... [more]
G5AAV8_PHYSP4.400e-5235.56Ribosomal RNA-processing protein 43 n=3 Tax=Phytop... [more]
A0A8K1CFV5_PYTOL1.430e-5135.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VDK4_9STRA5.540e-5136.06Ribosomal RNA-processing protein 43 n=2 Tax=Perono... [more]
A0A7J7AS83_9COLE7.390e-5136.06Ribosomal RNA-processing protein 43 n=1 Tax=Lampri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 33..169
e-value: 7.9E-21
score: 74.9
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 192..254
e-value: 1.6E-8
score: 34.5
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 2..274
e-value: 2.8E-73
score: 248.7
IPR033196Exosome complex component Rrp43PANTHERPTHR11097:SF9EXOSOME COMPLEX COMPONENT RRP43coord: 1..268
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 1..268
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 4..216
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 188..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4150contigH-paniculata_contig4150:8162..12320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4150.10666.1mRNA_H-paniculata_contig4150.10666.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4150 7651..12353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4150.10666.1 ID=prot_H-paniculata_contig4150.10666.1|Name=mRNA_H-paniculata_contig4150.10666.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
MEVEAFQRLDPENFYRRFIKNGVRPDGRELRAVRPISVDVEVLSPEHVQA
SALVGLGSTKVLAGITLEIGQPAESTPLYGMLDVEIKLTPLSSTKFAAGR
PSEQAHAVGNFIKTSIVESGALLLEDLSLEPGIHAWKLCIDIVCLSFDGN
VADAGLVAAMAALMRLKLPATRQIGDELFITKDAPTPLKIHHVPVPLTCG
VFDGIIVTDPSLLEEDLITTHVTVVSTATGQVCGVHKPGGSCTSGQQLNT
CLQLCQQHAELLVKTLHAAAEVHKGEGKCNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001247ExoRNase_PH_dom1
IPR015847ExoRNase_PH_dom2
IPR027408PNPase/RNase_PH_dom_sf
IPR033196Rrp43
IPR020568Ribosomal_S5_D2-typ_fold
IPR036345ExoRNase_PH_dom2_sf