prot_H-paniculata_contig4145.10657.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4145.10657.1
Unique Nameprot_H-paniculata_contig4145.10657.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length229
Homology
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: D7FKH7_ECTSI (40S ribosomal protein S3a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH7_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 2.410e-129
Identity = 186/197 (94.42%), Postives = 193/197 (97.97%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMEREDE 218
            G +IASEGLKGRVFEFSLGDLN DEDLGYRK+KLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIE QVDVRTTDGYLLRI+CIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIM+EEA+KCDL+ELV KFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTED+GMEMEREDE
Sbjct:   52 GTKIASEGLKGRVFEFSLGDLNADEDLGYRKVKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEGQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMSEEASKCDLRELVLKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDIGMEMEREDE 248          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: A0A7S2Y1J4_9STRA (40S ribosomal protein S3a n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1J4_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.400e-97
Identity = 148/194 (76.29%), Postives = 168/194 (86.60%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER 215
            G +IASEGL+GRVFEFSL DLN+DE+  YRKIKLC E+VQGTS LTNFHGMDLTRDKLCSLIKKWQTLIEA+VDV+TTDGY +R+ CIGFTK+  NQIK+T YAQASQ++A+RKKM DIMTEEA KCDLKELV KFIPE+IS EI KA Q I+P+QNV+IRKVK LKKP+FDL KLMEMHGD   EDVG  + R
Sbjct:   78 GTKIASEGLQGRVFEFSLADLNHDEEQAYRKIKLCVEEVQGTSCLTNFHGMDLTRDKLCSLIKKWQTLIEARVDVKTTDGYFMRLFCIGFTKRMPNQIKKTAYAQASQVKAIRKKMVDIMTEEAVKCDLKELVAKFIPESISTEIEKACQGIFPLQNVFIRKVKMLKKPRFDLIKLMEMHGDGG-EDVGAGVSR 270          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: A0A835Z1K4_9STRA (40S ribosomal protein S3a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K4_9STRA)

HSP 1 Score: 289 bits (739), Expect = 1.190e-95
Identity = 143/194 (73.71%), Postives = 163/194 (84.02%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER 215
            G +IASEGLKGRVFE SLGDLNNDE+ G+RKIKLCCEDVQGT+ LT FHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGY LR+ CIGFTKK D Q+K TCYA+A+Q+RA+R+KM +IMT+E +KCDLKELVQKF+ + +S  I KA + I P+QNV IRK K LKKPKFDLTKLMEMH    TED G  + R
Sbjct:   53 GTKIASEGLKGRVFEVSLGDLNNDEEHGFRKIKLCCEDVQGTNCLTTFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYYLRVFCIGFTKKTDGQVKATCYAKAAQVRAIRRKMTEIMTDECSKCDLKELVQKFVLDTVSERITKAARGIVPLQNVLIRKCKVLKKPKFDLTKLMEMH----TEDAGAAVAR 242          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: A0A7S2W4V3_9STRA (40S ribosomal protein S3a n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2W4V3_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.990e-91
Identity = 140/196 (71.43%), Postives = 160/196 (81.63%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMERED 217
            G +IASE LK RVFE SL DLN++ +L YRKI+LCC+DVQG  VLTNFHGMD+TRDKLCSLIKKWQTLIEA+VDVRTTDGY LR+ CIGFT+K  NQIK+T YAQA Q+R +RKKM DIMT E  KCDLKELV KF+ E I  EI KA + IYP+QN YIRKVK LKKPKFDL KLME+H D T  DVG +++RED
Sbjct:   51 GTKIASETLKNRVFEVSLADLNDNAELAYRKIRLCCDDVQGDKVLTNFHGMDMTRDKLCSLIKKWQTLIEARVDVRTTDGYTLRLFCIGFTQKNKNQIKKTWYAQAGQVRQIRKKMVDIMTAECVKCDLKELVAKFVAETIGKEIEKAAEGIYPIQNCYIRKVKLLKKPKFDLVKLMELHAD-TGNDVGAKVDRED 245          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: A0A812NHF5_SYMMI (40S ribosomal protein S3a n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHF5_SYMMI)

HSP 1 Score: 276 bits (705), Expect = 1.730e-90
Identity = 145/198 (73.23%), Postives = 165/198 (83.33%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNN-DEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQ-IKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKF--IPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER 215
            G +IASEGLKGRVFE SL DLN  DE  GYRKIKL CEDV G  VLTNFHGMD+TRDKLCSLI+KWQTLIEA VDVRTTDGY+LR+ CIGFTKKQ NQ  K TCYAQ+ Q+RA+R+KM DIMTEEA+KCDLKELVQKF  +PE+I  EI KA QSI+P+QNV IRKVK L+KPKFDL KLME+HGD+  ED G  +++
Sbjct:   49 GTKIASEGLKGRVFEVSLADLNGGDESQGYRKIKLVCEDVNGYEVLTNFHGMDITRDKLCSLIRKWQTLIEAFVDVRTTDGYVLRMFCIGFTKKQGNQQAKSTCYAQSGQVRAIRRKMFDIMTEEASKCDLKELVQKFCSMPESIGHEIEKACQSIFPLQNVCIRKVKVLRKPKFDLVKLMELHGDSG-EDTGAALDK 245          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: A0A7S1TRR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRR2_9STRA)

HSP 1 Score: 273 bits (697), Expect = 3.040e-89
Identity = 129/185 (69.73%), Postives = 158/185 (85.41%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTT 206
            G +IAS+ LKGRVFE +L DLN DED  YRKI+L CEDVQG +VLTNFHGMD+TRDK+CS+I+KWQTLIEA+ DVRTTDGY+LR+ CIGFTKK  +Q+K+ CYAQ+SQI+A+R++M + MTEEA+KCDL+ELV KFIPE I  +I KA Q+IYP+QNV+IRKVK LKKPKFD+ K ME+HGD  T
Sbjct:   70 GTKIASDALKGRVFEVNLADLNKDEDRAYRKIRLVCEDVQGDNVLTNFHGMDMTRDKICSVIRKWQTLIEARCDVRTTDGYILRMFCIGFTKKSQDQLKKACYAQSSQIKAIRRRMVERMTEEASKCDLRELVLKFIPEVIGEDIEKACQNIYPLQNVFIRKVKVLKKPKFDIVKFMELHGDMAT 254          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: RS3A_ORYSJ (40S ribosomal protein S3a n=56 Tax=Poaceae TaxID=4479 RepID=RS3A_ORYSJ)

HSP 1 Score: 268 bits (684), Expect = 2.670e-87
Identity = 135/200 (67.50%), Postives = 161/200 (80.50%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMEREDEEEA 221
            G +IASEGLK RVFE SL DL NDED  YRKI+L  EDVQG +VLTNF GM  T DKL SL+KKWQTLIEA VDV+TTDGY+LR+ CIGFTK++ NQ+K+TCYAQASQIR +R+KM +IM  +A+ CDLKELV KFIPE I  EI KA  SI+P+QNV++RKVK LK PKFDL KLME+HGD   ED+G +++R  E+EA
Sbjct:   53 GTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEA 252          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: RS3A2_ARATH (40S ribosomal protein S3a-2 n=77 Tax=Brassicales TaxID=3699 RepID=RS3A2_ARATH)

HSP 1 Score: 267 bits (683), Expect = 3.790e-87
Identity = 135/194 (69.59%), Postives = 158/194 (81.44%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER 215
            G +IASEGLK RVFE SL DL NDED  YRKI+L  EDVQG +VLT F GMD T DKL SL+KKWQTLIEA VDV+TTDGY LR+ CI FTK++ NQ+K+TCYAQ+SQIR +R+KM +IM +EA+ CDLKELV KFIPE I  EI KA Q IYP+QNV+IRKVK LK PKFDL KLME+HGD T EDVG++++R
Sbjct:   53 GTKIASEGLKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDR 246          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: A0A8J1XLG0_OWEFU (40S ribosomal protein S3a n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XLG0_OWEFU)

HSP 1 Score: 267 bits (683), Expect = 3.790e-87
Identity = 130/188 (69.15%), Postives = 159/188 (84.57%), Query Frame = 0
Query:   22 GAEIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDV 209
            G +IAS+GLKGRVFE SL DL NDE + +RK KL  EDVQG +VLTNFHGMDLTRDKLCS++KKWQTLIEA VDVRTTDG+LLR+ CIGFTKK+ NQIK+TCYAQ++Q+RA+RKKMC+IMT E +  DLKE+V K IP++I  +I KA Q IYP+ +VYIRKVK LKKPKFDL KLM++HG+ +++ V
Sbjct:   54 GTKIASDGLKGRVFEVSLADLQNDE-VAFRKFKLVAEDVQGRAVLTNFHGMDLTRDKLCSMVKKWQTLIEANVDVRTTDGFLLRVFCIGFTKKRQNQIKKTCYAQSTQVRAIRKKMCEIMTREVSANDLKEIVNKLIPDSIGKDIEKACQGIYPLHDVYIRKVKILKKPKFDLGKLMDLHGEGSSKTV 240          
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Match: A0A7S2AV79_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AV79_9STRA)

HSP 1 Score: 265 bits (676), Expect = 4.990e-87
Identity = 128/181 (70.72%), Postives = 150/181 (82.87%), Query Frame = 0
Query:   35 FEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDLKELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER 215
            FE SL D NNDED  YRKIKLCCEDVQG +VLTNFHGMDLTRDKLCSLIKKW +LIEA  DVRTTDGY+LR+ CI FT K  NQ+K+TCYAQ++QIRA+RKKM ++MTEEA+KCDL+ELVQK IPE+I  EI K  Q ++P+++ +IRKVK LKKPKFD+TKLMEMHGD   ED G  + R
Sbjct:    1 FEVSLADRNNDEDQQYRKIKLCCEDVQGFNVLTNFHGMDLTRDKLCSLIKKWGSLIEANADVRTTDGYMLRLFCIAFTTKMPNQMKKTCYAQSAQIRAIRKKMVNVMTEEASKCDLRELVQKLIPESIGAEIEKVCQCVFPLRDTFIRKVKVLKKPKFDITKLMEMHGDVAGEDTGTGVNR 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4145.10657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKH7_ECTSI2.410e-12994.4240S ribosomal protein S3a n=2 Tax=Ectocarpus TaxID... [more]
A0A7S2Y1J4_9STRA1.400e-9776.2940S ribosomal protein S3a n=1 Tax=Fibrocapsa japon... [more]
A0A835Z1K4_9STRA1.190e-9573.7140S ribosomal protein S3a n=1 Tax=Tribonema minus ... [more]
A0A7S2W4V3_9STRA1.990e-9171.4340S ribosomal protein S3a n=2 Tax=Sar TaxID=269873... [more]
A0A812NHF5_SYMMI1.730e-9073.2340S ribosomal protein S3a n=2 Tax=Symbiodinium mic... [more]
A0A7S1TRR2_9STRA3.040e-8969.73Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
RS3A_ORYSJ2.670e-8767.5040S ribosomal protein S3a n=56 Tax=Poaceae TaxID=4... [more]
RS3A2_ARATH3.790e-8769.5940S ribosomal protein S3a-2 n=77 Tax=Brassicales T... [more]
A0A8J1XLG0_OWEFU3.790e-8769.1540S ribosomal protein S3a n=1 Tax=Owenia fusiformi... [more]
A0A7S2AV79_9STRA4.990e-8770.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001593Ribosomal protein S3AeSMARTSM01397Ribosomal_S3Ae_2coord: 9..190
e-value: 3.1E-94
score: 329.1
IPR001593Ribosomal protein S3AePFAMPF01015Ribosomal_S3Aecoord: 21..190
e-value: 7.8E-73
score: 244.4
NoneNo IPR availablePANTHERPTHR1183040S RIBOSOMAL PROTEIN S3Acoord: 21..221
NoneNo IPR availablePANTHERPTHR11830:SF040S RIBOSOMAL PROTEIN S3Acoord: 21..221
IPR018281Ribosomal protein S3Ae, conserved sitePROSITEPS01191RIBOSOMAL_S3AEcoord: 30..42
IPR02750040S ribosomal protein S1/3, eukaryotesHAMAPMF_03122Ribosomal_S3Ae_eukcoord: 1..228
score: 27.458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4145contigH-paniculata_contig4145:12558..15052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4145.10657.1mRNA_H-paniculata_contig4145.10657.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4145 12445..15679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4145.10657.1 ID=prot_H-paniculata_contig4145.10657.1|Name=mRNA_H-paniculata_contig4145.10657.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
MSCLSPSCHLRCDAADEWMDNGAEIASEGLKGRVFEFSLGDLNNDEDLGY
RKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTD
GYLLRIACIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEEATKCDL
KELVQKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEM
HGDNTTEDVGMEMEREDEEEAGEDDNEE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001593Ribosomal_S3Ae
IPR018281Ribosomal_S3Ae_CS
IPR027500Ribosomal_S1/3_euk