prot_H-paniculata_contig4119.10607.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4119.10607.1
Unique Nameprot_H-paniculata_contig4119.10607.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A6H5K8V0_9PHAE (MutS_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V0_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.560e-30
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 0
Query:    1 KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEE 62
            KVLLTRVGEFYETYGVDAVMMMQHAGLN+MGQE+RAGCPR+NVQQT+DGLT AGLTVAVYEE
Sbjct:  493 KVLLTRVGEFYETYGVDAVMMMQHAGLNKMGQEIRAGCPRRNVQQTIDGLTGAGLTVAVYEE 554          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: W7TDJ9_9STRA (Dna mismatch repair protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDJ9_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.570e-24
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEEVGRL 66
            KV+LTRVGEFYETYGVDA+M++++AGLN MG + +AGCP KNVQ TLDGLTSAGLTVAV EE+  L
Sbjct:  325 KVILTRVGEFYETYGVDAIMLVEYAGLNPMGNKAKAGCPVKNVQATLDGLTSAGLTVAVIEEISDL 390          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A4D9CWC2_9STRA (DNA mismatch repair protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWC2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.930e-24
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEEVGRL 66
            KV+LTRVGEFYETYGVDA+M++++AGLN MG + +AGCP KNVQ TLDGLTSAGLTVAV EE+  L
Sbjct:  187 KVILTRVGEFYETYGVDAIMLVEYAGLNPMGSKAKAGCPVKNVQATLDGLTSAGLTVAVIEEISDL 252          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A7S2KYZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KYZ1_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.370e-22
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    2 VLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEE 62
            ++L RVG+FYETYG+DA+M+++H GLN M  + RAGCP +NVQ TLDGLT+AG  VAVYEE
Sbjct:   58 IMLVRVGDFYETYGIDAIMLVEHCGLNPMAGKARAGCPWRNVQATLDGLTNAGFRVAVYEE 118          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A0G4EAV3_VITBC (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAV3_VITBC)

HSP 1 Score: 97.4 bits (241), Expect = 7.810e-22
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 0
Query:    1 KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEEV 63
            KVLL RVGEFYETYG+DA+MM+++AGLN MG + +AGCP +N+Q TLD LT AGLTVAV+EE+
Sbjct:  110 KVLLVRVGEFYETYGIDALMMVEYAGLNPMGSKAKAGCPIRNIQSTLDSLTRAGLTVAVFEEL 172          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A7S4BGT8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGT8_CHRCT)

HSP 1 Score: 97.4 bits (241), Expect = 7.810e-22
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEEVG 64
            K+LL RVG+FYETYGVDA+M++++AGLN MG + RAGCP  NVQ TLD LT+AGLTVAVYEE+G
Sbjct:  225 KLLLVRVGDFYETYGVDALMLVEYAGLNPMGGKCRAGCPIANVQPTLDDLTAAGLTVAVYEEMG 288          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A8J2SVM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVM6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.060e-21
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEE 62
            KVLL RVGEFYE +GVDA ++++H GLN MG +VRAGCP +N+QQTLDGLT  GLTVAVYEE
Sbjct:   94 KVLLVRVGEFYEAWGVDATLLVEHCGLNPMGDKVRAGCPWRNLQQTLDGLTRNGLTVAVYEE 155          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A7S3QFU6_9STRA (DNA mismatch repair protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QFU6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.710e-21
Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    2 VLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEE 62
            V+LTRVGEFYE +G+DA+M++QH GLN MG + RAGCP KNVQ TLDGLT  G  VAVYEE
Sbjct:  265 VILTRVGEFYEAFGIDAIMLVQHCGLNPMGSKARAGCPIKNVQATLDGLTETGFRVAVYEE 325          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A0M0J965_9EUKA (DNA mismatch repair protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J965_9EUKA)

HSP 1 Score: 92.8 bits (229), Expect = 3.260e-20
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEEV 63
            ++LL RVGEFYE +G DA+M++Q AGLN MG + RAGCP +NVQ TLD LTSAGLTVAVYEEV
Sbjct:   93 QLLLIRVGEFYEAFGFDALMLVQWAGLNPMGSKCRAGCPVQNVQATLDALTSAGLTVAVYEEV 155          
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Match: A0A7S2UPS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPS2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.490e-20
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    2 VLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGLTSAGLTVAVYEE 62
            V+LTRVG+FYE +G+DA+++++  GLN MG + RAGCP KNVQQTLD LT+AGL VAV EE
Sbjct:   42 VILTRVGDFYEAFGLDAILLVEFCGLNPMGGKARAGCPVKNVQQTLDCLTTAGLRVAVIEE 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4119.10607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8V0_9PHAE1.560e-3091.94MutS_I domain-containing protein n=1 Tax=Ectocarpu... [more]
W7TDJ9_9STRA1.570e-2474.24Dna mismatch repair protein n=1 Tax=Nannochloropsi... [more]
A0A4D9CWC2_9STRA3.930e-2474.24DNA mismatch repair protein n=2 Tax=Monodopsidacea... [more]
A0A7S2KYZ1_9STRA4.370e-2265.57Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A0G4EAV3_VITBC7.810e-2269.84DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A7S4BGT8_CHRCT7.810e-2271.88Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A8J2SVM6_9STRA1.060e-2172.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3QFU6_9STRA3.710e-2170.49DNA mismatch repair protein n=1 Tax=Chaetoceros de... [more]
A0A0M0J965_9EUKA3.260e-2071.43DNA mismatch repair protein n=1 Tax=Chrysochromuli... [more]
A0A7S2UPS2_9STRA3.490e-2065.57Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016151DNA mismatch repair protein MutS, N-terminalGENE3D3.40.1170.10coord: 1..67
e-value: 2.1E-10
score: 42.4
IPR016151DNA mismatch repair protein MutS, N-terminalSUPERFAMILY55271DNA repair protein MutS, domain Icoord: 2..64
IPR007695DNA mismatch repair protein MutS-like, N-terminalPFAMPF01624MutS_Icoord: 1..63
e-value: 1.2E-8
score: 35.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4119contigH-paniculata_contig4119:14760..14999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4119.10607.1mRNA_H-paniculata_contig4119.10607.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4119 14760..14999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4119.10607.1 ID=prot_H-paniculata_contig4119.10607.1|Name=mRNA_H-paniculata_contig4119.10607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
KVLLTRVGEFYETYGVDAVMMMQHAGLNRMGQEVRAGCPRKNVQQTLDGL
TSAGLTVAVYEEVGRLLPLPCCPGLRTSTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016151DNA_mismatch_repair_MutS_N
IPR007695DNA_mismatch_repair_MutS-lik_N