prot_H-paniculata_contig41.10562.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41.10562.1
Unique Nameprot_H-paniculata_contig41.10562.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length778
Homology
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: D8LU65_ECTSI (Pre-mRNA-splicing factor 38 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU65_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.250e-104
Identity = 213/274 (77.74%), Postives = 225/274 (82.12%), Query Frame = 0
Query:   34 YWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQGWDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWDAAAEVSEXXXXXXXXXXXXGYPKAGNRRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEALPAKKSDTGEDDKFRRNPQPPAAASTAEIEAREALAMSLIQDIQDERAGMGS 307
            YWKEHCFGLTAETLVDKAM LTHLGGTFGGNQQP+KFLCLVLKMLQIQPEKEIIIEFIKN+DYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIR+RLTQGW+L+TIDQ IEELLH DI CSIALPRLPKRVALEDSKLLKG R+S+LDEDWDA  EVS       XXXXXX           XXXXX  XXXXXXXXXXXXXXXXXXXXXX    G +            K+ +NP+PP A S AEIEAREALAMSLIQD+ DERAGMGS
Sbjct:    6 YWKEHCFGLTAETLVDKAMMLTHLGGTFGGNQQPTKFLCLVLKMLQIQPEKEIIIEFIKNEDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRLRLTQGWELRTIDQQIEELLHSDISCSIALPRLPKRVALEDSKLLKGARVSVLDEDWDAGGEVSAGEPEESXXXXXXXXXXX--XXXXXXXXXDRXXXXXXXXXXXXXXXXXXXXXXKGKRGSSXXXXXXXXXXXXKYSKNPKPPTAVSAAEIEAREALAMSLIQDVADERAGMGS 277          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: A0A7S2V2V8_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2V8_9STRA)

HSP 1 Score: 279 bits (713), Expect = 5.160e-86
Identity = 127/170 (74.71%), Postives = 148/170 (87.06%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQGWDLQTIDQVIEELLHKDICCSIALPRLPKRVAL 170
            MAN TDPLARTVHGTNPQNL+EKI R KIY ++YWKEHCFGL+AETL+DKAM L H+GGT+GGN++PSKFLCL+LKMLQ+QPEKEI+IE IKN+DYKY+R LGAFYLRLVG PADIYQYLEPLYNDYRK+R+R   GW+L  +D+ I+ LL +D  C IALP LPKR AL
Sbjct:    7 MANRTDPLARTVHGTNPQNLVEKILRMKIYGSIYWKEHCFGLSAETLIDKAMDLGHVGGTYGGNRKPSKFLCLILKMLQLQPEKEIVIELIKNEDYKYIRALGAFYLRLVGRPADIYQYLEPLYNDYRKLRVRKYMGWELTHMDEYIDMLLREDYSCDIALPHLPKRQAL 176          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: W7TQL1_9STRA (Pre-mRNA-splicing factor 38 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL1_9STRA)

HSP 1 Score: 286 bits (732), Expect = 4.870e-85
Identity = 137/187 (73.26%), Postives = 155/187 (82.89%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQGWDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDED 187
            MAN TDP   TVHGTNPQ LIEKI RQKIYN+LYWKEHCFGLTAETLVDKA+ L   GG +GG Q+P+KF+CLVLKMLQ+QPEKEI++EFIKN+DYKY+RVLGAFYLRLVG P DIYQYLEPLYNDYRK+R R   GW L+ +D+ IEELL  D CC +ALP LPKR  LED KLL  PRIS LD++
Sbjct:    1 MANRTDPTVTTVHGTNPQFLIEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLKAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAGWALKHMDEFIEELLTSDYCCDVALPHLPKRHLLEDQKLL-APRISALDDE 186          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: A0A836CM94_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM94_9STRA)

HSP 1 Score: 277 bits (709), Expect = 4.200e-84
Identity = 129/189 (68.25%), Postives = 161/189 (85.19%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQGWDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWD 189
            MAN TDP A +VHGTNPQ L+EKITR KIYN+ YWKEHCFGLTAE +V+KA+ L ++GG++GGN +PSKFLCLVLKMLQ+QPEK+I+IEFIKN+++KYVRVLGAFY+RLVG P DIYQYLEPLYNDYRK+R+R T GW ++ +D++I+ELL  D    IALP LPKR ALE++  LK PRIS+L++ W+
Sbjct:    1 MANTTDPFAISVHGTNPQYLVEKITRTKIYNSQYWKEHCFGLTAEGIVEKAVDLKYVGGSYGGNARPSKFLCLVLKMLQLQPEKDIVIEFIKNEEFKYVRVLGAFYMRLVGRPIDIYQYLEPLYNDYRKVRVRQTMGWAMKHVDEIIDELLRGDHSFDIALPHLPKRGALEETGALK-PRISVLEDAWE 188          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: A0A7G2ECV5_ARATH (Pre-mRNA-splicing factor 38 n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A7G2ECV5_ARATH)

HSP 1 Score: 273 bits (697), Expect = 9.170e-83
Identity = 130/190 (68.42%), Postives = 159/190 (83.68%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQG-WDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWD 189
            MAN TDPLA+ + GTNPQNL+EKI R KIY + +WKE CFGLTAETLVDKAM L HLGGTFGG+++P+ FLCL+LKMLQIQPEKEI++EFIKNDDYKYVR+LGAFYLRL GT  D+Y+YLEPLYNDYRK+R +L+ G + L  +D+VIEELL KD  C IA+PRL KR  LE + LL+ PR S+L++D++
Sbjct:    1 MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGTFGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYLEPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLE-PRKSVLEDDFE 189          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: A0A1Q3D6I5_CEPFO (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D6I5_CEPFO)

HSP 1 Score: 275 bits (703), Expect = 6.690e-82
Identity = 133/197 (67.51%), Postives = 161/197 (81.73%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQG-WDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWDAAAEVSE 196
            MAN TDP+A+++HGTNPQNLIEKI R KIY N YWKE CFGLTAETLVDKAM L HLGGTFGGN++P+ F+CLV+KMLQIQPEKEI+IEFIKN+DYKYVR+LGAFYLR+ GT  D+Y+YLEPLYNDYRK+R RL +G + L  +D+VI+ELL KD  C IALPR+ KR  LE    L+ PR S+L++D++   E  E
Sbjct:    1 MANRTDPMAKSIHGTNPQNLIEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRITGTDIDVYRYLEPLYNDYRKLRRRLAEGNFSLTHVDEVIDELLTKDYSCDIALPRIKKRWTLETIGGLE-PRKSVLEDDFEEEEEKEE 196          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: A0A0D3B635_BRAOL (Pre-mRNA-splicing factor 38 n=11 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3B635_BRAOL)

HSP 1 Score: 274 bits (701), Expect = 9.310e-82
Identity = 130/190 (68.42%), Postives = 160/190 (84.21%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQG-WDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWD 189
            MAN TDPLA+ + GTNPQNL+EKI R KIYN+ +WKE CFGLTAETLVDKAM L H+GGTFGGN++P+ FLCL+LKMLQIQPEKEI++EFIKNDDYKYVR+LGAFYLRL G+  D+Y+YLEPLYNDYRK+R +L+ G + L  +D+VIEELL KD  C IA+PRL KR  LE + LL+ PR S+L++D++
Sbjct:    1 MANRTDPLAKNIRGTNPQNLVEKIVRTKIYNHTFWKEQCFGLTAETLVDKAMELDHVGGTFGGNRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGSDVDVYRYLEPLYNDYRKVRQKLSDGRFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLE-PRKSVLEDDFE 189          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: UPI0018ADD529 (pre-mRNA-splicing factor 38-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018ADD529)

HSP 1 Score: 275 bits (702), Expect = 9.960e-82
Identity = 129/190 (67.89%), Postives = 160/190 (84.21%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQG-WDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWD 189
            MAN TDPLA+++HGTNPQNL+EKI R KIY N YWKE CFGLTAETLVDKAM L HLGGTFGGN++P+ F+CLV+KMLQIQP+K+I++EFIKN+DYKYVR+LGAFY+RL GT  D+YQYLEPLYNDYRK+R + + G + L  +D+VI+ELL KD  C IALPR+ KR  LE + +L+ PR S+LDED++
Sbjct:    1 MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRRPTPFICLVMKMLQIQPDKDIVVEFIKNEDYKYVRILGAFYMRLTGTVTDVYQYLEPLYNDYRKLRRKTSDGSFSLTHVDEVIDELLTKDYSCDIALPRVQKRWTLETTGVLE-PRKSVLDEDFE 189          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: A0A6P5GTV5_ANACO (Pre-mRNA-splicing factor 38 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GTV5_ANACO)

HSP 1 Score: 271 bits (692), Expect = 1.180e-81
Identity = 129/190 (67.89%), Postives = 159/190 (83.68%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQG-WDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWD 189
            MAN TDP A+++HGTNPQNL+EKI R KIY N YWKE CFGLTAETLVDKAM L HLGGTFGGN++P+ F+CLV+KMLQIQPEK+I++EFIKN+DYKYVRVLGAFY+RL GT AD+YQYLEPLYNDYRK+R +L  G + L  +D+VI+ELL KD  C +ALPR+ KR  LE + +L+ PR S L++D++
Sbjct:    1 MANRTDPSAKSIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYMRLTGTVADVYQYLEPLYNDYRKLRRKLPDGSFCLTHVDEVIDELLTKDYSCDVALPRIQKRWNLETTGVLE-PRRSALEDDFE 189          
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Match: A0A5A7TYK4_CUCME (Pre-mRNA-splicing factor 38 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TYK4_CUCME)

HSP 1 Score: 271 bits (693), Expect = 2.730e-81
Identity = 132/197 (67.01%), Postives = 158/197 (80.20%), Query Frame = 0
Query:    1 MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDKAMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVRVLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQG-WDLQTIDQVIEELLHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWDAAAEVSE 196
            MAN TDP A+++ GTNPQNL+EKI R KIY N YWKE CFGLTAETLVDKAM L HLGGT+GGN++P+ F+CLV+KMLQIQPEKEI+IEFIKN+DYKYVRVLGAFYLRL GT  D+Y+YLEPLYNDYRK+R +L+ G + L  +D+VI+ELL KD  C IALPR+ KR  LE S  L  PR S L++D++   E  E
Sbjct:    1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTYGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLP-PRKSALEDDFEEEEEKEE 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41.10562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU65_ECTSI1.250e-10477.74Pre-mRNA-splicing factor 38 n=1 Tax=Ectocarpus sil... [more]
A0A7S2V2V8_9STRA5.160e-8674.71Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fib... [more]
W7TQL1_9STRA4.870e-8573.26Pre-mRNA-splicing factor 38 n=2 Tax=Monodopsidacea... [more]
A0A836CM94_9STRA4.200e-8468.25Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Tri... [more]
A0A7G2ECV5_ARATH9.170e-8368.42Pre-mRNA-splicing factor 38 n=1 Tax=Arabidopsis th... [more]
A0A1Q3D6I5_CEPFO6.690e-8267.51Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Cep... [more]
A0A0D3B635_BRAOL9.310e-8268.42Pre-mRNA-splicing factor 38 n=11 Tax=Brassicaceae ... [more]
UPI0018ADD5299.960e-8267.89pre-mRNA-splicing factor 38-like n=1 Tax=Dioscorea... [more]
A0A6P5GTV5_ANACO1.180e-8167.89Pre-mRNA-splicing factor 38 n=1 Tax=Ananas comosus... [more]
A0A5A7TYK4_CUCME2.730e-8167.01Pre-mRNA-splicing factor 38 n=1 Tax=Cucumis melo v... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005037Pre-mRNA-splicing factor 38PFAMPF03371PRP38coord: 11..173
e-value: 1.8E-59
score: 200.5
IPR005037Pre-mRNA-splicing factor 38PANTHERPTHR23142UNCHARACTERIZEDcoord: 1..525
NoneNo IPR availablePANTHERPTHR23142:SF1PRE-MRNA-SPLICING FACTOR 38Acoord: 1..525

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41contigH-paniculata_contig41:55822..64612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41.10562.1mRNA_H-paniculata_contig41.10562.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41 55822..65776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41.10562.1 ID=prot_H-paniculata_contig41.10562.1|Name=mRNA_H-paniculata_contig41.10562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=778bp
MANATDPLARTVHGTNPQNLIEKITRQKIYNNLYWKEHCFGLTAETLVDK
AMALTHLGGTFGGNQQPSKFLCLVLKMLQIQPEKEIIIEFIKNDDYKYVR
VLGAFYLRLVGTPADIYQYLEPLYNDYRKIRIRLTQGWDLQTIDQVIEEL
LHKDICCSIALPRLPKRVALEDSKLLKGPRISMLDEDWDAAAEVSEEEEE
EDDDDDDGGYPKAGNRRRERDRDRDSRSRSRSRGRERGSRSRDRNRGDGD
RDGEALPAKKSDTGEDDKFRRNPQPPAAASTAEIEAREALAMSLIQDIQD
ERAGMGSSAKAKGKAKAKAIAAAAAAASSSSGHKASEKFTEGRHNDGRGR
SVSRSRSRSLSSSEGREDKRRKRDFPVAYDRDRERERVRGGGGDKKKTID
KESSTTGKYKDDDKDDDKTLGGVGAEKESKDGGHGGATLAESAKVGENSK
TRGDDAYSDEGVRRDRKRSRSRSRGRGRRDRARSKSKSKSRSRSRSRSRD
KDGSGRDRTGRRIRSSSRSRSDSREAHRNRRRERSRSRSRENRRRHNRDR
DASTSSERGRRGGGGGGRGAGQDHRDRDRDRGRDRAGGGGRRGRSRSVSR
SRERRGRSRSYERGWGGGRRDRGGGRRSRSRSRSADSWRGGRDAGGRSSR
RSKSRSGSRSRSRSHSKYVFFVFYVRPRSPTRERKRRRSRSPSSSTSRSP
PRRDASEEDSYKHAEKPAGAGKDDKKTRKPKGSKLFKQTKEQDDRGGGGG
GKGGKGSTGSVEYWNDERAKLGLKPLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005037PRP38