prot_H-paniculata_contig11622.1051.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11622.1051.1
Unique Nameprot_H-paniculata_contig11622.1051.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length307
Homology
BLAST of mRNA_H-paniculata_contig11622.1051.1 vs. uniprot
Match: A0A6H5LAU8_9PHAE (CXXC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU8_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.460e-32
Identity = 68/111 (61.26%), Postives = 76/111 (68.47%), Query Frame = 0
Query:  110 GGFLRPSIVLAQNPNRERTRWPARLCDRDEVEERLAQKDLDGGGKDKPVL---VVFLCEGGHHYFCWMSEVDITPMPAGLTGLGEPGHTWPIDFTAAVMWARQLSTVIVEE 217
            GG LRPSIVLA+NPNR    WPARLCDRDEVEE  A  DL+   +    L   +VFLCEGGHHYF W+SE DI PMP+G  GLG     W IDF+A VMWARQLS +   E
Sbjct:  520 GGLLRPSIVLAKNPNRGGNLWPARLCDRDEVEESFAHSDLNAEAQAHRALRALLVFLCEGGHHYFAWVSESDIFPMPSGDEGLGAEAGEWLIDFSAGVMWARQLSALQAAE 630          
BLAST of mRNA_H-paniculata_contig11622.1051.1 vs. uniprot
Match: D7G6J0_ECTSI (CXXC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J0_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.890e-19
Identity = 63/144 (43.75%), Postives = 71/144 (49.31%), Query Frame = 0
Query:   81 LEKGL-RRGGPGGGREEGDSARMATGVV------SGGGFLRPSIVLAQNPNRERTRWPARLCDRDEVEERLAQKDLDGGGKDKPVLVVFLCEGGHHYFCWMSEVDITPMPAGLTGLGEPGHTWPIDFTAAVMWARQLSTVIVEE 217
            L KGL  R GP GG++                    GG LRPSIVLA+NPNR    WPARLCDRDEVEE  A  DL+   +                     E DI PMP+G  GLG     W IDF+A VMWARQLS +   E
Sbjct:  142 LYKGLGHRKGPAGGQQAXXXXXXXXXXXXXXXXGDSGGLLRPSIVLAKNPNRGGNLWPARLCDRDEVEESFAHSDLNAEAQ---------------------ESDIFPMPSGDEGLGAEAGEWLIDFSAGVMWARQLSALQAAE 264          
BLAST of mRNA_H-paniculata_contig11622.1051.1 vs. uniprot
Match: A0A835YWT3_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWT3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.790e-8
Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0
Query:  112 FLRP--SIVLAQNPNRERTRWPARLCDRDEVEERLAQKDLDGGGKDKP-VLVVFLCEGGHHYFCWMSEVDITPMPAGLTGLGEPGHTW 196
             +RP  +I LA+NP R +  WPAR+CD+ EV+E +++K   G    K  VLVV+LC+ GHH   W+   D+TP  A  T        W
Sbjct:    4 LIRPIKTIALARNPQRRKL-WPARICDQQEVQEWISEK---GPPHSKGLVLVVYLCDEGHHVVAWVLPTDLTPYRAHRTQDARLAEEW 87          
BLAST of mRNA_H-paniculata_contig11622.1051.1 vs. uniprot
Match: A0A6H5JKB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB5_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.530e-7
Identity = 38/108 (35.19%), Postives = 52/108 (48.15%), Query Frame = 0
Query:  116 SIVLAQNPNRERTRWPARLCDRDEVEERLAQKDLDGGGKDKP--VLVVFLCEGGHHYFCWMSEVDITPM-------PAGLTGLGEPGHTWPIDFTAAVMWARQLSTVI 214
            +IVLA+   + +T WPARLC + E+ ER+   D    G D     LVVFLCEGGHH   W++   + P        P             P DFTAA  W  ++  ++
Sbjct:  597 TIVLAKCRRKSQTMWPARLCSKREMLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQP-DFTAAEAWGEEMKALV 703          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11622.1051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5LAU8_9PHAE1.460e-3261.26CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6J0_ECTSI2.890e-1943.75CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YWT3_9STRA5.790e-840.91AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5JKB5_9PHAE2.530e-735.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11622contigH-paniculata_contig11622:223..6526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11622.1051.1mRNA_H-paniculata_contig11622.1051.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11622 222..6526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11622.1051.1 ID=prot_H-paniculata_contig11622.1051.1|Name=mRNA_H-paniculata_contig11622.1051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp
GGGGGSGSVSSSCTTSGGGGGGGTTKKSKKTTILKAILSSPAAAAAADTT
TRHSIGSPAVVSTTTAADDSPCNTMTVRHLLEKGLRRGGPGGGREEGDSA
RMATGVVSGGGFLRPSIVLAQNPNRERTRWPARLCDRDEVEERLAQKDLD
GGGKDKPVLVVFLCEGGHHYFCWMSEVDITPMPAGLTGLGEPGHTWPIDF
TAAVMWARQLSTVIVEEEEEEQLLLNKHSHSCSPAPQLSLSSPSSSSSAS
KKNAAHLSSKSPRSAAISPASPTRGGGSGRGRGGRSGGGRGRGGRESKGR
GSESGVG
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