prot_H-paniculata_contig41337.10633.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41337.10633.1
Unique Nameprot_H-paniculata_contig41337.10633.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: D7G294_ECTSI (18S rRNA aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G294_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.690e-43
Identity = 71/82 (86.59%), Postives = 79/82 (96.34%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            MRRGHHRLLPFLVAANPVNYGKP KL+CAEAIAATLYIVGH+D+AV+VM+QFGWGAEFLR+N +VL+TYAAC DGAEVVKAQ
Sbjct:  156 MRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQ 237          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: A0A835YJ70_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ70_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.080e-34
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            MRRGHHRLLPFLVAANPVNYGKP+KL+CAEA+AATL IVG  ++   VM+QFGWG EFL+INA+VL  YAAC  GAEV+ AQ
Sbjct:  155 MRRGHHRLLPFLVAANPVNYGKPFKLTCAEALAATLVIVGLREQGALVMDQFGWGPEFLKINADVLDRYAACSSGAEVITAQ 236          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: A0A3M6VVZ0_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVZ0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.550e-33
Identity = 59/82 (71.95%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            +R G HRLLPFLVAAN VNYG+P+KLSCAEAIAATLYIVG +D+A++VM++F WGAEFL+INA+ L+ YAAC + AEVV+AQ
Sbjct:  123 LRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLQDEAIQVMDEFSWGAEFLKINADCLQAYAACTNSAEVVEAQ 204          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: G4ZJA7_PHYSP (18S rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA7_PHYSP)

HSP 1 Score: 124 bits (312), Expect = 1.320e-32
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            +R G HRLLPFLVAAN VNYG+P+KLSCAEAIAATLYIVG +D+AV++M++F WGAEFL+INA+ L+ YAAC D A+VV AQ
Sbjct:  123 LRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACEDSAQVVAAQ 204          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: A0A7R9UC21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC21_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.100e-32
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            +R GHHRLLPFLVAANPVNYG+P KLSCAEA+AATL IVGH++ A  ++++FGWG EFL+INAE+L  YAAC    EVV+AQ
Sbjct:   97 LRSGHHRLLPFLVAANPVNYGRPSKLSCAEALAATLVIVGHQELAETLLDRFGWGREFLKINAELLARYAACESAEEVVQAQ 178          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: A0A6A3KBB7_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KBB7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.590e-32
Identity = 59/82 (71.95%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            +R G HRLLPFLVAAN VNYG+P+KLSCAEAIAATLYIVG +D+AV++M++F WGAEFL+INA+ L+ YAAC + AEVV+AQ
Sbjct:  123 VRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACENSAEVVEAQ 204          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: A0A225UDS4_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UDS4_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.970e-32
Identity = 56/83 (67.47%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQV 83
            +R G HRLLPFLVAAN VNYG+P+KLSCAEAIAATLYIVG +++AV++M++F WGAEFL+INA+ L+ Y+AC +  +VV+AQV
Sbjct:  120 LRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKEEAVQLMDEFSWGAEFLKINADCLEAYSACENSEQVVEAQV 202          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: M4BTS6_HYAAE (18S rRNA aminocarboxypropyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTS6_HYAAE)

HSP 1 Score: 123 bits (308), Expect = 8.830e-32
Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            +R G HRLLPFLVAAN VNYG+P+KLSCAEAIAATLYIVG +D+A +VM++F WGAEFL+INA+ L  YAAC + A+VVKAQ
Sbjct:  123 LRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGCQDEARQVMDEFSWGAEFLKINADCLAAYAACENSAQVVKAQ 204          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: A0A1Z5KGN3_FISSO (18S rRNA aminocarboxypropyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGN3_FISSO)

HSP 1 Score: 119 bits (299), Expect = 5.420e-31
Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            M+ GHHRLLPF+VAAN VNYGKP KLSCAEA AATLYI G +D A+ +M++F WG EFLR+N EVL+ YA+C D  EVV+ Q
Sbjct:  139 MQAGHHRLLPFMVAANTVNYGKPSKLSCAEAAAATLYICGKQDAAIALMDEFSWGREFLRLNKEVLELYASCTDSTEVVEKQ 220          
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Match: D0P2X0_PHYIT (18S rRNA aminocarboxypropyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=D0P2X0_PHYIT)

HSP 1 Score: 119 bits (297), Expect = 1.610e-30
Identity = 55/82 (67.07%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMNQFGWGAEFLRINAEVLKTYAACLDGAEVVKAQ 82
            +R G HRLLPFLVAAN VNYG+P+KLSCAEAIAATLYIVG + +A ++M++F WGAEFL+INA+ L+ Y+AC +  EVV+AQ
Sbjct:   80 LRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKQEATQLMDEFSWGAEFLKINADCLEAYSACTNSTEVVEAQ 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41337.10633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G294_ECTSI1.690e-4386.5918S rRNA aminocarboxypropyltransferase n=2 Tax=Ect... [more]
A0A835YJ70_9STRA1.080e-3474.3918S rRNA aminocarboxypropyltransferase n=1 Tax=Tri... [more]
A0A3M6VVZ0_9STRA4.550e-3371.9518S rRNA aminocarboxypropyltransferase n=2 Tax=Per... [more]
G4ZJA7_PHYSP1.320e-3271.9518S rRNA aminocarboxypropyltransferase n=1 Tax=Phy... [more]
A0A7R9UC21_9STRA2.100e-3269.51Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6A3KBB7_9STRA3.590e-3271.9518S rRNA aminocarboxypropyltransferase n=2 Tax=Phy... [more]
A0A225UDS4_9STRA3.970e-3267.4718S rRNA aminocarboxypropyltransferase n=1 Tax=Phy... [more]
M4BTS6_HYAAE8.830e-3271.9518S rRNA aminocarboxypropyltransferase n=1 Tax=Hya... [more]
A0A1Z5KGN3_FISSO5.420e-3167.0718S rRNA aminocarboxypropyltransferase n=1 Tax=Fis... [more]
D0P2X0_PHYIT1.610e-3067.0718S rRNA aminocarboxypropyltransferase n=11 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007177Ribosome biogenesis protein, C-terminalPFAMPF04034Ribo_biogen_Ccoord: 3..82
e-value: 3.5E-35
score: 120.5
IPR022968Ribosome biogenesis proteinPANTHERPTHR20426FAMILY NOT NAMEDcoord: 1..82
NoneNo IPR availablePRODOMPD016638coord: 1..82
e-value: 7.0E-24
score: 268.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41337contigH-paniculata_contig41337:155..1011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41337.10633.1mRNA_H-paniculata_contig41337.10633.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41337 152..1011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41337.10633.1 ID=prot_H-paniculata_contig41337.10633.1|Name=mRNA_H-paniculata_contig41337.10633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MRRGHHRLLPFLVAANPVNYGKPYKLSCAEAIAATLYIVGHEDKAVEVMN
QFGWGAEFLRINAEVLKTYAACLDGAEVVKAQVCSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007177TDD_dom
IPR022968Rbsm_biogenesis