mRNA_H-paniculata_contig40653.10503.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig40653.10503.1
Unique NamemRNA_H-paniculata_contig40653.10503.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 239 bits (610), Expect = 1.020e-69
Identity = 137/361 (37.95%), Postives = 215/361 (59.56%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRC-LRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGRR-EKVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIY----CFDESLGAVLSNVGAGVQENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            P + ++AL GP+A +W  AM++E  +L E+ +WE      LP  RKA   KW+FK K   DGS+ R+KARLVAQGFSQ  G D+ +T +PV R  ++RTV +L+ +   +L  MD+  A+LN  +E+E+++K P    +  ++   + C L KSLY LK S R WN+ LD+ L  IG  ++ +DPC+Y   +DG     +VA++VDD ++AG+  EK+ + K +++ RF++KD+G L  +LG++V   + +  + I Q  Y   ++K Y    C        LS+      E+S  +F N  E++  VGSL+Y S+ TRPDI +AV+  A+ + +P  E +   KRI RYL    + G+ +
Sbjct:  146 PTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE--HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVI--QEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSE-LF-NKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY 495          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 231 bits (589), Expect = 5.640e-68
Identity = 135/345 (39.13%), Postives = 200/345 (57.97%), Query Frame = 1
Query:   22 LKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCLRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIA-GRREKVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDESLGAVLS-NVGAGVQENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPD 1050
            +KGP+A  W+AAM++E  +L ENG W+  +   LP GRKA   KWIFKRKL EDG+V RYKARLVAQGF+Q  G D+ +  APV R  T R + ++A++    ++  D+  AYLN  +EE +F++ PP     +RD   V  L+KSLY LK +   WN   D  L  +   +S  DPCLY  R+  G T   + +YVDD VIA    E+ +E    L+R F++  LG +S  LGI++  +R     ++SQ  YI+++L+ +  +++  +    + G   Q+  + +  N+ +Y  ++GSL+Y +  TRPDIA +V    R    P + D+   KRI RYL    D
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYT--YLVIYVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKI--NRNEKGFSLSQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMD 336          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 234 bits (597), Expect = 6.080e-68
Identity = 143/360 (39.72%), Postives = 215/360 (59.72%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCLRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGRRE-KVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDESLGAVLS-NVGAGVQ---ENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            P++  +AL  P   KW  AME+E  +L  N +W   N   LP  RKA  +KW+F+ K   DG+V  +KARLVAQGFSQ  G+D+ +T +PVAR  ++RTV +LAA+H  +L  MD+  A+LN  ++EE+++K  PE  +       V  LR+S+  LK S R WN+ LD  L  +G  ++T DPC+Y  +++GGE   ++AVYVDD ++AG+ + K++E K  L+ +F+MKD+G     LG++V     +  I I Q  Y + VL+ +  + S  A    N G  ++   ++S+ +  +   Y+  VG L+Y ST TRPDIAYAV   AR +  P  E +   KRI RYL+   D+G+ +
Sbjct:  130 PRTVKEALSSPQKTKWVKAMEKEMESLKTNEVW---NLVELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMK-QPEGFIDKGKEHLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIY-VKEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRV--DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLY 481          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 239 bits (610), Expect = 3.580e-67
Identity = 140/361 (38.78%), Postives = 215/361 (59.56%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCLRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDI-LVAVYVDDRVIAGRR-EKVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIY----CFDESLGAVLSNVGAGVQENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            P + ++AL GP+A +W  AM++E  +L E+ +WE      LP  RKA   KW+FK K   DGS+ R+KARLVAQGFSQ  G D+ +T +PV R   +RTV +L+ +   +L  MD+  A+LN  +E+E+++K P    +  ++   V  L KSLY LK S R WN+ LD+ L  IG  ++ +DPC+Y   +DG   DI +VA++VDD ++AG+  EK+ + K +++ RF++KD+G L  +LG++V   + +  + I Q  Y   ++K Y    C        LS+      E+S  +F N  EY+  VGSL+Y S+ TRPDI +AV+  A+ + +P  E +   KRI RYL    + G+ +
Sbjct:  760 PTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---DIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVI--QEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSE-LF-NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY 1109          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: I1PQ20_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1PQ20_ORYGL)

HSP 1 Score: 223 bits (569), Expect = 6.960e-65
Identity = 130/355 (36.62%), Postives = 208/355 (58.59%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWE-SENP-GSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCLRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGRR-EKVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDESLGAVLSNVGAGVQENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLG 1056
            PKS ++A   PDA  W+ A+  E  +++ NG WE +E P G  P G      KW+FK+KL+ DG++ +YKARLVA+G++Q EGEDFF T +PVAR++T+R + SLAA H   +  MD+  A+LN  ++EE+++  P    +  ++    + L KSLY LK + + W+   D  L   G   +  D C+Y+ R  GGE  +++ +YVDD +I G   + ++E K  LS+ F MKDLG    +L I++   R    IT+ Q +Y+ ++L  + +  S  +      + +   ++ I  N  EY  ++GSLMY ++ TRPDI++AV + +R T +P  + +   +R+ RYL    +LG
Sbjct:  184 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVG-----CKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLL-KSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY-RHGGGEG-VILCLYVDDILIFGTNLDVINEVKSFLSQNFDMKDLGVADVILNIKLI--RGENGITLLQSHYVEKILNRFGYINSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELG 528          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 228 bits (580), Expect = 1.080e-64
Identity = 137/363 (37.74%), Postives = 207/363 (57.02%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCLRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGRREK-VDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDESLGAVLSNVGAGVQENSRGIFGNST-------EYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            PK+    L  PD  KW+ AME+E  +L  N +W   N   LP GRKA  +KW+FK K+  DG+  R+KARLVAQGFSQ  G D+ +T +PV R  ++RT+ + A ++  +L  MD+  A+LN  ++EE++++ P    +  ++   V  L +S+Y LK S R WN  LD+ L  +G  ++T DPC+Y A    GE   ++AVYVDD ++AG  +K + E K  L++ F +KD+G L+  LG+++      G I + Q  Y   VLK +  + S       V   V  N++ +  +         +++  VGSL+Y ST TRPDIAYAV+  AR    P ++ +   KRI RYL    +LG+ +
Sbjct:  237 PKTVKDVLSSPDKAKWKEAMEKEMESLYANNVW---NLVELPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKE-HLVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAAT--GEM-FIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENS-----KPVSTPVDINTKLVKHSDDSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLY 587          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 231 bits (590), Expect = 2.050e-64
Identity = 147/369 (39.84%), Postives = 206/369 (55.83%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRC--LRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGR-REKVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDESLGAVLSNVGAGVQENSRGIFGNST-----------EYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            P++  +AL GPD++ WR A+++E  +  EN + E      +P G K   +K + K K   +G++ RYK R+VA+GF+Q EG D+ +  APVA + ++R + +LAA+HD EL+ MD+  AYLN  + E+L++ LPP+      DIP   C  L+KSLY LK + R WN T D  L  +G  R   + CLY  R +GG+   LV VYVDD ++A   R  +DE K  L+  F+M+DLG  S VLGI++R DR    I +SQ  YI  VLK  C  E    V + +    +  +     N T            Y  +VGSLMYA  GTRPDIAYA     R + +P R  +   KR+ RYL    DL + F
Sbjct: 1003 PRTIKEALNGPDSKHWREALDDELNSFEENDVKEVV---PIPEGVKPITSKIVPKIKFDANGNIERYKIRIVARGFTQREGVDYQEVFAPVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-LPPD----GVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLK-RCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQF 1361          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: Q53NX4_ORYSJ (Retrotransposon protein, putative, Ty1-copia sub-class n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q53NX4_ORYSJ)

HSP 1 Score: 226 bits (576), Expect = 2.290e-64
Identity = 131/358 (36.59%), Postives = 211/358 (58.94%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWE-SENP-GSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCLRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGRR-EKVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDESLGAVLSNVGAGVQENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            PKS ++A   PDA  W+ A+  E  +++ NG WE +E P G  P G      KW+FK+KL+ DG++ +YKARLVA+G++Q EGEDFF T +PVAR++T+R + SLAA H   +  MD+  A+LN  ++EE+++  P    +  ++    + L KSLY LK + + W+   D  L   G   +  D C+Y+ R  GGE  +++ +YVDD +I G   E ++E K  LS+ F MKDLG    +L I++   R    IT+ Q +Y+ ++L  + + +S  +      + +   ++ I  N  EY  ++GSLMY ++ TRPDI++AV + +R T +P  + +   +R+ RYL    +LG+ +
Sbjct:  184 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVG-----CKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLL-KSLYGLKQAPKQWHEKFDKTLTSAGFVVNEADKCVYY-RHGGGEG-VILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLI--RGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHY 531          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 226 bits (575), Expect = 2.470e-64
Identity = 138/341 (40.47%), Postives = 207/341 (60.70%), Query Frame = 1
Query:   58 MEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCLRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGRRE-KVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDESLGAVLS-NVGAGVQ---ENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            ME+E  +L  N +W   N   LP  RKA  +KW+F+ K   DG+V  +KARLVAQGFSQ  G+D+ +T +PVAR  ++RTV +LAA+H  +L  MD+  A+LN  ++EE+++K   E  +       V  LR+S+Y LK S R WN+ LD  L  +G  ++T DPC+Y  +++GGE   ++AVYVDD ++AG+ + K++E K  L+ +F+MKD+G L   LG++V     +  I I Q  Y + VL+ +  + S  A    N G  ++   ++S+ +  +   Y+  VG L+Y ST TRPDIAYAV   AR + DP  E +   KRI RYL+   D+G+ +
Sbjct:    1 MEKEMESLKTNEVW---NLVELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMK-QTEGFIEKGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIY-VKEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRV--DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLY 333          
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 230 bits (586), Expect = 6.830e-64
Identity = 142/361 (39.34%), Postives = 205/361 (56.79%), Query Frame = 1
Query:    1 PKSTAKALKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRC-LRKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILVAVYVDDRVIAGRREKV-DEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNGTITISQCNYIREVLKIYCFDES--LGAVLS-NVGAGVQ-ENSRGIFGNSTEYRGMVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPDLGITF 1065
            P+S A+A   P+  +W  A++ E+  L   G WE ++   LP  R A   KW+F+RK  ++G V +YKARLVAQG+SQ+ G DF +T APV R+ ++R + +LA  +++E+  MD+  AYLN  ++EE++++ P      S  I    C LRK+LY LK S R WN  L   L  +G  R   DPC+Y      GE  I+  V+VDD ++     K+ +E K +L   F + DLG   +++GIE+  DR  G I ISQ +YI  +LK Y  + +  +G  L  NV    + EN       +  Y  MVGSLMYA+ GTRPDI+YAV   ++ T  P    +   KR+ RYL+   DL IT+
Sbjct:  907 PRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRI----CRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIIT-VWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITY 1259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40653.10503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9HZ03_PARCT1.020e-6937.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GIT5_AEDAL5.640e-6839.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7JEY7_PARCT6.080e-6839.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HEL0_PARCT3.580e-6738.78Retrovirus-related Pol poly from transposon TNT 1-... [more]
I1PQ20_ORYGL6.960e-6536.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A498M2F0_LABRO1.080e-6437.74Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A409WVI7_9AGAR2.050e-6439.84Integrase catalytic domain-containing protein (Fra... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40653contigH-paniculata_contig40653:54..1198 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score234.6
Seed ortholog evalue7.3e-59
Seed eggNOG ortholog164328.Phyra85518
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1065
Cds size1065
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930243.647957-CDS-H-paniculata_contig40653:53..3061622930243.647957-CDS-H-paniculata_contig40653:53..306Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40653 54..306 -
1691481207.307817-CDS-H-paniculata_contig40653:53..3061691481207.307817-CDS-H-paniculata_contig40653:53..306Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40653 54..306 -
1622930243.6702013-CDS-H-paniculata_contig40653:386..11981622930243.6702013-CDS-H-paniculata_contig40653:386..1198Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40653 387..1198 -
1691481207.31955-CDS-H-paniculata_contig40653:386..11981691481207.31955-CDS-H-paniculata_contig40653:386..1198Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40653 387..1198 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40653.10503.1prot_H-paniculata_contig40653.10503.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig40653 54..1198 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig40653.10503.1

>prot_H-paniculata_contig40653.10503.1 ID=prot_H-paniculata_contig40653.10503.1|Name=mRNA_H-paniculata_contig40653.10503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp
PKSTAKALKGPDARKWRAAMEEEWGALVENGIWESENPGSLPAGRKATRT
KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTV
FSLAAEHDFELEGMDIDVAYLNTPVEEELFVKLPPEVSLSSRDIPFVRCL
RKSLYYLKHSDRNWNNTLDDFLVGIGLDRSTTDPCLYFARDDGGETDILV
AVYVDDRVIAGRREKVDEFKHNLSRRFRMKDLGSLSRVLGIEVRCDRPNG
TITISQCNYIREVLKIYCFDESLGAVLSNVGAGVQENSRGIFGNSTEYRG
MVGSLMYASTGTRPDIAYAVHQAARRTEDPCREDFGTCKRICRYLSAVPD
LGITF
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mRNA from alignment at H-paniculata_contig40653:54..1198-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig40653.10503.1 ID=mRNA_H-paniculata_contig40653.10503.1|Name=mRNA_H-paniculata_contig40653.10503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1145bp|location=Sequence derived from alignment at H-paniculata_contig40653:54..1198- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGAAATCCACGGCAAAAGCATTAAAGGGTCCAGACGCGAGAAAATGGCG CGCGGCAATGGAAGAGGAATGGGGGGCGTTGGTGGAAAATGGAATATGGG AAAGCGAAAACCCGGGGAGTTTACCGGCAGGGCGGAAGGCGACTCGTACA AAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTAGCGCGCTA CAAAGCGCGACTGGTGGCTCAAGGTTTTTCACAGGTGGAGGGTGAAGATT TCTTTAAAACGAGTGCCCCCGTAGCTCGCATGTCGACGTTACGTACTGTT TTTAGTCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGACATAGA TGTGGCGTATTTGAACACCCCGGTAGAAGAAGAGCTGTTTGTTAAGCTAC CCCCCGAGGTTTCCCTTTCCTCGCGAGACATACCGTTTGTGCGCTGCCTG CGTAAAAGCCTGTATTACCTCAAGCACAGCGACCGCAACTGGAATAACAC TCTTGACGATTTTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGACC CATGCTTGTACTTTGCTCGCGACGATGGGGGAGAGACAGACATTCTGGTT GCCGTGTATGTTGACGACCGGGTCATTGCTGGCCGTCGCGAGAAAGTAGA CGAGTTCAAGCATAACTTAAGTAGGCGTTTTAGGATGAAAGACTTGGGCT CTCTCTCGCGCGTGTTGGGAATAGAAGTACGATGTGACCGCCCTAATGGT ACCATAACCATCTCGCAGTGTAACTACATCCGCGAGGTACTAAAAATATA CTGTTTTGACGAGTGTTGAAGGTACCCACCTCTGTAGAGGGAAAAGTGAA GGTTTCGGCACCCGAGTCGGCCGACAAGCCCTCCGAACCGAGGTCACTTG GAGCTGTACTGTCGAACGTAGGCGCAGGAGTACAAGAAAACAGCCGCGGG ATTTTCGGCAATTCGACTGAATATAGAGGCATGGTAGGATCACTCATGTA CGCCTCGACAGGAACTAGACCTGATATAGCATACGCGGTACACCAAGCAG CACGTCGTACAGAGGACCCATGTCGGGAAGACTTCGGTACATGCAAGCGC ATTTGTCGTTATCTCAGTGCTGTGCCTGACCTCGGCATTACGTTC
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Coding sequence (CDS) from alignment at H-paniculata_contig40653:54..1198-

>mRNA_H-paniculata_contig40653.10503.1 ID=mRNA_H-paniculata_contig40653.10503.1|Name=mRNA_H-paniculata_contig40653.10503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig40653:54..1198- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGAAATCCACGGCAAAAGCATTAAAGGGTCCAGACGCGAGAAAATGGCG
CGCGGCAATGGAAGAGGAATGGGGGGCGTTGGTGGAAAATGGAATATGGG
AAAGCGAAAACCCGGGGAGTTTACCGGCAGGGCGGAAGGCGACTCGTACA
AAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTAGCGCGCTA
CAAAGCGCGACTGGTGGCTCAAGGTTTTTCACAGGTGGAGGGTGAAGATT
TCTTTAAAACGAGTGCCCCCGTAGCTCGCATGTCGACGTTACGTACTGTT
TTTAGTCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGACATAGA
TGTGGCGTATTTGAACACCCCGGTAGAAGAAGAGCTGTTTGTTAAGCTAC
CCCCCGAGGTTTCCCTTTCCTCGCGAGACATACCGTTTGTGCGCTGCCTG
CGTAAAAGCCTGTATTACCTCAAGCACAGCGACCGCAACTGGAATAACAC
TCTTGACGATTTTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGACC
CATGCTTGTACTTTGCTCGCGACGATGGGGGAGAGACAGACATTCTGGTT
GCCGTGTATGTTGACGACCGGGTCATTGCTGGCCGTCGCGAGAAAGTAGA
CGAGTTCAAGCATAACTTAAGTAGGCGTTTTAGGATGAAAGACTTGGGCT
CTCTCTCGCGCGTGTTGGGAATAGAAGTACGATGTGACCGCCCTAATGGT
ACCATAACCATCTCGCAGTGTAACTACATCCGCGAGGTACTAAAAATATA
CTGTTTTGACGACCGAAATCCACGGCAAAAGCATTAAAGGGTCCAGACGC
GAGAAAATGGCGCGCGGCAATGGAAGAGGAATGGGGGGCGTTGGTGGAAA
ATGGAATATGGGAAAGCGAAAACCCGGGGAGTTTACCGGCAGGGCGGAAG
GCGACTCGTACAAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAG
CGTAGCGCGCTACAAAGCGCGACTGGTGGCTCAAGGTTTTTCACAGGTGG
AGGGTGAAGATTTCTTTAAAACGAGTGCCCCCGTAGCTCGCATGTCGACG
TTACGTACTGTTTTTAGTCTGGCCGCCGAACATGATTTCGAATTAGAAGG
CATGGACATAGATGTGGCGTATTTGAACACCCCGGTAGAAGAAGAGCTGT
TTGTTAAGCTACCCCCCGAGGTTTCCCTTTCCTCGCGAGACATACCGTTT
GTGCGCTGCCTGCGTAAAAGCCTGTATTACCTCAAGCACAGCGACCGCAA
CTGGAATAACACTCTTGACGATTTTCTTGTTGGGATAGGACTCGACCGTT
CCACTACCGACCCATGCTTGTACTTTGCTCGCGACGATGGGGGAGAGACA
GACATTCTGGTTGCCGTGTATGTTGACGACCGGGTCATTGCTGGCCGTCG
CGAGAAAGTAGACGAGTTCAAGCATAACTTAAGTAGGCGTTTTAGGATGA
AAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGATGTGAC
CGCCCTAATGGTACCATAACCATCTCGCAGTGTAACTACATCCGCGAGGT
ACTAAAAATATACTGTTTTGACGAGTCACTTGGAGCTGTACTGTCGAACG
TAGGCGCAGGAGTACAAGAAAACAGCCGCGGGATTTTCGGCAATTCGACT
GAATATAGAGGCATGGTAGGATCACTCATGTACGCCTCGACAGGAACTAG
ACCTGATATAGCATACGCGGTACACCAAGCAGCACGTCGTACAGAGGACC
CATGTCGGGAAGACTTCGGTACATGCAAGCGCATTTGTCGTTATCTCAGT
GCTGTGCCTGACCTCGGCATTACGTTCGTCACTTGGAGCTGTACTGTCGA
ACGTAGGCGCAGGAGTACAAGAAAACAGCCGCGGGATTTTCGGCAATTCG
ACTGAATATAGAGGCATGGTAGGATCACTCATGTACGCCTCGACAGGAAC
TAGACCTGATATAGCATACGCGGTACACCAAGCAGCACGTCGTACAGAGG
ACCCATGTCGGGAAGACTTCGGTACATGCAAGCGCATTTGTCGTTATCTC
AGTGCTGTGCCTGACCTCGGCATTACGTTC
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