prot_H-paniculata_contig1163.1055.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1163.1055.1
Unique Nameprot_H-paniculata_contig1163.1055.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length785
Homology
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BLAST of mRNA_H-paniculata_contig1163.1055.1 vs. uniprot
Match: D8LFX5_ECTSI (EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX5_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.540e-8
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 0 
Query:  599 CTADGCQQRPLFGIEGTKQAIFCSQHKAPGMTNVLCRRCEVESCKHQPSFAVEGSRA 655
            C  + C +R  +G++GTK+A FC+QH+  GM NVL  RCE E CK +P+F + G +A
Sbjct:    5 CDHEFCPKRAHYGVDGTKRAQFCAQHRLGGMVNVLAPRCETEGCKKRPTFGIPGCKA 61
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BLAST of mRNA_H-paniculata_contig1163.1055.1 vs. uniprot
Match: A0A6H5JGG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG2_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 5.800e-5
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0 
Query:  594 RSRPTCTADGCQQRPLFGIEGTKQAIFCSQHKAPGMTNVLCRRC 637
            R R  C  DGC  RP +G  G K+A FCSQHK PGM N++ +RC
Sbjct:   22 RQRLCCQEDGCTTRPSYGNAGCKKAEFCSQHKKPGMMNLVSKRC 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1163.1055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFX5_ECTSI1.540e-847.37EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A6H5JGG2_9PHAE5.800e-554.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1163contigH-paniculata_contig1163:2883..7142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1163.1055.1mRNA_H-paniculata_contig1163.1055.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1163 2665..7301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1163.1055.1 ID=prot_H-paniculata_contig1163.1055.1|Name=mRNA_H-paniculata_contig1163.1055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=785bp
MECQTPSLMGTTSSAPLNPDVLRSPSENVLSAAAASPPPPPHHPPSAGRR
GDGHMVRSTGQEDVTARFPANGSRTDTDARASAGGGGGGVSDVNDKKFRI
ENHTALGYHSNSFEHDNGAAAAGAAAFCDAALPQESSASSKRRAGEGGAR
AAAAAAMAAVAEASGEMAAHLGPAEGPLRKRRARELQEAEAVKEEARAAA
FASGSGDFADGQGLGNPGSSSNHGGVPTTMPGSMHMVQAGGAFPAHSGGS
SGVLGDDMDGDGDFGFGGRRRGSGDGRVGGGGGGVHGVGDAGFVSFPNAH
SAPSAMGEFLSETLGDNNNAVVRGSVPRSGVGSIAHSPMVSAAAGLPATA
AAVGITPPPASFPLSPGTAMNASSAVGLVSPPSSMQMQMSVSSGLGGMGH
PFMSLPSTSAGAGGAPHNPSSGGLAVSSASPGSGVYSHSYNFLPVSGHSL
MNQSASAALSPEAEAANAAVAAAAAAAASAAAFASTRPPPFSSSGGFFQT
MTSMSSTAPTDAGGTPSDFDGGLGAGGGGGGALAPLAAIFLASPSSGMAF
SGGSSTGSLGGRTVKAAGHQRKNSRDAASRKLGASGGETPRRNRSRPTCT
ADGCQQRPLFGIEGTKQAIFCSQHKAPGMTNVLCRRCEVESCKHQPSFAV
EGSRAVRCATHKTPGMVNVAAPRCKSPGCMVCPSFGKQGERKASFCATHR
REGDVDLVTRRCHHEGCIHRPVFGHPPEKKAFYCASHKLEGMVNVFAPRC
AHPDCTHQPSYGLPGSRRSTHCGKHRTQHHENKR*
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