mRNA_H-paniculata_contig405.10478.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: D7FJJ3_ECTSI (SNF2 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ3_ECTSI) HSP 1 Score: 1353 bits (3503), Expect = 0.000e+0 Identity = 800/1424 (56.18%), Postives = 951/1424 (66.78%), Query Frame = 2
Query: 56 SLFRVVDASDVEKTVLRDAERRVRNATIPRFTVASA---LGYGPASLGKFCADANSLTLRMAADAVRRDGQQLRESGVANLAARDRVQMKEQILKGLLLRRSIDESDGTSKEEREAMGDLNGHADEDVSVECINRFG-DERQHREELINSGAITPLDVIGGGDATSQGRRGRVSLMEHKIAEGMTVKLPRPRRSKVRMRQRAETNPSAKRGPSIERDGLTMEQTHPRPHEALVDPLADVLKLNKNEGLSTFDDAEGQCQKCSNRQEDAPVCSACFETSKESPTTTARRCGSVSGVTEAQERRQSTSERSNAHTVECPTCEQFVRVDDPAHPCTSLSKHMDRCTR--RRGRARASGQAKD-EKDFGKESSPRRRSLLERRAERKRSGTRENANDSIRQHXXXXXXXQGKTRSSRSSSTNWEISTRSGKRRKVGNQESSRQDDLATSDTEVSSEALTGRQELIDDYDDAAFEARKVIGAKGWMAIVQHPSRCQPQSLKFNGLTLIVASSFAEQEDLLEEPLSAIVDEEHELHDGAADLGEGLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRSFVRRVLGWPSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLACRVGDSVATRFASHSVWTKDSDDSGDEEK-MYEEAQDDEHGAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSVDGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSA-LLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKSDDAAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKALEQLRRSRPNIRTGAVQVGFHSSWTGRNGGASPEHSLQATPRRSAQAASTNRNAGRRFGNVAIPGLTGGESGNSLSRQGGSFFDPAPRDSGMAEGQSTGMTSQDILRHLRERTQAQSSPAPGLFPEFQAPASSTSKDVHYAALLKRLEDFLVQAPSGVNTATLIQEFGDLPPEDVPVFRQLLRALAVCSNGEWKLRE 4300
SLFR VD +++E VL +A++R R+A+IP+F V+S LG+GP+SLG FC+ + R+AAD RR+G++LRE GV NLAARDRVQMK QIL+GLL R D+ +EE A G C+ E Q E+L+ +GA+TPLD GRR R ++ ++K+AEGMTVKLPR RR K R R+ S+ + E+ D ++ + STF Q Q+ S E GV S NA V+CP C Q V VDDPA+P LS+HMDRCTR RR R +G+A+ EK + PR S + KR G + N K+RSS TR+ KRRK Q + +S+T+ + + L G Q L+DD+DD FE RK + L VA+ E + LSA +A+LG+GL +D GI RLFQ+QRTG+RWMWQLHRQGAGGI+GDEMGLGKTVQV+++LGALH V+RR L+LCPATVLSHWMAELH WAP+LRVVVLHRCVQAFNA +G+S K R+ +RR+LGWP VVV+ASYEG+K+LKA LLPCNWDY VLDEGQRIRNPDAEVTL+CKQIRTVHRL+LTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQ RLAYRCALVLRDLI PYLLRR KKDLEDIIHLP+KTEQVLFCRLTSYQR LYS+FL+STEVKSVLSRTMRAFRAI ILRKLCNHPDL CR GDSV TR ASH +W DSD S EE EE++ D QRSGKLLVL+QILPLW +QGHRVLLFSQTRQML+IIE FV + W YGRLDG+TPVG RQ LID FN D++M+IMLLTTRTGGVG+NLTGADRVILFDPDWNPSTDMQ ARERSWRVGQ+RQVTVYRL+TAGTIEEKIYHRQIFKTALTNRVLQDPKQ+R+FSADELGDLFTLGDDG+ DGFTDT+DLFQG G++ P +Q S+ R+S+ + + R++ R KS R + S S+ LLGTATV + E D + +KSK DD AVLQALYEGAPLSSVFHHDLAEG M++EQKRMEEAAKRAAQ+A+ QLR SR +R GA Q GF SSWTGRNGG S E++ Q PR A N AGRRFG V+ P + G + G Q +F S + S G++SQDILR +R R Q +P+PG+FPEFQ P++S KD ++AALL+RL+D+L QAPSGV+TA LI F D+P DVPVFRQLL+A+A C+NGEW LR+
Sbjct: 4 SLFRAVDVAELETKVLAEADQRARDASIPQFFVSSTGEGLGFGPSSLGSFCSTTDPFIFRLAADVARREGRELREGGVGNLAARDRVQMKTQILRGLLRDRCGDDG----QEEAGAAG-------------CVEAASCSEEQSHEDLVKTGAVTPLDAFDDPTIGLAGRR-RKTIQDYKVAEGMTVKLPRSRRPKARTRE------------SVRKQA-----------ESGNDSFGELDNAGTSIDSSTF----VQPQRSSRGDE---------------------------GV----------SAEKNA-AVQCPVCAQMVTVDDPANPDICLSRHMDRCTRSARRRSCRQAGEARGLEKGSDASTRPRASSRGGGGSTSKRRGQDSDVNGG---------HLAAKSRSSALVDHLGTGVTRA-KRRKASGQAVVHGSE--SSETDAALKVLGGGQSLVDDFDDEDFETRKA-----------------------QVVDLSVANGVGE------DSLSA----------NSAELGDGLILDDGIAQRLFQFQRTGVRWMWQLHRQGAGGIVGDEMGLGKTVQVSAFLGALHGSSVMRRALILCPATVLSHWMAELHIWAPQLRVVVLHRCVQAFNAVSGNSGKLRALIRRILGWPEVVVVASYEGMKSLKAFLLPCNWDYCVLDEGQRIRNPDAEVTLICKQIRTVHRLILTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQARLAYRCALVLRDLIQPYLLRRQKKDLEDIIHLPAKTEQVLFCRLTSYQRRLYSEFLESTEVKSVLSRTMRAFRAIGILRKLCNHPDLVCRFGDSVVTRLASHQIWGGDSDASEKEEDDTAEESKSDNDHEVQRSGKLLVLQQILPLWHKQGHRVLLFSQTRQMLSIIERFVVNNEWSYGRLDGSTPVGNRQT----LIDRFNNDESMFIMLLTTRTGGVGVNLTGADRVILFDPDWNPSTDMQ-ARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIFKTALTNRVLQDPKQRRMFSADELGDLFTLGDDGASDGFTDTIDLFQGEGRVRFPQGEQQGSNSRRSEGASDVR--RKNGRKKSPSRRGNRVARRESASPSSSPLLGTATVTIAPASGDEERKSSVDGDQDSEKSKGDDNAVLQALYEGAPLSSVFHHDLAEGSGRMTMEQKRMEEAAKRAAQRAVNQLRMSRRTLRAGAGQGGFQSSWTGRNGGTSAENTSQDVPRAGNLMAGANVGAGRRFGTVSNPSIAGRQGGRE--GQDTAFLGQQEPASAPGQSSSAGVSSQDILRQIRLRNGTQPAPSPGIFPEFQTPSTSDDKDAYFAALLQRLQDYLAQAPSGVDTAALIHAFEDVPAGDVPVFRQLLQAVATCANGEWTLRD 1284
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: A0A835YM12_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM12_9STRA) HSP 1 Score: 694 bits (1791), Expect = 2.750e-229 Identity = 397/707 (56.15%), Postives = 470/707 (66.48%), Query Frame = 2
Query: 1715 MWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRSFVRRVLGW-PSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRA----FRAISILRKLCNHPDLACRVGDSVATRFASHSVWTKDSDDSGDEEKMYEEAQDDEHGAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSVDGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKSDDAAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKA----LEQLRRSRPNIRTGAVQVG----FHSSWTGRNG 3796
MWQLH+QGAGGI+GDEMGLGKTVQ+A+YLGALH G +R +V+ PATVL+HW+ ELH WAPRLRVV+LHR A+NAA G+++ + RR L P+VV L SYEGL+TL+ LL +WD VLDE QRIRNPDA++TL+CKQ+RT RL LTGTPIQN+L ELWSLFDFVFPGRLGTLPAF++EFA PIRVGGYANASP Q +LAYRCA+VLR LI P+LLRR K D+ D + LP KTEQVLFCRLT QR LY D + S +V++ SR + A FRAI +LRKLCNH DLAC G S+A A DS D E + EEA E GA +RSGKLLVL+Q+LPLWR GHRVL+F+QTR ML I+E +V+S W YGRLDGNTPVG RQ GLID FN D ++IMLLTTRTGGVG NLTGADRV+LFDPDWNPSTD Q ARER+WRVGQ + VTVYRLITAGTIEEKIYHRQIFKTALTNRVL+DP+Q+RLF+ +L +LF LGDDGS DG T+T D+FQG+G ++ + SRR T + G + DA VL+AL++ APLS VF HDLAEG S LE+LR SR I + G F +WTGR+G
Sbjct: 1 MWQLHQQGAGGIVGDEMGLGKTVQIAAYLGALHASGKLRSAIVVAPATVLAHWVRELHVWAPRLRVVLLHRSGAAYNAAWGAADGVDTVARRALRLAPAVVALTSYEGLRTLQRRLLSHDWDVAVLDEAQRIRNPDADITLVCKQLRTSARLALTGTPIQNSLLELWSLFDFVFPGRLGTLPAFDSEFATPIRVGGYANASPAQAQLAYRCAVVLRGLIDPHLLRRQKHDVRDAVKLPHKTEQVLFCRLTRRQRALYMDAICSPQVRA-RSRCVTAGLPRFRAIGVLRKLCNHADLACPPGASIAAAMAGTDPLEAAESDS-DSELVGEEA---EFGAAERSGKLLVLQQLLPLWRAAGHRVLVFTQTRGMLGILERWVRSRGWVYGRLDGNTPVGARQ----GLIDRFNTDPEVFIMLLTTRTGGVGTNLTGADRVLLFDPDWNPSTDAQ-ARERAWRVGQTKPVTVYRLITAGTIEEKIYHRQIFKTALTNRVLKDPRQRRLFNRSDLHELFLLGDDGSADGLTETNDVFQGAGVVELKKRP----SRRNGATEDPG-------------------------------------------------------------DAPDAGVLRALFDKAPLSGVFVHDLAEGGSAASXXXXXXXXXXXXXXXXXXXXXLERLRESRRAIHADLREAGSAGDFVPTWTGRSG 632
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: W7TYM9_9STRA (Dna excision repair protein ercc-6 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYM9_9STRA) HSP 1 Score: 656 bits (1692), Expect = 4.240e-212 Identity = 407/922 (44.14%), Postives = 529/922 (57.38%), Query Frame = 2
Query: 1628 GAADLGEGLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRR-VLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRSFVRRVLGW----PSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLAC---RVGDSVATRFASHSVWTKD-------SDDSGDEEKMYEEAQDDEH---------GAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDD--GSVDGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSK-----RAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKSDDAAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKALEQLRRSRPNIRTGAVQVGFHSSWTGRNGGASPEHSLQATPRRSAQAASTNRNAGRRFGNVAIPGLTGGESGNSLSRQGGSFFDPAPRDSGMAEGQSTGMTSQDILRHLRERTQAQSSPAPGLFPEFQAPASSTSKDVHYAALLKRLEDFLVQAPSGVNTATLIQEFGDLPPEDVPVFRQLLRALAVCSNGEWKLRE 4300
G L G + I +L+ YQRTG+RW+W+L+RQGAGGI+GDEMGLGKTVQV+++LG LHR G + LV+ PAT++S W++EL AWAPRLRVVVLHR AF A G K FVRRVLG +V L++YE LK L+ LL W Y LDEGQ+IRNPDAEVT+ KQ+ T+HRL+L+GTPIQNNLRELWSLFDF FPGRLGTLPAFE E A PIR+GGY+NA+P Q + AYRCALVLRDL+HPYLLRR+KKD+ I+ LP KTEQVLFC+LT Q+ LY + S E++ ++ FRAI++LRK+CNH DL G + R + W + +M A E GA RSGK+ VL +LP W RQGHRVLLFSQTRQML+++E FV+S W Y R+DG+T VG R A LI+ FN D +++ LLTTRTGG+GI+LTGA+RVILFDPDWNP TD+Q ARER+WR+GQ+R VT+YRL+T GTIEEKIY RQIFKTA++NRVL D KQKRLFS+ EL +LFTL +D G + DT F +D + RR+ K RR K R + TR +E +E+ R GE +++ +D +L+A+++G L+SV HD+ E + M+ A++ A +A L+ S ++ Q F +WTGR+G A G+ GG G S+ R G PR + S DIL RER GL D Y +LL+R++ FL + V T +++ F +P D +F+ +L+++ S G W LRE
Sbjct: 99 GPLALPGGFVLPASINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLHRSGRLEGGALVVAPATLMSQWVSELFAWAPRLRVVVLHRSAAAFAAQPGP--KVSRFVRRVLGMGRGRAGLVCLSTYESLKLLRKELLNHPWAYVALDEGQKIRNPDAEVTICAKQLPTIHRLILSGTPIQNNLRELWSLFDFCFPGRLGTLPAFETELATPIRLGGYSNATPTQAQCAYRCALVLRDLVHPYLLRRMKKDIMTILPLPKKTEQVLFCKLTPRQQALYRAVISSPEIRLIVEGKASHFRAITVLRKICNHADLVAGPDEEGTELMARLVAGGGWADEWRGEXXXXXXXXXXXRMVMPAAAREALASVTEGTMGAVCRSGKMQVLAAVLPRWARQGHRVLLFSQTRQMLDLLERFVRSRGWEYLRMDGSTNVGARPA----LIERFNQDTRVFVFLLTTRTGGLGISLTGANRVILFDPDWNPQTDIQ-ARERAWRLGQRRPVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDAKQKRLFSSGELKELFTLREDFAGDEEAPNDTAMEF-----MDGVVKKADVEGRRRGKKGGKXXXXRREKGRGGGRGEDEDDPVVSVTRGEE--------------VEEERGDGE----------EEEQDMEDNKILRAVFKGRGLASVLSHDVVEAGRRNTELWMEMQARARQVADRAAAALQASAAMVQATQAQDHFTPTWTGRSGSA---------------------------------GVGGG--GGSMPRFG-------PRRGXXXXXXXXXLASTDILSRFREREGRGEGSEGGL----------GGADARYVSLLERIKKFLREKGPRVPTEEVLRHFKHVPHSDAVIFKTMLKSVGKLSRGAWTLRE 932
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: A0A4D9D1F2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1F2_9STRA) HSP 1 Score: 641 bits (1654), Expect = 4.580e-202 Identity = 372/751 (49.53%), Postives = 475/751 (63.25%), Query Frame = 2
Query: 1628 GAADLGEGLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRR-VLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRSFVRRVLGW----PSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLAC---RVGDSVATRFASHSVWTKD-------SDDSGDEEKMYEEAQDDEH---------GAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDD--GSVDGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKSDDAAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKALEQLRRSRPNIRTGAVQVGFHSSWTGRNGGA 3802
G L G + I +L+ YQRTG+RW+W+L+RQGAGGI+GDEMGLGKTVQV+++LG LHR G + LV+ PAT++S W+AEL WAPRLRVVVLHR AF A G K FVRRVLG +V L++YE LK L+ LL W Y LDEGQ+IRNPDAEVT+ KQ+ T+HRL+L+GTPIQNNLRELWSLFDF FPGRLGTLPAFE E A PIR+GGY+NA+P Q + AYRCALVLRDL+HPYLLRR+KKD+ I+ LP KTEQVLFC+LT QR LY + S E++ ++ FRAI+ILRK+CNH DL G + R + W + +M A E GA RSGK+ VL ++LP W RQGHRVLLFSQTRQML+++E FV+S W Y R+DG+T VG R A LI+ FN D +++ LLTTRTGG+GI+LTGA+RVILFDPDWNP TD+Q ARER+WR+GQ+R VT+YRL+T GTIEEKIY RQIFKTA++NRVL D KQKRLFS+ EL +LFTL +D G + DT F +D + RR+ KT G+ RR K E+ + + T +E+ R GE +++ +D +L+A+++G L+SV HD+ E + M+ A++ A +A LR S ++ Q F +WTGR+G A
Sbjct: 568 GPLALPGGFVLPASINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLHRSGRLEGGALVVAPATLMSQWVAELFLWAPRLRVVVLHRSAAAFAAQPGP--KVSRFVRRVLGMGRGRAGLVCLSTYESLKLLRKELLNHPWAYVALDEGQKIRNPDAEVTICAKQLPTIHRLILSGTPIQNNLRELWSLFDFCFPGRLGTLPAFETELATPIRLGGYSNATPTQAQCAYRCALVLRDLVHPYLLRRMKKDIMTILPLPKKTEQVLFCKLTPRQRALYRAVISSPEIRLIVEGKASHFRAITILRKICNHADLVAGPDEEGTELMARLVAGGGWADEWRGGXXXXXXXXXXXRMVMPAAAREALASVTKGTMGAVGRSGKMQVLAEVLPRWARQGHRVLLFSQTRQMLDLLERFVRSRGWEYLRMDGSTNVGARPA----LIERFNQDTRVFVFLLTTRTGGLGISLTGANRVILFDPDWNPQTDIQ-ARERAWRLGQRRPVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDAKQKRLFSSGELKELFTLREDFAGDEEAPNDTAMEF-----MDGVVKKADVEGRRKGKTGGKGRKGRREK---------GRGXGRGEDEDDPVVSVTRGEAVEEERGDGE----------EEEQDVEDNKILRAVFKGRGLASVLSHDVVEAGRRNTELWMEMQARARQVADRAAAALRASAAMVQATQAQDHFTPTWTGRSGSA 1287
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: B8BQH0_THAPS (Rad54-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQH0_THAPS) HSP 1 Score: 608 bits (1569), Expect = 1.340e-199 Identity = 317/567 (55.91%), Postives = 408/567 (71.96%), Query Frame = 2
Query: 1616 ELHDGAADLGEGLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRSFVRRVLGWPSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLACRVGDSVATRFASHSVWTKDSDDSG---DEEKMYEEAQDDEHGAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSVDGFTDTVDLFQGSG 3307
E+ GA GL + I +RLF YQR G+RWMW+L+ GAGG +GDEMGLGKTVQV+S+LGA+ + VLV+CPAT+LSHW++EL WAP LR +++HR +G ++ +V++ +YE ++ + +W Y VLDEGQ+IRNPDAEVTL K++RT +RL+++GTPIQN+LRELWSLFDFVFPGRLGTLPAFEAEFA PI+ GGY+NASPMQV+LAYRCA+VLRDLI+PYLLRR KKD++++ +P KTEQVLFCRL+S QR LY D+L S EV V+ +++ +A+++LRK+CNHPDL VG T + + D+DD G +E+ E SGKL VL +ILPLW +QGHR +LF Q R+ LNIIE F + +W + RLDGNT V RQ L+D FN D++ + ML+TTRTGGVG+N+TGA+RV++FDPDWNP TD Q ARER+WR GQ++ VTVYRLITAGTIEEKIY RQIFKTA+TN+VLQDPKQ+RLFS +L DLFTL D S+D T+T D+ +G G
Sbjct: 11 EVPPGAVVYEGGLEVPAWINDRLFPYQRIGLRWMWELYCVGAGGCVGDEMGLGKTVQVSSFLGAMAANRFIDSVLVVCPATMLSHWLSELAVWAPGLRRIMVHR--------SGETDDYEEQGADAFCGTGIVLVTTYESIRRSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLMSGTPIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIVLRDLINPYLLRRQKKDIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEVMGVMRGSVQLLKAVTVLRKICNHPDLV--VGPDGRTLDSVQEESSSDNDDDGCFYGDERFVEV-----------SGKLQVLAKILPLWHKQGHRFILFCQWRKTLNIIEQFTRKQNWKFARLDGNTNVASRQK----LVDKFNNDESYFCMLMTTRTGGVGLNVTGANRVVIFDPDWNPQTDAQ-ARERAWRFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAITNQVLQDPKQRRLFSQKDLKDLFTLKAD-SIDS-TETGDITKGRG 549
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: A0A7S4HSG8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSG8_9STRA) HSP 1 Score: 623 bits (1607), Expect = 1.080e-198 Identity = 367/787 (46.63%), Postives = 467/787 (59.34%), Query Frame = 2
Query: 1628 GAADLGEGLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQA----FNAAAGSSEKTRSFVRRVLG----W----------------------------PSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLACRVGDSVATRFASHS-VWTKDSDDSG-DEEKMYEEAQDDEHGAPQ---------------RSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSV-----DGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKSDDAAVLQALYEGAPLSSVFHHDLAEGILVM---SVEQKRMEEAAKRAAQKALEQLRRSRPNI-RTGAVQVGFHSSWTGRNGGA 3802
GAA L GL + I +RLF YQRTG+RWMW+L+RQ AGG++GDEMGLGKTVQVASYLG V VL+LCPAT+LSHW++EL WAP LR V++H+ + GS RS +L W V+ +Y+ ++ + P WDY V+DEGQRIRNPDA+VTL CK++RT RL+L+GTPIQN+L+ELWSLFDFVFPGRLGTLPAFE EFA+PI+ GGYANA+PMQV+LAYRCALVLRDLI PYLLRR K+D+ ++ +P KTEQVLFCRL+S QR LY +L S +V + + R+FRAI+ILRK+CNHPDL C G F + V DSD S DE Y + +D A RSGKL VL +ILPLW+ QGHRVL+F+Q ++ML++IE FV W +GR+DG T V RQ L+D+FN D++ + ML+TTRTGGVG+NLTGADR+IL+DPDWNP TD Q ARER+WR GQ+ VTVYRLITAGTIEEKIYHRQIFKTA+TN+VLQDP+Q+RLFS +L DLFTL DG +G T+T ++ +G G +D +A+ +A + N D++ + D+ L+ + L+ VF HD E S+ + MEE A+ AA +A LR S P R G + F +WTG +G A
Sbjct: 98 GAAVLKGGLVVPAWINDRLFGYQRTGLRWMWELYRQEAGGVVGDEMGLGKTVQVASYLGCAVSCRKVGSVLILCPATMLSHWLSELSTWAPGLRRVLIHKSAEGGXXXXXXIGGSIRANRSISATLLRGLDKWLRKSRSDRVNEPIDDDDYDTYGEHAFVGTGYAVITTYDNVRRAVDVYTPHMWDYVVMDEGQRIRNPDADVTLACKRLRTPLRLLLSGTPIQNDLKELWSLFDFVFPGRLGTLPAFETEFADPIKRGGYANATPMQVQLAYRCALVLRDLIDPYLLRRRKRDVREVARMPGKTEQVLFCRLSSRQRGLYEAYLKSDDVLKAMRGSNRSFRAITILRKICNHPDLVCGAGRGSYRNFVENGYVGENDSDSSSSDEGGSYHSSDEDXSDAXXXXXGDDGFERGDVATRSGKLQVLAKILPLWKEQGHRVLIFTQWKKMLDVIERFVTLQGWKFGRMDGGTNVAGRQR----LVDTFNEDESYFGMLMTTRTGGVGLNLTGADRIILYDPDWNPQTDAQ-ARERAWRFGQKNAVTVYRLITAGTIEEKIYHRQIFKTAVTNQVLQDPRQRRLFSQRDLRDLFTLKPDGGSVAGGGEGMTETGEITRGRGVVDP----------------------------------------------DAAVAASAPXXXXXXXXXXXXXDAAAPNP-DERGEEDNKDTLEVVLRSKGLAGVFDHDFVEPASSKKKSSISAQEMEEQARNAADRAARHLRESAPRPGRDGREE--FTPTWTGASGAA 830
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: K3X7X0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7X0_GLOUD) HSP 1 Score: 608 bits (1568), Expect = 1.100e-192 Identity = 393/933 (42.12%), Postives = 534/933 (57.23%), Query Frame = 2
Query: 1607 EEHELHDGAADLGEGLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRS-FVRRVL--------------GWPSV-----VVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLACRVGDSVATRFASHSVWTKDSDDSGDEEKMYEEAQDDEHGAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGD-DTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSVDGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKS-DDAAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKALEQLRRSRPNIRTGAVQVGFHSSWTGRNGGASPEHSLQATPRRSAQAASTNRNAGRRFGNVAIPG---LTGGESGNSLSRQGGSFFDPAPRDSGMAEGQSTGMTSQDILRHLRERTQ---AQSSPAPGLFPEFQAPASSTSKDVHYAALLKRLEDFLVQAPS------GVNTATLIQEFGD-LPPEDVPVFRQLLRALAVCSNGEWKLRE 4300
E++ D GL++ I LFQ+Q+ + W+ LH + GGI+GDEMGLGKTVQ+A++LGA+H +R VL+LCPA+VL W+ ELH W P +RVV+LH A + A + +T S +R VL G PS VV+++YE ++ + L + WDY +LDEG RIRNPDAE+TL+CKQ +TVHR++LTGTPIQN LRELWSLFDFV+PG+LGTLP F+ EF PIR GGYANAS MQV +AY+CALVL+DLI+P+LLRR KK+++ + +P K EQ++FC LT Q+ +Y +L+S EV SVL R +R FRAISILR +CNHPDL +G + A + SV +D +G+P+ SGK+LVL +IL LW++QGHRVLLF+QTR+ML+I+E+ + + + + RLDG T V RQ+ L+D+FN D T++I LLTTR GG+GINL GADRV++FDPDWNPSTD+Q ARERSWR+GQ +QVT+YRLIT+GTIEEKIYHRQIFK LT +VL D K+KR F+ L DLF LGD DG +T LF G + P+ + E E G + E AA AE D S + D+ A+L+ L++G + SVF+HD E V + E +E + + A+ AL LR S IR V F +WTGR+G A ++ G FGN G LTG +S+ G P S A+ ++S+D+L ++ R A SS G P + + + K+L+ FL + + GV T L+ F + + P+D VFR+LLR +A C +W L++
Sbjct: 201 EDYYAPDDVVQTDSGLSVPTYIYAHLFQHQKECLEWLHHLHERNTGGILGDEMGLGKTVQIAAFLGAMHHAHRLRTVLLLCPASVLLQWVRELHKWYPLMRVVLLH----ASGSGATLAGRTYSQLIREVLDDYGDNDAGDDDDPGHPSGNGGGGVVISTYENVRQYQELFMDVEWDYVILDEGHRIRNPDAEITLVCKQFKTVHRIILTGTPIQNRLRELWSLFDFVYPGKLGTLPTFDDEFVLPIRTGGYANASKMQVLMAYKCALVLKDLINPFLLRRTKKEIQHVTKMPEKMEQIIFCSLTPRQQSVYQTYLNSPEVASVLHRDIRPFRAISILRHICNHPDLLSTIGANGA---GTSSVAIED------------------YGSPEASGKMLVLMEILGLWKQQGHRVLLFTQTRKMLDILESMMAQLGYSFCRLDGTTSVKERQS----LLDAFNADGSTIFIFLLTTRAGGIGINLIGADRVVIFDPDWNPSTDLQ-ARERSWRLGQTKQVTIYRLITSGTIEEKIYHRQIFKQYLTTKVLHDAKRKRCFNKHSLRDLFVLGD--QKDG-AETNGLFIA-GNVANPS--------------------------------------NALEKEDDGEEGQVSDDPEDVPAASSAAEDKDGESATNSSSAGDNDAILKKLFDGEGIQSVFNHDAVECDGVQNQEADLIEMESTKIAKSALSALRASCALIRQQRESV-FTPTWTGRSG----------------VAGDPSQRTGL-FGNRVARGRQPLTGSSGSSSVIGSGR----PGQSSSPFAQ---KSLSSKDMLTKIKMRKNGVAASSSTVVGS--GTGGPKLNKHGFMDADEMAKQLQAFLKPSLTDPRRRDGVTTEDLLDAFANVIAPKDKLVFRKLLRDMAECRGRKWTLKD 1034
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: A0A485K8S7_9STRA (Aste57867_1505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8S7_9STRA) HSP 1 Score: 597 bits (1538), Expect = 1.240e-190 Identity = 367/904 (40.60%), Postives = 515/904 (56.97%), Query Frame = 2
Query: 1649 GLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRSFVRRVLGWPSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLACRVGDSVATRFASHSVWTKDSDDSGDEEKMYEEAQDDEHGAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDT-MYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSVDGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKSDD--------------AAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKALEQLRRSRPNIRTGAVQVGFHSSWTGRNGGASPEHSLQATPRRSAQAASTNRNAGRRFGNVAIPGLTGGESGNSLSRQGGSFFDPAPRDSGM-AEGQSTGMTSQDILRHLRERTQAQSSPAPGLFPEFQAPASSTSKDVHYAA---LLKRLEDFLVQAPSGVNTATLIQEFGD-LPPEDVPVFRQLLRALAVCSNGEWKLRE 4300
GL + + LF +Q+ G+ W++ LH+Q AGGI+GD+MGLGKT+Q+ +YL LHR ++ VL+ CPA+VL HW+ E+H W P +RVV+LH ++GSS + + +++ +YE L+ L+P W+Y +LDEG +IRNPDAE+TL+ KQ+RTVHR++LTG+PIQN L+ELWSLFDFVFPG+LGT P FE EF PIR GGYANAS MQV +AY+CALVLRDLI PY+LRR+KKD++ LP+K EQV+FC LTS Q Y FL S EV+S+LSR ++ FRA+++LR +CNHPDL + R + V+ K D +D++G+ +SGK+ VL+ IL +W+ QGHRVL+F+Q R+ ++I+ ++S+ + Y RLDG T V RQ LID+FN D+ +++ LLTTR GG+GINLTGADRV++FDPDWNPSTDMQ ARERSWR+GQ +QVT+YRLIT+GTIEEKIYHRQ+FK L N+VL+DPKQKR F+ + L DLF L D + +G+ T T +ETG D E+E + + T R E + N D+ D+ +L+AL EG + VF D E + + E ++ + + A+ AL LR+S +IR F +WTGR G A GN A L G + ++ R+ SGM ++ Q M S+++L+ ++ R A + ++ + SS DV Y + L +L FL P+GV T ++ F + + P+D VFR LLR++A C W+L+E
Sbjct: 53 GLHVPQRVWTSLFPHQKEGLSWLYSLHQQNAGGILGDDMGLGKTIQICAYLSCLHRMQLIHSVLLACPASVLWHWVREMHKWCPEIRVVLLH--------SSGSSTASYGATINKVFTKGGMLVTTYENLRANAETLIPKEWEYVILDEGHKIRNPDAEITLVAKQLRTVHRIILTGSPIQNRLKELWSLFDFVFPGKLGTFPTFEDEFVLPIRHGGYANASKMQVLMAYKCALVLRDLIAPYMLRRMKKDVQIATDLPNKMEQVIFCNLTSAQISAYKTFLCSPEVRSILSREIKPFRALTVLRHICNHPDLVINTSE----RHTAPIVYPKIED------------MEDDYGSIDQSGKMQVLEIILRVWKSQGHRVLVFAQHRRTIDILAKMMRSLEYMYCRLDGTTSVRERQT----LIDAFNAPDSNLFVFLLTTRAGGIGINLTGADRVVIFDPDWNPSTDMQ-ARERSWRLGQTKQVTIYRLITSGTIEEKIYHRQLFKQYLMNKVLRDPKQKRCFNHNTLQDLFVLSDGSEL--------AKDENGRPMTTT------------GTETG--------------DLYLHGHVDVEAEVATIQSTLGSAA---RVESRTVEKEEKNIDDENFCDDEKDXXXXXXXXXXXNTELLKALVEGGSIKGVFSQDNIESDGIHNQEADLIQMESSKVAKNALSTLRQSCSSIRQQREDQ-FEVTWTGRRGSA---------------------------GNPAKSKLFGTKVNQNIKRK-----VKCIATSGMGSKHQELAMESEEMLKRIKLRRHAVDTSI-----KYASNKSSNRADVQYQSVDDLTTKLHAFLAARPAGVPTDVIVDYFSNAVAPKDKEVFRNLLRSMATCIGRVWRLKE 852
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: A0A024U6X5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6X5_9STRA) HSP 1 Score: 592 bits (1526), Expect = 5.920e-189 Identity = 363/898 (40.42%), Postives = 520/898 (57.91%), Query Frame = 2
Query: 1649 GLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQAFNAAAGSSEKTRSFVRRVLGWPSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLACRVGDSVATRFASHSVWTKDSDDSGDEEKMYEEAQDDEHGAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDT-MYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSVDGF----------TDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQKSKSDDAAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKALEQLRRSRPNIRTGAVQVGFHSSWTGRNGGASPEHSLQATPRRSAQAASTNRNAGRRFGNVAIPGLTGGESGNSLSRQGGSFFDPAPRDSGMAEGQST-GMTSQDILRHLRERTQAQSSPAPGLFPEFQAPASSTSKDVHYAA--LLKRLEDFLVQAPSGVNTATLIQEFGD-LPPEDVPVFRQLLRALAVCSNGEWKLR 4297
GL + + L+ +Q+ G+ W++ LH++ AGGI+GD+MGLGKT+Q+ ++L +L + V++ VL+ CPA+VL HW+ E+H W P +RVV+LH ++G++ T S + + +++ +YE L++ L+P WDY +LDEG +IRNPDAE+TL+ KQ+RTVHR++LTG+PIQN L+ELWSLFDFVFPG+LGT P FE EF PIR GGYANAS MQ+ +AY+CA+VLRDLI PY+LRR+KKD++ LP+K EQ++FC LTS QR Y FL S+EV++VLSR ++ FRA++ILR +CNHPDL + HS E + D++GA +SGKL VL+ IL +W+ Q HRVL+F+Q R+ ++I+ + ++ + Y RLDG T V RQ LID+FN D+ +++ LLTTR GG+GINLTGADRV++FDPDWNPSTDMQ ARER+WR+GQ + VT+YRLIT+GTIEEKIYHRQ+FK L N+VL+DPKQKR F+ + L DLF L D + T+T DL+ G +D + + S+ G+ R RA S DEE + +E+ R + D+ +L+AL EG +S VF D E V + E ++ + + AQ AL LR+S IR F +WTGR+G T N +RFG G+ + NS SG+ + S+++L+ ++ R QA + ++++ SS + + L K+L FLV+ GV T ++ +F D + P+D +FR LLR +A C+ W+LR
Sbjct: 51 GLHVPHRVWTELYPHQKEGLAWLYTLHQENAGGILGDDMGLGKTIQICAFLASLSKMKVLQTVLLACPASVLWHWVREMHKWCPEMRVVLLH--------SSGTATCTYSTSIKNVYAKGGMIVTTYENLRSNAEYLIPKEWDYVILDEGHKIRNPDAEITLVVKQLRTVHRIILTGSPIQNRLKELWSLFDFVFPGKLGTFPTFEDEFVLPIRHGGYANASKMQILMAYKCAMVLRDLIAPYMLRRMKKDVQIATDLPNKIEQIIFCSLTSAQRSAYKIFLCSSEVRAVLSREIKPFRALTILRHICNHPDLV--------SNSTEHSTTAP--------EHLDISLLGDDYGAIDQSGKLQVLETILRVWKAQNHRVLIFAQHRRTVDILAKMMNTLQYNYCRLDGTTTVRERQT----LIDAFNSSDSSIFVFLLTTRAGGIGINLTGADRVVIFDPDWNPSTDMQ-ARERAWRLGQTKPVTIYRLITSGTIEEKIYHRQLFKQYLMNKVLRDPKQKRCFNHNTLADLFILSDGSELTKDENGNEMKTTGTETGDLYLH-GHVDVAAEVA-------TLQSQLGESARVESRAVSSKDDDVASNDPDEEED----------AVEEPR----------------EDSVDNTEILKALMEGGSISGVFSQDSIESDGVHNQEADLIQMESTKVAQNALSALRQSCSAIRQQRSDQ-FEVTWTGRSG--------------------TAGNPTKRFGTKVAQGMKRKIACNS---------------SGLGRNHEVLALESEEMLKRIKMRRQAVDTGV-----KYKSTTSSKESVQYGSVDELTKKLHSFLVRHADGVPTDVIVHKFCDAVSPKDKEIFRNLLRNMATCTGRVWRLR 844
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Match: A0A6J1HR51_CUCMA (protein CHROMATIN REMODELING 8-like isoform X1 n=11 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1HR51_CUCMA) HSP 1 Score: 603 bits (1556), Expect = 9.800e-189 Identity = 376/955 (39.37%), Postives = 537/955 (56.23%), Query Frame = 2
Query: 1604 DEEHELHDGAA-DLGEGLTMDGGIVNRLFQYQRTGIRWMWQLHRQGAGGIIGDEMGLGKTVQVASYLGALHRGGVVRRVLVLCPATVLSHWMAELHAWAPRLRVVVLHRCVQ-------------------------AFNAAAGSSEKTRSFVRRVLGWPSVVVLASYEGLKTLKALLLPCNWDYGVLDEGQRIRNPDAEVTLLCKQIRTVHRLVLTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQVRLAYRCALVLRDLIHPYLLRRLKKDLEDIIHLPSKTEQVLFCRLTSYQRHLYSDFLDSTEVKSVLSRTMRAFRAISILRKLCNHPDLACRVGDSVATRFASHSVWTKDSDDSGDEEKMYEEAQDDEHGAPQRSGKLLVLKQILPLWRRQGHRVLLFSQTRQMLNIIENFVKSMSWPYGRLDGNTPVGRRQASESGLIDSFNGDDTMYIMLLTTRTGGVGINLTGADRVILFDPDWNPSTDMQQARERSWRVGQQRQVTVYRLITAGTIEEKIYHRQIFKTALTNRVLQDPKQKRLFSADELGDLFTLGDDGSVDGFTDTVDLFQGSGKIDTPTQDQHESSRRQSKTSETGKGQRRSKRAKSXXXXXXXXTRSDEESEQSALLGTATVVLEQNRAAGEIAEGTDVNGGDQ-------KSKSDDAAVLQALYEGAPLSSVFHHDLAEGILVMSVEQKRMEEAAKRAAQKALEQLRRSRPNIRTGAVQVGFHSSWTGRNGGASPEHSLQATPRRSAQAASTNRNAGRRFGNVAIPGLTG-GESGNSLSRQGGSFFDPAPRDSGMAEGQSTG--MTSQDILRHLRERTQAQSSPAPGLFPEFQAPASSTSK----------------DVHYAALLKRLEDFLVQAPSGVNTATLIQEFGD-LPPEDVPVFRQLLRALAVC----SNGEWKLR 4297
D E ++H+ ++ L GL + I ++LF YQ+ G++W+W+LH Q AGGIIGDEMGLGKTVQV ++LGALH + + +++CP T++ W E W P L V +LH N+ + ++K S + RVL S +++ +YE L+ L LL W Y VLDEG RIRNP+AEVTL+CKQ++TVHR+++TG+PIQN L ELWSLFDFVFPG+LG LP FEAEFA PI VGGYANASP+QV AYRCA+VLRDLI PYLLRR+K D+ HLP KTE VLFC LTS QR +Y FL S+EV+S+L + I ++RK+CNHPDL R HS D +G P+RSGK+ V++Q+L +W+ QGHRVLLF+QT+QML+I+E F+ + Y R+DG TPV +R A LID FN +++ +LTT+ GG+G NLTGADRVI+FDPDWNPSTDMQ ARER+WR+GQQR VTVYRLIT GTIEEK+YHRQI+K LTN++L++P+Q+R F A ++ DLFTL +D +VDG T+T ++F ++ + +E+ EQ +G +V + T+ +G D + +D +L++L++ + S +HD+ + E+ R+EE A + A++A E LR+SR +V V +WTG+ G A S++ R+FG+ + +S + SR G S + G+A G S+G ++S ++L +R + S GL AP+SS++ V L++++ F+ Q ++A+++Q F +P D+P+F+ LL+ +A+ S W L+
Sbjct: 367 DLEDDVHESSSVTLEGGLKIPQSIFDQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLAFLGALHFSNIYKPSIIVCPVTLVRQWKREARKWCPDLLVEILHDSAHDPTYRKMREKSYESDEXXXXXXXDYGKNSQSKGTKKWDSLINRVLRSESGMLITTYEQLRLLGGKLLDIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGSPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVN--AHLPKKTEHVLFCSLTSEQRSVYRAFLASSEVESILDGNRNSLSGIDVMRKICNHPDLLER----------EHSFQNPD------------------YGNPERSGKMKVVEQVLKVWKEQGHRVLLFAQTQQMLDILERFMVGGGYTYRRMDGGTPVKQRMA----LIDEFNNSCEVFVFILTTKVGGLGTNLTGADRVIIFDPDWNPSTDMQ-ARERAWRIGQQRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTLNED-AVDGSTETSNIF-----------------------------------SELTDSVNVVGVQKNEKDEQK--IGRGSVSYTDSADEKPCKSETETSGRDDSVEMGQGRGADEDENILKSLFDAHGIHSAVNHDII--VNADDGEKIRLEEQASQVARRAAEALRQSRILRSNESVSV---PTWTGKAGTAGAPSSVR-----------------RKFGSTVNSLVNNKSKSPDEASRNGASHLN------GLAAGTSSGKALSSAELLAKIRGNQERALSA--GLEHHQPAPSSSSNNVRGAGVGSSRSSKNLSGVQPEVLIRQICTFIQQRGGSADSASIVQHFKQRIPSNDLPLFKNLLKEIAILEKSPSGSLWVLK 1218 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig405.10478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig405.10478.1 >prot_H-paniculata_contig405.10478.1 ID=prot_H-paniculata_contig405.10478.1|Name=mRNA_H-paniculata_contig405.10478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1430bp MGTIAGGVASLFRVVDASDVEKTVLRDAERRVRNATIPRFTVASALGYGPback to top mRNA from alignment at H-paniculata_contig405:23344..34799- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig405.10478.1 ID=mRNA_H-paniculata_contig405.10478.1|Name=mRNA_H-paniculata_contig405.10478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11456bp|location=Sequence derived from alignment at H-paniculata_contig405:23344..34799- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig405:23344..34799- >mRNA_H-paniculata_contig405.10478.1 ID=mRNA_H-paniculata_contig405.10478.1|Name=mRNA_H-paniculata_contig405.10478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8580bp|location=Sequence derived from alignment at H-paniculata_contig405:23344..34799- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |