mRNA_H-paniculata_contig4091.10549.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A6H5KYG4_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYG4_9PHAE) HSP 1 Score: 243 bits (619), Expect = 9.300e-76 Identity = 117/134 (87.31%), Postives = 123/134 (91.79%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQA 402
LGMNEFELSKN QLD + KDLNV+ FPF+DNSFDVVTCVVSVDYLNKPLEVF EI RVLRPGGKAIMSMSN RCFPTKAIQIW+QTNDMEHIFIVGSYFHYAGGF+PP SHDISPNPGRSDPMYIVE RK+A
Sbjct: 145 LGMNEFELSKNVQLDEYRVKDLNVDAKFPFDDNSFDVVTCVVSVDYLNKPLEVFNEIRRVLRPGGKAIMSMSN-RCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFDPPVSHDISPNPGRSDPMYIVEGRKKA 277
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A7S2FU79_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU79_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.940e-65 Identity = 99/133 (74.44%), Postives = 118/133 (88.72%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQ 399
LGMN++ELS+N+QLD + AKDLNV+ FPFEDN++D+VTCVVSVDYLN+P E+F+EI+RVL+PGG AIMSMSN RCFPTKAIQIW QTND+EH+FIVGSYFHY GGFEPP + DISP PGRSDPM IV+ K+
Sbjct: 64 LGMNDYELSQNKQLDDYVAKDLNVDAVFPFEDNTYDIVTCVVSVDYLNRPKEIFEEIHRVLKPGGCAIMSMSN-RCFPTKAIQIWLQTNDLEHVFIVGSYFHYQGGFEPPFAKDISPAPGRSDPMLIVQGVKK 195
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A7S2XQM1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQM1_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.150e-64 Identity = 95/134 (70.90%), Postives = 117/134 (87.31%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQA 402
LGMNE+ELS+N+QL ++ KDLN +PTFP+EDNSFD +TCVVSVDYLNKP E+F EI RVLRPGG+ +++MSN RCFPTKA +IW QTNDMEHIFI GS+FH++G FEPPS DISPNPGRSDP++IV+A++ A
Sbjct: 21 LGMNEYELSQNKQLSSYNVKDLNKDPTFPYEDNSFDRITCVVSVDYLNKPQEIFNEIGRVLRPGGECMLAMSN-RCFPTKAFRIWLQTNDMEHIFIAGSFFHFSGFFEPPSCDDISPNPGRSDPLFIVKAKRSA 153
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A6V1S5I5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S5I5_HETAK) HSP 1 Score: 212 bits (540), Expect = 5.700e-64 Identity = 98/132 (74.24%), Postives = 113/132 (85.61%), Query Frame = 1
Query: 4 GMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQ 399
GMNE+ELSKN QLD + +DLNV P P+ED SFD+VTCVVSVDYLN+PL +F E+ RVLRPGG+A+MSMSN RCFPTKAI IW QTND+EH+FIVGSYFHYAGGF P + DISPNPGRSDPMYIV+A K+
Sbjct: 135 GMNEYELSKNPQLDDYFVRDLNVRPELPYEDESFDLVTCVVSVDYLNQPLAIFDEVRRVLRPGGRAVMSMSN-RCFPTKAINIWLQTNDLEHLFIVGSYFHYAGGFNAPEALDISPNPGRSDPMYIVQATKK 265
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: B5Y3G7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3G7_PHATC) HSP 1 Score: 207 bits (526), Expect = 2.100e-62 Identity = 96/133 (72.18%), Postives = 114/133 (85.71%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQ 399
LGMNE+ELS+N LD++ KDLN PT PF+DNSFD VTCVVSVDYLNKPLEVF+EI RVLRPGG+ I+SMSN RCFPTKA +IW QT+D+EH+FI GS+FHYA F+PPS DISPNPGRSDP++IV+A K+
Sbjct: 97 LGMNEYELSQNPVLDSYVVKDLNKEPTIPFDDNSFDKVTCVVSVDYLNKPLEVFQEIGRVLRPGGECILSMSN-RCFPTKAFRIWLQTSDLEHVFIAGSFFHYAEKFDPPSGKDISPNPGRSDPLFIVKAAKK 228
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A7S2NQ14_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NQ14_9STRA) HSP 1 Score: 204 bits (519), Expect = 7.060e-62 Identity = 94/133 (70.68%), Postives = 113/133 (84.96%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQ 399
LGMNE+ELS+N+QL ++ KDLN +PTFP+EDNSFD VTCVVS+DYLNKP +VF EI RVLRPGG +++MSN RCFPTKA +IW TND+EHIFI GS+FHY+G F+PPS DISPNPG SDPMYIV+A K+
Sbjct: 58 LGMNEYELSQNKQLSSYNVKDLNEDPTFPYEDNSFDKVTCVVSIDYLNKPKQVFAEIARVLRPGGTCMLAMSN-RCFPTKAFRIWLMTNDLEHIFIAGSFFHYSGFFDPPSCDDISPNPGMSDPMYIVKASKK 189
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: B8C942_THAPS (Methyltransf_11 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C942_THAPS) HSP 1 Score: 202 bits (514), Expect = 1.140e-60 Identity = 95/134 (70.90%), Postives = 114/134 (85.07%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQA 402
LGMNE+ELS+NEQL +F KDLN +PTFPF D FD VTCVVSVDYLN+P ++FKEI RVLRPGG+ I+SMSN RCFPTKA +IW QTND+EHIFIVGS+FHYAG F+ + DISPNPGRSDP++IV+A K++
Sbjct: 91 LGMNEYELSQNEQLSSFVVKDLNKDPTFPFGDEEFDKVTCVVSVDYLNQPEKIFKEIARVLRPGGECIISMSN-RCFPTKAFRIWLQTNDLEHIFIVGSFFHYAGQFDAATCEDISPNPGRSDPLFIVKAAKKS 223
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A7S1D8M0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8M0_CYCTE) HSP 1 Score: 201 bits (511), Expect = 1.660e-60 Identity = 93/134 (69.40%), Postives = 112/134 (83.58%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQA 402
LGMNE+ELS+N QL +F KDLN +PT P+ED SFD +TCVVSVDYLNKP E+F EI RVLRPGG+ +++MSN RCFPTKA QIW QTND+EHIFI GS+FHY FEPP+ DISPNPG SDP+YIV+A+++A
Sbjct: 70 LGMNEYELSQNPQLSSFDVKDLNSDPTLPYEDQSFDRITCVVSVDYLNKPREIFGEIGRVLRPGGECMLAMSN-RCFPTKAFQIWLQTNDLEHIFIAGSFFHYTDLFEPPTCDDISPNPGLSDPLYIVKAKRKA 202
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A1E7ELA4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ELA4_9STRA) HSP 1 Score: 200 bits (509), Expect = 7.330e-60 Identity = 94/129 (72.87%), Postives = 110/129 (85.27%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVE 387
LGMNE+ELS+N QL F KDLN +P FPFED+SFD VTCVVSVDYLNKPL+VFKEI RVLRPGG+ ++SMSN RCFPTKA +IW QT+D+EHIFI GS+FHY+ F+ PS DISPNPGRSDP+YIV+
Sbjct: 96 LGMNEYELSQNPQLTDFVVKDLNADPVFPFEDSSFDKVTCVVSVDYLNKPLQVFKEIGRVLRPGGECLISMSN-RCFPTKAFKIWLQTSDLEHIFITGSFFHYSDLFDVPSCSDISPNPGRSDPLYIVK 223
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Match: A0A1Z5JF71_FISSO (Methyltransf_11 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JF71_FISSO) HSP 1 Score: 200 bits (508), Expect = 3.230e-59 Identity = 93/134 (69.40%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 1 LGMNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEVFKEINRVLRPGGKAIMSMSNSRCFPTKAIQIWSQTNDMEHIFIVGSYFHYAGGFEPPSSHDISPNPGRSDPMYIVEARKQA 402
LGMNEFELSKN QL + ++LN NP FPF+D SFD VTCVVS+DYL +PLEV KEI RVLRPGG+AI+S+SN RCFPTKA+QIW QT+D+EHIFIVGS+FHYAG F+PP D SPNPGRSDP++I+ A++ +
Sbjct: 132 LGMNEFELSKNPQLTDYVVQNLNKNPKFPFDDASFDKVTCVVSIDYLTQPLEVVKEIGRVLRPGGEAIISISN-RCFPTKAMQIWLQTSDLEHIFIVGSFFHYAGCFDPPKCTDASPNPGRSDPLFIITAKRSS 264 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4091.10549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4091.10549.1 >prot_H-paniculata_contig4091.10549.1 ID=prot_H-paniculata_contig4091.10549.1|Name=mRNA_H-paniculata_contig4091.10549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp MNEFELSKNEQLDTFTAKDLNVNPTFPFEDNSFDVVTCVVSVDYLNKPLEback to top mRNA from alignment at H-paniculata_contig4091:233..4583+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4091.10549.1 ID=mRNA_H-paniculata_contig4091.10549.1|Name=mRNA_H-paniculata_contig4091.10549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4351bp|location=Sequence derived from alignment at H-paniculata_contig4091:233..4583+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4091:233..4583+ >mRNA_H-paniculata_contig4091.10549.1 ID=mRNA_H-paniculata_contig4091.10549.1|Name=mRNA_H-paniculata_contig4091.10549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig4091:233..4583+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |