prot_H-paniculata_contig4086.10543.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4086.10543.1
Unique Nameprot_H-paniculata_contig4086.10543.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length674
Homology
BLAST of mRNA_H-paniculata_contig4086.10543.1 vs. uniprot
Match: A0A6H5KZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ4_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 1.760e-103
Identity = 282/709 (39.77%), Postives = 346/709 (48.80%), Query Frame = 0
Query:    1 MLKSLIWGSDTPVWEEEVEER---PQQQSQDASCTESQQDPRAHLPTNRRQQPQPTTANGNHDAQRPFSSLRRTYTLARVGRLAGPLSVNDPEL-----QKQNFKTSLPDEFFALPCPI------DRW-IAFRDSVVHVHQLLRAMVAGQDYAGAARALAVLHRLHGAFDPDVYRYTATLLRVSGDHTKTMMYFRK------LVGIFLRTASNRMG-YRHTVVIQDYLAYLCDTQEYKEAVNMIQSIPFTKGRKGRGIDPSLQAYGTVLHLFASLLEHQQISLKSSPAASSS-------PSG--VKQIAGEEASPPSSLPLPPSARIPDLQDPLALIGPLRACLMENTGGGGGDGFAALNPNADAHRARALAHIKEAEKLANLATERLPWNASAAGYRAAIEAAKR-----GPASALRQLENFIERNADSVKGRALHSRLLEMDFGDSSAL-----------------------NNSSEEREAAATSPAVSAAQSEQGALGTSSVAGPAAATHLIDVVHARALRGWLEVDPLEPRGALGLAALHAQRSLHGATVGVASEEFIVKTMILQVETH--GHTRVYPPLYLQPAAAAGIDSADGSAAPPGELDGGSSSPSPTSSSYNTTRAAVALWRALADLLGPLRVRDAPVPVLSASSRRGVGVGEGGQPATTAAVATGVRVVAGEGAPPPRPGTLWDRLYGRDPPWAPTDF 648
            MLK LIWGS  P WEE+ E+    P  Q    + T S                    A   H  Q   SSLR TY + R G LAGPLSVNDP+L      +  F  S  + FF +  P       + W ++ RD+  HVH LLRA++A  DYAGAARALA LHRLH  FDPDVYRYT  LLR++GDH KT MYFRK      L G+F     +  G  R      D+LAYL D QE+ EA+++ Q   F      +  DPSL+A+G VL LF +LLEHQ  S  S  +  SS       PS      ++G +  PP          IP LQDPL+L+G LRAC ++  GGG G           + +ARAL H++ A++L   A    P +AS AGYRAA  AA       G  +ALRQL  F+ERN  SVKG  LH+RLLEM   ++                              E R+A   + A  A  +E+ A GT+          L+ V  ARALRGWLE DPLEPR  L LAALHA+ S   A VGVA   F+V  ++ Q+ET   G  R        P  A  +D+                       + +TTRAA  LW ALADLLGPLRVRD PVPV+  S                                  RPGT+WD LYG DPPWAPTDF
Sbjct:    1 MLKPLIWGSQAPEWEEDAEDEGGLPGWQRSSQNSTAS------------------AVAKQEHQPQPAGSSLRGTYDVNRKG-LAGPLSVNDPQLLEPPTHRVRFTNS--ESFFNIASPFGPPGASNTWSLSRRDAPEHVHLLLRALMAAHDYAGAARALATLHRLHSLFDPDVYRYTVALLRLAGDHQKTSMYFRKILGKRLLAGVFAPKGGSVQGSVRGRATAHDFLAYLADRQEFDEALDLSQGGSFLSHGPFKQ-DPSLKAHGAVLRLFVALLEHQACSGCSYTSDGSSCAADFPAPSAGNAAAVSGRQRPPP---------LIPGLQDPLSLVGRLRACWVDCGGGGHGG----------SRQARALEHLRYAQRLLEQAATGSPGDASIAGYRAAATAASAASEGGGMPAALRQLAAFVERNPGSVKGHRLHARLLEMSRREAQXXXXXXXXXXXXXRLSLPQEEGRRDRGQGEGRDAIGGAGAQQAG-AEKKAAGTAEEEDQDGLL-LVGVARARALRGWLEADPLEPRAVLALAALHAEGS--AAVVGVADRAFVVDGLVAQLETSCGGGPR--------PCPAPAVDARG---------------------TLHTTRAATTLWTALADLLGPLRVRDEPVPVVRQSGXXXXXXXX-------------XXXXXXXXXXXXRPGTIWDHLYGADPPWAPTDF 622          
BLAST of mRNA_H-paniculata_contig4086.10543.1 vs. uniprot
Match: D7FX89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX89_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 5.690e-49
Identity = 147/375 (39.20%), Postives = 191/375 (50.93%), Query Frame = 0
Query:    1 MLKSLIWGSDTPVWEEEVEER---PQQQSQDASCTESQQDPRAHLPTNRRQQPQPTTANGNHDAQRPFSSLRRTYTLARVGRLAGPLSVNDPELQK---QNFKTSLPDEFFALPCPI------DRW-IAFRDSVVHVHQLLRAMVAGQDYAGAARALAVLHRLHGAFDPDVYRYTATLLRVSGDHTKTMMYFRK------LVGIFLRTASNRMG-YRHTVVIQDYLAYLCDTQEYKEAVNMIQSI----------PFTKGRKGRGIDPSLQAYGTVLHLFASLLEHQQISLKSSPAASSSPSGVKQIAGEEASPPSSLPLPPSARIPDLQDPLALIGPLRACLMENTGGGGGDGFAALNPNADAHRARALAHIKE 345
            MLK LIWGS  P WEE+ E+    P  Q    + T S    + H       QPQP +           SSLR TY + R G LAGPLSVNDP+L +      + +  + FF +  P       + W ++ RD+  HVH LLRA +A  DYAGAARALA LHRLH  FDPDVYRYT  LLR++GDH KT MYFRK      L G+F     +  G  R      D+LAYL D QE+ EA+++ Q++          PF +       DPSL+A+G VL LF +LLEHQ  S ++  +  SS +                       IP LQDPL+L+G LRAC ++   G                +ARAL H+++
Sbjct:    1 MLKPLIWGSQAPEWEEDAEDEGGLPGWQRSSQNSTASAVPKQEH-------QPQPAS-----------SSLRGTYDVNRKG-LAGPLSVNDPQLLEPPTHRLRFTNSESFFNIASPFGPPGASNTWSLSRRDAPEHVHLLLRAFMAAHDYAGAARALATLHRLHSLFDPDVYRYTVALLRLAGDHQKTSMYFRKILGKRLLAGVFAPKGGSVQGSVRGRATAHDFLAYLADRQEFDEALDISQNLLQGGSFLSHGPFKQ-------DPSLKAHGAVLRLFVALLEHQVCSGRNDTSDGSSSATDAPAPXXXXXXXXXXXXXXXXLIPGLQDPLSLVGRLRACWIDCAAGAXX-----XXXXXXXRQARALEHLRD 344          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4086.10543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZZ4_9PHAE1.760e-10339.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX89_ECTSI5.690e-4939.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4086contigH-paniculata_contig4086:2208..8569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4086.10543.1mRNA_H-paniculata_contig4086.10543.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4086 2208..8839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4086.10543.1 ID=prot_H-paniculata_contig4086.10543.1|Name=mRNA_H-paniculata_contig4086.10543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=674bp
MLKSLIWGSDTPVWEEEVEERPQQQSQDASCTESQQDPRAHLPTNRRQQP
QPTTANGNHDAQRPFSSLRRTYTLARVGRLAGPLSVNDPELQKQNFKTSL
PDEFFALPCPIDRWIAFRDSVVHVHQLLRAMVAGQDYAGAARALAVLHRL
HGAFDPDVYRYTATLLRVSGDHTKTMMYFRKLVGIFLRTASNRMGYRHTV
VIQDYLAYLCDTQEYKEAVNMIQSIPFTKGRKGRGIDPSLQAYGTVLHLF
ASLLEHQQISLKSSPAASSSPSGVKQIAGEEASPPSSLPLPPSARIPDLQ
DPLALIGPLRACLMENTGGGGGDGFAALNPNADAHRARALAHIKEAEKLA
NLATERLPWNASAAGYRAAIEAAKRGPASALRQLENFIERNADSVKGRAL
HSRLLEMDFGDSSALNNSSEEREAAATSPAVSAAQSEQGALGTSSVAGPA
AATHLIDVVHARALRGWLEVDPLEPRGALGLAALHAQRSLHGATVGVASE
EFIVKTMILQVETHGHTRVYPPLYLQPAAAAGIDSADGSAAPPGELDGGS
SSPSPTSSSYNTTRAAVALWRALADLLGPLRVRDAPVPVLSASSRRGVGV
GEGGQPATTAAVATGVRVVAGEGAPPPRPGTLWDRLYGRDPPWAPTDFER
RFDDATGAFGVGVTGGAGGGTRGG
back to top