mRNA_H-paniculata_contig4053.10483.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4053.10483.1
Unique NamemRNA_H-paniculata_contig4053.10483.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A6H5LNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNH0_9PHAE)

HSP 1 Score: 391 bits (1005), Expect = 7.680e-126
Identity = 220/423 (52.01%), Postives = 264/423 (62.41%), Query Frame = 1
Query:  109 PTWVVKPAANSNCGFGIQVCCSKK---------------------------------EVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSAS--AGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVI-GSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIE-----------------------------------VNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRKHSSTSATDGGRSEEIGQIARTRCGFSRVYPVLK 1164
            PTWVVKPAANSNCGFGIQVCCS++                                 +VL +VD    +AGRSGW+VQRYIERPLLVRGRKFDIR+FVL+VADPSTR+WR RS        PR  A  G+   S G K  +  +  +++      +  +P+ +   GS   G         P P+ AW H+DAYVR SSV+Y+N+P KVKDRFVHLTN+AVQR+S  YGQ EPGNKLTL DLQ WLDGD S HKG A GWVE TLRPRMH +VA SVAAA+ AGINR+GRPYAFELLGYDFMVDD+LRV+LIE                                   VNSNPCLEF CP+L+ +IVRVIDDTL++ALD +FRPPEKHR  ++ +A  GG +E  G       G+S VYP ++
Sbjct:  416 PTWVVKPAANSNCGFGIQVCCSRELLPSNISESVTAASSANRCPLGLPRPPDFLASQDVLGIVDATDNKAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADPSTRAWRRRSKPFRQQQTPRGHASKGTARTSSGTKSPLSGKVGSVE------KQGEPKAAPANGSSVFGXXXXXXXXXPCPLRAWCHQDAYVRTSSVRYTNHPSKVKDRFVHLTNNAVQRQSPSYGQDEPGNKLTLADLQDWLDGDGSTHKGKAFGWVEQTLRPRMHSMVATSVAAASQAGINRRGRPYAFELLGYDFMVDDDLRVYLIEKEAGVNIIREPRVWSLAYLPIVGALQTLIRPISTQVNSNPCLEFVCPLLQGMIVRVIDDTLSIALDSVFRPPEKHR--TAAAAGLGGNAEAAG------AGYSLVYPAVQ 824          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: D8LIE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE2_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 1.570e-125
Identity = 201/331 (60.73%), Postives = 239/331 (72.21%), Query Frame = 1
Query:  181 EVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSA--SAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRKHSSTSATDGGRSEEIGQIARTRCGFSRVYPVLKQ 1167
            +VL +VD    +AGRSGW+VQRYIERPLLVRGRKFDIR+FVL+VADPSTRSWR RS        PR  A  G+  +S   +  + E+  +++      R         GS   G         P P+ AW H+DAYVR SSV+YSN+P KVKDRF+HLTN+AVQRRS  YG  EPGNKLTL DLQ WLDGDES HKG A GWVE TLRPRMH +VA SVAAA+ AGINR+GRPYAFELLGYDFMVDD+LRV+LIEVNSNPCLEF CP+L+ +IVRVIDDTL++ALD +FRPPEKHR  ++ +A  GG +E  G       G+S VYPV++Q
Sbjct:  280 DVLGIVDATDNKAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADPSTRSWRRRSKPFQQQQTPRGHASKGTARVSSDSESQLSEKAGSVEE-----RGEPKAAPANGSSVFGXXXXXXXXXPCPLRAWCHQDAYVRTSSVRYSNHPSKVKDRFIHLTNNAVQRRSPSYGHDEPGNKLTLADLQDWLDGDESIHKGNACGWVEQTLRPRMHSMVATSVAAASQAGINRRGRPYAFELLGYDFMVDDDLRVYLIEVNSNPCLEFVCPLLQGMIVRVIDDTLSIALDSVFRPPEKHR--TAAAAGLGGNAEAAG------AGYSLVYPVVQQ 597          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A7S3US62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US62_HETAK)

HSP 1 Score: 198 bits (503), Expect = 5.230e-56
Identity = 122/326 (37.42%), Postives = 170/326 (52.15%), Query Frame = 1
Query:  115 WVVKPAANSNCGFGIQVCCSKKEVLDVVDQ--RGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRKHSSTSAT 1086
            W+VKPA+ SN G GI+V    +EVL +VD+  + G   R GWIVQRY+  PLLVRGRKFD+R +VLLVA P                                            GL                                 A   R+ YVR SS ++    +++ D+F+HLTNDAVQ +   YG+ E GNK++ ++ QA++D     + G A  +VE+ + P + EL  +SV A A   IN+  R   FELLGYDFM+DDN ++ LIEVNSNPCLEF+ PMLE+ I  ++ + + +A+D IF PP+K+++   T  T
Sbjct:  105 WIVKPASMSNRGMGIEVKPGGEEVLALVDRPLKSGDRRRFGWIVQRYMMNPLLVRGRKFDVRCWVLLVARPXXXXX---------------------------XXXXXXXXXRRPGL--------------------------------AAHLFREGYVRTSSARFDARRDRLGDKFIHLTNDAVQNKGKDYGKYEAGNKMSFEEFQAYID---ETYDGKA-NYVEEHMLPGIKELARLSVEAVALE-INKSRRKCCFELLGYDFMIDDNFQISLIEVNSNPCLEFSSPMLEDYITNLLSNVIEIAVDSIFLPPKKYQEQYHTGRT 366          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A7S3ZJX7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJX7_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.200e-49
Identity = 120/329 (36.47%), Postives = 159/329 (48.33%), Query Frame = 1
Query:   79 SGEREGGRGAPTWVVKPAANSNCGFGIQVCCSKKEVLDVVDQRGGRAGR-SGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRD-AYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLE-FACPMLENIIVRVIDDTLTVALDPIFRPPEK 1056
            S E +  R    W++KPA+ SN GFGI+V     E+  +V     +  R  GW+ Q+YIERPLL+ GRKFDIR F LLV D   R                                                                          I A++HR  +YVR SS KYS  P+ +  + VHL ND VQ +   YG+ E GNKL L D    +D          A W+E+TL PRM  ++  ++ AA A  +N + R   FELLG+DFM+D +LRV LIE+NSNPCLE ++CP+LE +I +++DD L V LD I  PP K
Sbjct:  168 STEEQEARATNLWILKPASMSNRGFGIRVANDLAEIEAIVSTEARKDARCGGWVCQKYIERPLLIDGRKFDIRAFCLLVTDRKGR--------------------------------------------------------------------------IQAYAHRSCSYVRTSSTKYSLKPQDLAKKGVHLVNDGVQNKEESYGKFEAGNKLALADFAQRVD--------APANWLEETLIPRMEAIMRYTIDAAHAR-LNPKKRQACFELLGFDFMLDADLRVDLIEINSNPCLETWSCPLLEGLIPKLVDDVLRVGLDQILPPPSK 413          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A7S1GB26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GB26_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.410e-46
Identity = 117/323 (36.22%), Postives = 155/323 (47.99%), Query Frame = 1
Query:  115 WVVKPAANSNCGFGIQVCCSKKEVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRKHSSTSA 1083
            W++KPA  +N G GI V  + + V D+V  R G A +  WIVQRY+E PLLVRGRKFDIR FVL+ A    R                                                                          I    +   YVR SS K++ +   + DR +HLTNDAVQ +S+ YG+ E GNKLT +     LD     H G  A ++ + L PR+ ELV +S+AA A+  +NR+  P  FELLGYDFMVD N + WLIEVNSNPCLE + P L  ++ R+I+  L + +D  F   E+    S  S+
Sbjct:  108 WIIKPAVMTNRGTGISVVDTVEAVSDIV--RKGEAKKRQWIVQRYMETPLLVRGRKFDIRCFVLVAATKGGRE-------------------------------------------------------------------------IRGHLYEHGYVRTSSRKFTLSH--LGDRMIHLTNDAVQNKSADYGKYEAGNKLTYEQFAGHLD---EAHAGDGARFMGEVL-PRIKELVTLSLAATASK-LNRKRTPGCFELLGYDFMVDANFKTWLIEVNSNPCLELSSPYLAGMLPRLIEHVLQLTVDVEFPRREQPASPSPASS 348          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A0G4G063_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G063_VITBC)

HSP 1 Score: 167 bits (423), Expect = 9.660e-42
Identity = 120/345 (34.78%), Postives = 175/345 (50.72%), Query Frame = 1
Query:   82 GEREGGRGAP-----TWVVKPAANSNCGFGIQVCCSKKEVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRKHSSTSATDGGRS 1101
            G+  GGRGA       W+VKP   SN G GI++    ++V  +V   GGR G+S  I+Q+YIERP LV GRKFDIR++ L+V +       HRSA                                    E++                            + A+ +RD Y+R SS  Y   P+   DR +HLTNDAVQ++S  YG+ E  NKL+  + Q +LD      +      +++ L  +M +++A +   AAAA +N   R ++FE+ GYDFMVD++ +VWL+E+N+NPCLE +   L +II  +I+ T+ VA+DP+F PP  H  H  + AT   RS
Sbjct:  366 GQANGGRGASYRFRNLWIVKPGEYSNRGNGIKITNRLEDVEMMV---GGRDGKST-IIQKYIERPFLVHGRKFDIRVYGLMVEE-------HRSAQ-----------------------------------EVI----------------------------VRAYMYRDGYLRTSSETY--RPDCF-DRMIHLTNDAVQKKSESYGRFEAANKLSYAEFQKYLDTCRPKDQVV----IQEHLVTQMQQIMADTF-RAAAANMNTNRRQHSFEIFGYDFMVDESNKVWLLEINTNPCLELSSAWLAHIIPLMIEHTIRVAVDPLFPPPPSHA-HLYSYATSNRRS 627          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A078ACP0_STYLE (Tubulin-tyrosine ligase family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ACP0_STYLE)

HSP 1 Score: 159 bits (401), Expect = 7.740e-39
Identity = 103/320 (32.19%), Postives = 156/320 (48.75%), Query Frame = 1
Query:  115 WVVKPAANSNCGFGIQVCCSKKEVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRKHSS 1074
            W++KP  N+N G GIQV  S  E+  ++ +   R+ R+ +IVQ+YIE+PLL+ GRKFDIR + ++ +                                                            I  V  G               + +RD Y R SS +YS   + + +R +HLTNDAVQ+ S  YG+ E GNKL+++D Q +LD    N+   +  ++ D       E +      A    I+ +     FEL GYDFM+D+N RV+LIE N+NPCLE +CP+L  II  V+D+TL +ALDP+F+P +  +++ +
Sbjct:  852 WIIKPGENTNRGCGIQVSDSLSEIQSMMSELKSRSQRT-FIVQKYIEKPLLINGRKFDIRCYGVMTS------------------------------------------------------------INGVQKG---------------YFYRDCYFRTSSKEYSI--QNLSNRLIHLTNDAVQKYSEDYGKYENGNKLSINDFQRYLD---INYPQLSINFMRDIFS--QIERLITDTYRAVYNKIDPERVKNCFELFGYDFMIDENFRVYLIEANTNPCLEISCPLLARIIPEVVDNTLRIALDPLFQPGQFDQEYQN 1088          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A8J8T968_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8T968_HALGN)

HSP 1 Score: 158 bits (400), Expect = 1.140e-38
Identity = 101/328 (30.79%), Postives = 153/328 (46.65%), Query Frame = 1
Query:  115 WVVKPAANSNCGFGIQVCCSKKEVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRK---HSSTSATD 1089
            W++KP  ++N G GI V  + +E+  ++     +      IVQRYIE+PLL+ GRKFDIR + LL                                                            +V G                 +  + +RD Y R SS ++S   E + ++++HLTNDA+Q+ S  YG+ E GNKL+++D Q +LD   S+H   +  ++ D       E +      +    I+       FEL GYDFM+DD  RV+LIE N+NPCLE +CP+L  II  V+D+T T+ALDP+F+P +  ++   HS    +D
Sbjct: 1220 WIIKPGEDTNRGCGINVSNNLQEIKQILRTEFNKRSSRTMIVQRYIEKPLLIHGRKFDIRCYALLT-----------------------------------------------------------TVNGC----------------LKGYFYRDCYFRTSSKEFSI--ENLSNKYIHLTNDAIQKNSEDYGKFENGNKLSINDFQRYLD---SHHAALSINFMRDIFS--QIERLVTDTFRSVYGKIDPHRIKNCFELFGYDFMIDDQFRVYLIEANTNPCLEISCPLLARIIPEVVDNTFTIALDPLFQPGQFDKEPSFHSQNQQSD 1465          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A1R2BGM2_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BGM2_9CILI)

HSP 1 Score: 155 bits (393), Expect = 1.830e-38
Identity = 97/318 (30.50%), Postives = 154/318 (48.43%), Query Frame = 1
Query:  112 TWVVKPAANSNCGFGIQVCCSKKEVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRK 1065
            TW++KP   +N G GI+V  S  ++  ++ ++  R   + +I+Q+YI+ PLL+  RKFDIR + LL +  +                                                                            +  +  +D Y+R S  ++  N +   D+FVHLTNDA+Q+    YG+ E GNKL+ +D Q +L     N  G+   + +D   P++ ++V  S+A A    IN +G+   FE+LGYDFM+D + +VWLIE+N+NPCLE +C  L  II  ++D++  +ALDP+F PPE H+K
Sbjct:  360 TWIIKPGEATNRGKGIKVSSSLDKIKSIISRQ--RKSHT-YIIQKYIQNPLLINKRKFDIRCYALLTSFANQ---------------------------------------------------------------------------LQGYFFKDGYLRTSCKEF--NIKNTNDKFVHLTNDAIQKNHEDYGKFESGNKLSYNDFQKFL-----NSIGSNIDFFKDIF-PQIVDIVKGSIACAKDI-INEEGKMNLFEVLGYDFMIDTDYKVWLIEINTNPCLELSCSYLSKIIPEMLDNSFRIALDPMFPPPENHKK 590          
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Match: A0A1R2BNG9_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BNG9_9CILI)

HSP 1 Score: 154 bits (390), Expect = 4.720e-38
Identity = 96/318 (30.19%), Postives = 152/318 (47.80%), Query Frame = 1
Query:  112 TWVVKPAANSNCGFGIQVCCSKKEVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMFVLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLDTGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSVKYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDESNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYDFMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPPEKHRK 1065
            TW+VKP   +N G GI+V  S  ++ D++ +R        +I+Q+YI+ PLL+  RKFDIR + L+ +  +                                                                            +  +  +D Y+R S  ++  N +   D+FVHLTNDAVQ+    YG+ E GNKL+  D Q +L+   SN       +  D   P++ ++V  ++A A    IN +G+  +FE+LGYDFM+D + +VWLIE+N+NPCLE +C  L  +I  ++D++  +ALDP+F PPE H++
Sbjct:  359 TWIVKPGEATNRGKGIKVSSSLDQIKDIISRRNENRT---YIIQKYIQNPLLINKRKFDIRCYGLITSFANQ---------------------------------------------------------------------------LQGYFFKDGYLRTSCKEF--NIKNTNDKFVHLTNDAVQKNHEDYGKYESGNKLSYYDFQKFLNSINSN-----VDFFNDIF-PQIVDIVKETIACAKDI-INDEGKLNSFEILGYDFMIDSDFKVWLIEINTNPCLELSCSYLSKVIPDMLDNSFRIALDPMFPPPESHKR 589          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4053.10483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LNH0_9PHAE7.680e-12652.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIE2_ECTSI1.570e-12560.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3US62_HETAK5.230e-5637.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3ZJX7_9STRA1.200e-4936.47Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1GB26_9STRA3.410e-4636.22Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0G4G063_VITBC9.660e-4234.78Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A078ACP0_STYLE7.740e-3932.19Tubulin-tyrosine ligase family protein n=1 Tax=Sty... [more]
A0A8J8T968_HALGN1.140e-3830.79Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
A0A1R2BGM2_9CILI1.830e-3830.50Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A1R2BNG9_9CILI4.720e-3830.19Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4053contigH-paniculata_contig4053:11729..16059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.3
Seed ortholog evalue5.2e-106
Seed eggNOG ortholog2880.D8LIE2
KEGG koko:K06047
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein polyglycylation
EggNOG OGsKOG2157@1,KOG2157@2759
Ec32 ortholog descriptionTubulin-tyrosine ligase/Tubulin polyglutamylase
Ec32 orthologEc-18_003990.1
EC6.3.2.25
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04812
Exons5
Model size1194
Cds size1194
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4053.10483.1prot_H-paniculata_contig4053.10483.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4053 11729..16059 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930240.9163733-CDS-H-paniculata_contig4053:11728..119081622930240.9163733-CDS-H-paniculata_contig4053:11728..11908Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 11729..11908 +
1691481206.0450652-CDS-H-paniculata_contig4053:11728..119081691481206.0450652-CDS-H-paniculata_contig4053:11728..11908Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 11729..11908 +
1622930240.9300063-CDS-H-paniculata_contig4053:12234..126901622930240.9300063-CDS-H-paniculata_contig4053:12234..12690Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 12235..12690 +
1691481206.0623012-CDS-H-paniculata_contig4053:12234..126901691481206.0623012-CDS-H-paniculata_contig4053:12234..12690Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 12235..12690 +
1622930240.9453368-CDS-H-paniculata_contig4053:13230..133431622930240.9453368-CDS-H-paniculata_contig4053:13230..13343Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 13231..13343 +
1691481206.0709488-CDS-H-paniculata_contig4053:13230..133431691481206.0709488-CDS-H-paniculata_contig4053:13230..13343Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 13231..13343 +
1622930240.963068-CDS-H-paniculata_contig4053:14567..147571622930240.963068-CDS-H-paniculata_contig4053:14567..14757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 14568..14757 +
1691481206.0795283-CDS-H-paniculata_contig4053:14567..147571691481206.0795283-CDS-H-paniculata_contig4053:14567..14757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 14568..14757 +
1622930240.9743018-CDS-H-paniculata_contig4053:15804..160591622930240.9743018-CDS-H-paniculata_contig4053:15804..16059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 15805..16059 +
1691481206.0896707-CDS-H-paniculata_contig4053:15804..160591691481206.0896707-CDS-H-paniculata_contig4053:15804..16059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4053 15805..16059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4053.10483.1

>prot_H-paniculata_contig4053.10483.1 ID=prot_H-paniculata_contig4053.10483.1|Name=mRNA_H-paniculata_contig4053.10483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=398bp
VASDVLPDNQDKSRRKKGGKFGAGSLSGEREGGRGAPTWVVKPAANSNCG
FGIQVCCSKKEVLDVVDQRGGRAGRSGWIVQRYIERPLLVRGRKFDIRMF
VLLVADPSTRSWRHRSASAGAIPRTAAETGSRSISDGGKYTVWEENKNLD
TGLEIVRTVDPEGSVIGSVADGRKMKSKGVGPSPITAWSHRDAYVRMSSV
KYSNNPEKVKDRFVHLTNDAVQRRSSRYGQGEPGNKLTLDDLQAWLDGDE
SNHKGTAAGWVEDTLRPRMHELVAISVAAAAAAGINRQGRPYAFELLGYD
FMVDDNLRVWLIEVNSNPCLEFACPMLENIIVRVIDDTLTVALDPIFRPP
EKHRKHSSTSATDGGRSEEIGQIARTRCGFSRVYPVLKQSSNHMEAT*
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mRNA from alignment at H-paniculata_contig4053:11729..16059+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4053.10483.1 ID=mRNA_H-paniculata_contig4053.10483.1|Name=mRNA_H-paniculata_contig4053.10483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4331bp|location=Sequence derived from alignment at H-paniculata_contig4053:11729..16059+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGCAAGTGACGTCCTTCCTGACAATCAAGACAAGTCTCGACGAAAAAA AGGGGGCAAGTTTGGAGCGGGTTCGCTTTCTGGAGAACGAGAAGGAGGGA GGGGTGCGCCGACGTGGGTTGTGAAGCCTGCCGCGAACTCCAACTGCGGC TTCGGTATCCAAGTGTGTTGTTCGAAAAAGGTGAGCATTCGTTTTGTTTT ATCATCGCCGGTACTCGCGGAGAGAGACAGGAACGAGGACTTCCGTACAT CTACCAAGCGTAGCTTCCGAAAAATGATAGGTACCCCAGATGCTACAGTG GCTGAAACTCTAAGCACAACACGCGAAGACGCCTCTATCTGTATCGTGTG TTCCACGAAGAGGCGATTCACTCAAGACAGTAGAAGCACCACCCAGGACT GCATGAAAAGCCTAGCCCAAGGCCATTCCCCGCAAGTCACTCTTATTGTC GAACATGTCTACTCTACCCCCCTCCTTTTTCCTTGGACCGAACCAAACGC TCCCAGGAAGTCCTTGACGTGGTGGACCAGAGAGGCGGCAGAGCAGGTCG AAGCGGTTGGATAGTTCAACGTTACATCGAGCGTCCGCTGCTGGTTCGTG GTCGCAAGTTCGACATCCGAATGTTCGTACTCCTGGTCGCTGATCCCTCC ACGCGTTCCTGGAGACACCGATCGGCGTCGGCTGGCGCGATTCCCCGAAC CGCTGCAGAAACTGGTTCGAGATCCATCTCTGATGGAGGGAAGTACACTG TGTGGGAGGAGAACAAGAACTTGGACACCGGACTGGAGATAGTTCGAACA GTGGATCCAGAGGGGTCGGTGATAGGAAGCGTGGCTGATGGGCGAAAAAT GAAGTCGAAGGGGGTCGGACCTTCTCCGATCACCGCTTGGAGTCATCGCG ATGCCTACGTGCGGATGAGTTCGGTGAAATACAGCAATAATCCAGAAAAG GTCAAGGATCGGGTAAGAGCTTCATTTCGGGGAGTGCAAGATATTGATTG ACCAACTCGGAACTCATGACGTCGATCTACTGCTTGCGCTCGAGGTTACA CGTTGTTATTATCGTGCCTAGAGTATAGCGTATGTAACTGAACATACAGG AGTATTCGGTGCAACAAACAGGTCGTGACGAATCGAGAACGTTATTCCCC CGGATGTCACCGAGCCCCACCCCCCCCCCCCCCCCTGCGTTCCATCCAGA ATTGCAGAAGGTTAACCTGTTCTGCCGGTATATCTTCGTGCAGCGCGATA TGAATATTTACTACCCTCAAGGGGGCGCTGTCGAATAATTTCTCACCGCG ATGTAGAAAATTATGTAAACGTTTCTCCATATCTGCGTCATCCCATATCG TAGAAAGCTTCAAACCAAATATCCCCTCGTCTCGTTCGTCTCGTTCTCCG TCTGTTTTTCCTTCCGTCGCGGGAACACTTCCCTCTTTCCCGGACAAAAT AAATACGATTTCAAATGATGGAAAACGAAACTCCCGGGCACCGTGTTGTC AGTTTGTGCATCTAACGAACGACGCGGTGCAGCGACGTAGCTCGAGATAC GGCCAGGGCGAGCCTGGCAACAAGCTGACGTTAGACGATCTTCAAGCTTG GCTCGATGGTGATGAGTGAGTGCAACATTCAAGAGCAAACATCAAAATTT GGGTTCAAAAATTTATACAGTATGTAGTCTTCCGGCAGCCGGCTTGGCAA AGCAAAATAATCGGAATTGAATTGTCGATAGAGATATCTCTACTATGTGC CACACTTGCAATAAAGCATGCGTGATTTCGGGCGTGACCTTTACAACGCG ACAGCACCACTTTCAATGCTCGGTAGCACCCTGAGTACATGCCAAGTATC CAGTGCGGAAATTGTCAGCACCGATTATCTGTATGGTGTGCATGTACGAG ATATGGAAAACTGACTGGAACCACGACGTGCCTGGTATGCGAATCGCGTC TCAGACCGAAAAGTATGAATTTCGCACTTCATTGAACAGCCTCAGATCGA GAAGAAGTAGACGACCAGAGGTGTGGTTCCCGCGGAGCGCACTGCTCTCT TGACCGCATAGCCGAGCACCAGGGCTTGAGATTGACGGCGAGAGTAACCG TAATAGTCTGGCAAGCATTATGTAGTGAAGAAATAACGATAACACAATCC ATTTAACGTACGATAATTTATCAGAATTGTTAAGTTGACCTCTCACAGTG CTATCTGTTGCGACGGGCCTGGTTTGTTTCCCATTTAAACGACTCGGTAC CGTATCTTCAATCACAATAACCCATGCTGCACTACTCAGAACCGCAAGCG TTTTTTGGTATTGAAGTACTGCAGGGGAATTGAAAGGGTTTTTCGGTGAT GATTACCCATATCCGGTATTCAGTGCTTTTTTTCGTCTGCAGATGTGCGA CAAGCCGCCATGCGATTGATATTCGTTCTGAAGCATCTATCGTTTACGAT CCTTACGTATGACCTTTGCCCTCTGCATGTATTTTTGCTACTCTCCAACA AGTAGCACTCGGATATACGGCTTTTGGAAGCGACAAGCAAAAAACGTTTT CACGAGCTAAACAAGCGTTATAATTCGTCCTGAAATTTGGTCTCTACATC GTGAACGGTTTCCATAAAGGGTGACAAAATGCTTGGTGGAATTGTGCTCC CAACCTAGCTTTTCTGACATCGTATCGCCCATCTCAAATCACGATACGTA TATGTAGATGAAGAAAGCTCTATACATCAAAGTCCACACTCGGACGTTGT TGTTGCTGCTGTTGTTGTTATCCCAGCCTCAACTGAATGGTGTCGCTTTT ATGTTGCAATCCATACCACCATGCTCGGTACTATTGCAGGTCTAATCACA AAGGCACAGCGGCAGGGTGGGTCGAGGACACTTTGCGGCCACGGATGCAT GAGTTGGTCGCCATCTCTGTCGCAGCGGCAGCGGCGGCGGGAATAAATCG GCAAGGGCGACCGTACGCCTTCGAGCTATTGGGGTACGACTTCATGGTAG ACGACAACCTACGAGTGTGGCTCATCGAGGTGACTATTAGAGGTAGTCCT CTCTATTTATTTCATAGGGCAAGACCCGGTGTCGGCGCTAGGGTAGGGCG CTGGGGCTGACGCTTGAGTCCATGCCTGCATGCATGTACAAACGATTAAG TGGTATGAGTGGTTGAGCCATAGATTGTGAAGAGTCGATGGATCGAGTAT ATTTTCAAGAAATGGCAGTTATCTCAATCACTGAACGATTGATGATAACA AAATAAGTGCAATTCAACATACAGCGTAGTTGTCCAAATCAGTTCTGTGG GTCACTAGAGCCGTTCGTCATGCAGTATCTCAACTGTAAATGTGCCCATT ACCTGCCCGTACTTGCTGTGTTAATTTGAAAGTTTAACGGTGCCCTATTA GCTGCCTCTCGACATAGTACAGACCCGTTTACCCAGTAGGTCACAGAGTA TATACTACTTGAGGTAAAAACGCAAGATTATTTAGAACCTATGCTGCTAT GACAGGCAGTACATGCTTGTAGGACGATACTGCGCCGGCTGTTCACCGAG AACTGCGTCATTGTGATCCTGTTATGATGCCGTGTTTAGATTCAGGATTA CCAACTTACTGTTGCTGTATGTAGGTGGCAATGAAGGAAAATAGCACACG AACAGCATGTTCTGCTACCGTGTAGTGCCCTAGGGTGTGAGAGAATAGTG TTTAGTGATTCCATTGTTCGATTTCGAACCCCATAGTGGCAATTCCGCAG TGTCTACCAGTGGACAGCACCCCAATTACCGGATTCTCGAGAAAACAATT TACCGTTATTAGAATACCATAGTACATATACAATAGTAGGCAGGAAAAGG TCAGTGAAAGCAGGCAGGATACCCTACAAAGAGTTTCCTAAGCTTTGAAT GGGCAGGCAATCATCGCACGTTCGCATAAATGTTTAGTCACCATTGTCTC CTGTTCTATTCGTTTACATTGGTAGTCATTATGCGGCCGGGATGACTTAT GTGTTTCTTATAGAAATGTATATGTTTTTTCACATACACCAACATAGGCT TCCTTTTTTCATGCTTTATTCAACAGGTGAACTCCAATCCATGCTTGGAA TTCGCGTGCCCCATGTTGGAGAACATTATCGTTCGGGTGATCGACGATAC GCTCACTGTCGCTCTAGACCCTATATTCCGCCCGCCTGAGAAGCACCGGA AACATTCATCTACTTCAGCAACTGATGGGGGAAGAAGCGAGGAAATTGGA CAGATAGCACGGACGCGTTGCGGTTTCAGTAGGGTCTACCCGGTGCTGAA ACAGTCCTCGAATCACATGGAAGCCACGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig4053:11729..16059+

>mRNA_H-paniculata_contig4053.10483.1 ID=mRNA_H-paniculata_contig4053.10483.1|Name=mRNA_H-paniculata_contig4053.10483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2388bp|location=Sequence derived from alignment at H-paniculata_contig4053:11729..16059+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGCAAGTGACGTCCTTCCTGACAATCAAGACAAGTCTCGACGAAAAAA
AGGGGGCAAGTTTGGAGCGGGTTCGCTTTCTGGAGAACGAGAAGGAGGGA
GGGGTGCGCCGACGTGGGTTGTGAAGCCTGCCGCGAACTCCAACTGCGGC
TTCGGTATCCAAGTGTGTTGTTCGAAAAAGGTGGCAAGTGACGTCCTTCC
TGACAATCAAGACAAGTCTCGACGAAAAAAAGGGGGCAAGTTTGGAGCGG
GTTCGCTTTCTGGAGAACGAGAAGGAGGGAGGGGTGCGCCGACGTGGGTT
GTGAAGCCTGCCGCGAACTCCAACTGCGGCTTCGGTATCCAAGTGTGTTG
TTCGAAAAAGGAAGTCCTTGACGTGGTGGACCAGAGAGGCGGCAGAGCAG
GTCGAAGCGGTTGGATAGTTCAACGTTACATCGAGCGTCCGCTGCTGGTT
CGTGGTCGCAAGTTCGACATCCGAATGTTCGTACTCCTGGTCGCTGATCC
CTCCACGCGTTCCTGGAGACACCGATCGGCGTCGGCTGGCGCGATTCCCC
GAACCGCTGCAGAAACTGGTTCGAGATCCATCTCTGATGGAGGGAAGTAC
ACTGTGTGGGAGGAGAACAAGAACTTGGACACCGGACTGGAGATAGTTCG
AACAGTGGATCCAGAGGGGTCGGTGATAGGAAGCGTGGCTGATGGGCGAA
AAATGAAGTCGAAGGGGGTCGGACCTTCTCCGATCACCGCTTGGAGTCAT
CGCGATGCCTACGTGCGGATGAGTTCGGTGAAATACAGCAATAATCCAGA
AAAGGTCAAGGATCGGGAAGTCCTTGACGTGGTGGACCAGAGAGGCGGCA
GAGCAGGTCGAAGCGGTTGGATAGTTCAACGTTACATCGAGCGTCCGCTG
CTGGTTCGTGGTCGCAAGTTCGACATCCGAATGTTCGTACTCCTGGTCGC
TGATCCCTCCACGCGTTCCTGGAGACACCGATCGGCGTCGGCTGGCGCGA
TTCCCCGAACCGCTGCAGAAACTGGTTCGAGATCCATCTCTGATGGAGGG
AAGTACACTGTGTGGGAGGAGAACAAGAACTTGGACACCGGACTGGAGAT
AGTTCGAACAGTGGATCCAGAGGGGTCGGTGATAGGAAGCGTGGCTGATG
GGCGAAAAATGAAGTCGAAGGGGGTCGGACCTTCTCCGATCACCGCTTGG
AGTCATCGCGATGCCTACGTGCGGATGAGTTCGGTGAAATACAGCAATAA
TCCAGAAAAGGTCAAGGATCGGTTTGTGCATCTAACGAACGACGCGGTGC
AGCGACGTAGCTCGAGATACGGCCAGGGCGAGCCTGGCAACAAGCTGACG
TTAGACGATCTTCAAGCTTGGCTCGATGGTGATGATTTGTGCATCTAACG
AACGACGCGGTGCAGCGACGTAGCTCGAGATACGGCCAGGGCGAGCCTGG
CAACAAGCTGACGTTAGACGATCTTCAAGCTTGGCTCGATGGTGATGAGT
CTAATCACAAAGGCACAGCGGCAGGGTGGGTCGAGGACACTTTGCGGCCA
CGGATGCATGAGTTGGTCGCCATCTCTGTCGCAGCGGCAGCGGCGGCGGG
AATAAATCGGCAAGGGCGACCGTACGCCTTCGAGCTATTGGGGTACGACT
TCATGGTAGACGACAACCTACGAGTGTGGCTCATCGAGGTCTAATCACAA
AGGCACAGCGGCAGGGTGGGTCGAGGACACTTTGCGGCCACGGATGCATG
AGTTGGTCGCCATCTCTGTCGCAGCGGCAGCGGCGGCGGGAATAAATCGG
CAAGGGCGACCGTACGCCTTCGAGCTATTGGGGTACGACTTCATGGTAGA
CGACAACCTACGAGTGTGGCTCATCGAGGTGAACTCCAATCCATGCTTGG
AATTCGCGTGCCCCATGTTGGAGAACATTATCGTTCGGGTGATCGACGAT
ACGCTCACTGTCGCTCTAGACCCTATATTCCGCCCGCCTGAGAAGCACCG
GAAACATTCATCTACTTCAGCAACTGATGGGGGAAGAAGCGAGGAAATTG
GACAGATAGCACGGACGCGTTGCGGTTTCAGTAGGGTCTACCCGGTGCTG
AAACAGTCCTCGAATCACATGGAAGCCACGTAAGTGAACTCCAATCCATG
CTTGGAATTCGCGTGCCCCATGTTGGAGAACATTATCGTTCGGGTGATCG
ACGATACGCTCACTGTCGCTCTAGACCCTATATTCCGCCCGCCTGAGAAG
CACCGGAAACATTCATCTACTTCAGCAACTGATGGGGGAAGAAGCGAGGA
AATTGGACAGATAGCACGGACGCGTTGCGGTTTCAGTAGGGTCTACCCGG
TGCTGAAACAGTCCTCGAATCACATGGAAGCCACGTAA
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