mRNA_H-paniculata_contig40656.10504.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 142 bits (358), Expect = 1.490e-34 Identity = 109/288 (37.85%), Postives = 156/288 (54.17%), Query Frame = -1
Query: 6 NTYVNQATLSMSEPPEVLEEESPDIRTGK*EEDETPSMEGIWHGD-----LTSEAQRTREVLIDVMKEKGFGSVSSIVERVARLLDPRYKLCSEQVCRDGGERLKERCLKAIWENTSNLFVGPASTHLVAPVPGPGQEETDPPPAAAKKPKLSKFHQRRQDRLKASPSVTEGGGG----SSPVKRPQLVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAPTCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 842
+T+V QA + E E+L E++ IR P EGI D LT+EAQ EVL + M+EKG GS VER++ L+DPR K +G L+++ + + VGPA+ AP P P DP A KK KLS+ +RR R+ A+ + + G S R L++ E+ Y+AE P D D F++LGY R+ + V+ + + A+ +L+ IARLY I +TSCQAER+FS L+ LIG LR ++ P+KVE+MMF+RLN
Sbjct: 521 DTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPP-EGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATA---APAPAPVMN-LDPVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDS-VSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLN 802
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.050e-33 Identity = 107/288 (37.15%), Postives = 156/288 (54.17%), Query Frame = -1
Query: 6 NTYVNQATLSMSEPPEVLEEESPDIRTGK*EEDETPSMEGIWHGD-----LTSEAQRTREVLIDVMKEKGFGSVSSIVERVARLLDPRYKLCSEQVCRDGGERLKERCLKAIWENTSNLFVGPASTHLVAPVPGPGQEETDPPPAAAKKPKLSKFHQRRQDRLKASPSVTEGGGG----SSPVKRPQLVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAPTCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 842
+T+V QA + E E+L E++ IR P EGI D LT+EAQ EVL + M+EKG GS VER++ L+DPR + +G L+++ + + VGPA T AP P + +P P KK KLS+ +RR R+ A+ + + G S R L++ E+ Y+AE P D D F++LGY R+ + V+ + + A+ +L+ IARLY I +TSCQAER+FS L+ LIG LR ++ P+KVE+MMF+RLN
Sbjct: 326 DTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPP-EGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPA-TAAPAPAPVMNLDRVEPAP---KKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDS-VSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLN 607
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.130e-33 Identity = 101/287 (35.19%), Postives = 151/287 (52.61%), Query Frame = -1
Query: 6 NTYVNQATLSMSEPPEVLEEESPDIRT-GK*EEDETPSMEGIWHGDLTSEAQRTREVLIDVMKEKGFGSVSSIVERVARLLDPRYKLCSEQVCRDGGERLKERCL---KAIWENTSNLFVGPASTHLVAPVPGPGQEETDPPPAAAKKPKLSKFHQRRQDRLKASPSVTEGGGGSSPV---KRPQLVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAP-TCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 842
+T+++Q +M E E+ + IR + D++ E I DL +E + REV++ M++K G+ +ER+ LLDPR K CS++ +G LK + K++ + + +G AS+ P P K LS +RR RL S + + G + V +R +V+ EL Y+AE P +++ FSLL + R+ P TC E + HL+LIARL+H I STSCQAER+FS L+ LIG LR S+ P KVE++MFLRLN
Sbjct: 183 DTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASSXXXXXXXXXXXXXNQPAPKKQKV--LSDLEERRLQRLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGLP----HLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLN 463
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 137 bits (346), Expect = 5.920e-33 Identity = 101/287 (35.19%), Postives = 151/287 (52.61%), Query Frame = -1
Query: 6 NTYVNQATLSMSEPPEVLEEESPDIRT-GK*EEDETPSMEGIWHGDLTSEAQRTREVLIDVMKEKGFGSVSSIVERVARLLDPRYKLCSEQVCRDGGERLKERCL---KAIWENTSNLFVGPASTHLVAPVPGPGQEETDPPPAAAKKPKLSKFHQRRQDRLKASPSVTEGGGGSSPV---KRPQLVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAP-TCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 842
+T+++Q +M E E+ + IR + D++ E I DL +E + REV++ M++K G+ +ER+ LLDPR K CS++ +G LK + K++ + + +G AS+ P P K LS +RR RL S + + G + V +R +V+ EL Y+AE P +++ FSLL + R+ P TC E + HL+LIARL+H I STSCQAER+FS L+ LIG LR S+ P KVE++MFLRLN
Sbjct: 511 DTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASSXXXXXXXXXXXXXNQPAPKKQKV--LSDLEERRLQRLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGLP----HLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLN 791
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 105 bits (262), Expect = 7.130e-22 Identity = 85/242 (35.12%), Postives = 124/242 (51.24%), Query Frame = -1
Query: 6 LTSEAQRTREVLIDVMKEKGFGSVSSIVERVARLLDPRYKLCSEQVCRDGGERLK---ERCLKAIWENTSNLFVGPASTHLVAPVPGPGQEETDPPPAAAKKPKLSKFHQRRQDRLKASPSVTEGGGGSSPVK-----RPQLVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAPTCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 707
LT EAQ +VL ++M EKG G VER++ LLDPR K + R+G LK E LKA + F ++ AP P + + PA KK S+ G++ + R L++ E+ Y+AEQP D D F+LLG+ R+ + V+ A+ + A+ +L+ IARL+ I +TSCQAER+FS L+ LIGDL ++ +VE+MM +RLN
Sbjct: 369 LTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAF----TGKFAQESAPSTPAPAPVVNVDTAE--PARKKKXPTSRLEXXXXXXXXXXXXXXXXXXGTTDPQAAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDS-VSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLN 603
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.470e-18 Identity = 77/225 (34.22%), Postives = 107/225 (47.56%), Query Frame = -1
Query: 57 DLTSEAQRTREVLIDVMKEKGFGSVSSIVERVARLLDPRYKLCSEQVCRDGGERLKERCLKAIWENTSNLFVGPASTHLV--APVPGPGQEETDPPPAAAKKPKLSKFHQRRQDRLKASPSVTEGGGGSSPVK-----RPQLVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAPTCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLR 710
DLT EAQ +VL++VM EKG G VER++ LLDPR K + R+G LK + E F+G + P P P PA K S+ + K R L++ E+ Y+AEQP D D F+ LG+ R+ + V+ A+ + A+ +L+ IARL+ I +TSCQAER+FS L+ LIGDLR
Sbjct: 400 DLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQA-----EADLKAFIGKFAQESAPSTPAPAPVVNVDTAEPARKKXXXTSRLXXXXXXXXXXXXXXXXXXXXXTDPKAAGAGRRVLIEREMLVYLAEQPQVDVDDFNPLGFWNRRGTDS-VSAATGKVSSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLR 618
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 1.310e-16 Identity = 73/241 (30.29%), Postives = 119/241 (49.38%), Query Frame = -1
Query: 6 IWHGDLTSEAQRTREVLIDVMKEKGFGSVSSIVERVARLLDPRYKLCSEQVCRDGGERLKERCLKAIWENTSNLFVGPASTHLVAPVPGPGQEETDPPPAAAKKPKLSKFHQRRQDRLKASPSVTEGGGGSSPVKRPQLVKE--ELTAYMAEQP*KDDDRFSLLGY*ARQDAPTCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 722
+ H +L++ A +V+ + K++ G+ VE +A DPR K + VC GGE +E+ L+A+ + NL V A VP P PPP + + + +R+ +++ + + P ++ KE E T A P KD + +LG+ +P H + V A+ LS++AR+Y I STSCQ+ER FS L + +LR+++ P +VE +MFLR N
Sbjct: 23 VRHAELSNVAYTAVKVISEEFKKRNIGTPVEDVEFLALFFDPRSKDFGKGVC--GGEGGQEKALEALSTVSMNL-VDTVEPGGAADVPVPAA--ATPPPEKRARVATTAYERRQARKVQEAAAARTSARRDQPSVTDRVQKEVDEYTKLPAAVPAKD---YDVLGFWRDAGSPRLDPHGN--VVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSN 253
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.600e-13 Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = -1
Query: 6 LVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAPTCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 308
L++ E+ Y+AEQP D D F+L+G+ R+ + V A+ + A +L+ IARL+ I +TSCQAER+FS L+ LIG+LR ++ P +VE+MM +RLN
Sbjct: 400 LIEREMLVYLAEQPQLDVDGFNLIGFWNRRGTDS-VRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLN 499
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 4.640e-7 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = -1
Query: 6 PSVTEGGGGSSPVKRPQLVKEELTAYMAEQP*KDDDRFSLLGY*ARQDAPTCVTHASQEAVVLAKSLHLSLIARLYHPIASTSCQAERSFSTLSLLIGDLRRSLSPTKVEQMMFLRLN 359
PSVT+ R Q +E T A P KD + +LG+ +P H + V A+ LS++AR+Y I STSCQ+ER FS L + +LR+++ P +VE +MFLR N
Sbjct: 152 PSVTD---------RVQKEVDEYTKLPAAVPAKD---YDVLGFWRDAGSPRLDPHGN--VVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSN 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40656.10504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40656.10504.1 >prot_H-paniculata_contig40656.10504.1 ID=prot_H-paniculata_contig40656.10504.1|Name=mRNA_H-paniculata_contig40656.10504.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp MVQAQEHHLLNLRGRQAPPQIADEEGKRREAPFRLTAGGSNGVVEAGYERback to top mRNA from alignment at H-paniculata_contig40656:114..961+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40656.10504.1 ID=mRNA_H-paniculata_contig40656.10504.1|Name=mRNA_H-paniculata_contig40656.10504.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=848bp|location=Sequence derived from alignment at H-paniculata_contig40656:114..961+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40656:114..961+ >mRNA_H-paniculata_contig40656.10504.1 ID=mRNA_H-paniculata_contig40656.10504.1|Name=mRNA_H-paniculata_contig40656.10504.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1626bp|location=Sequence derived from alignment at H-paniculata_contig40656:114..961+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |