|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 459 |
| Cds size | 456 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4043.10461.1 >prot_H-paniculata_contig4043.10461.1 ID=prot_H-paniculata_contig4043.10461.1|Name=mRNA_H-paniculata_contig4043.10461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
ERLHLLAAEKGDVARWKSALKALREELSPEQMKEMHFSHGAKLLRLVVAR
GNIDVWESVVEALRTELSAEQVRELLVVKDESGRCIVSLAVRCNGVRILK
SMLRTAQQFLTVDQVYQLLLSSGVLNALVQVENTDILDILLKAVPQILGD
DE back to topmRNA from alignment at H-paniculata_contig4043:4629..7544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4043.10461.1 ID=mRNA_H-paniculata_contig4043.10461.1|Name=mRNA_H-paniculata_contig4043.10461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2916bp|location=Sequence derived from alignment at H-paniculata_contig4043:4629..7544- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGAGGCTGCATCTGCTTGCCGCGGAAAAAGGGGACGTCGCCCGGTGGAA
GAGCGCACTGAAAGCCTTGCGAGAGGAGCTCAGCCCCGAACAGGTGCAGA
GTATCCCTGGACAGTGTCGGTGCTCTAAAAGCGAAACTGAACAAGAAGAT
TCATTCGCTTTTGCACCTGTCAAGTGTTATCGATAAAAAAAGTACGCTGG
TAGTGGAGGCGAAACAAGGGCATTTGTACCATTCAAGAGCGATATACTGT
GCTGCAATCAAACGAACTGGTGGGCTACAGCACTAAATAAATAGTGTTTT
TTTGCAGCACACGCTTCGATTTCTCTTGTACTGCATTTGTACTCACGGCG
TGTCATGTATCCTTCCGCTCGCGGTCGCCCTACTCACTCAAGGCTGAATG
GTGGTGGTGGCTCTACCGCTGATGCTCTCGCTAATGCAAATTCGGATGTG
CTATTGAATGTGCTGCTTCCAGATGAAAGAGATGCACTTTTCGCACGGGG
CGAAGTTGCTGCGACTGGTCGTGGCACGTGGGAACATCGACGTATGGGAG
AGTGTGGTGGAAGCCCTGCGCACGGAGCTCAGTGCCGAACAGGTGCAGAT
AACTTCCGATGGTGTCACTGCTTTTAGAGCGGAGTTGATCTACCGCTCGT
TTGTCCGCGTTTGTAGTTTGTAGGGTGTTGCCCATCTGTATAGTGGATAC
TGGTGGTGGAGGTATCACTAAGGCACCTATTGCATACAACGGTATGGCTG
TAATCGCGACACAGAGGTTTGACTCCATTGCAAGTTGGGTTATTGAAAAG
ATCGTTGCCGGGTACGCTCAGGTTATACATTCAGGCTGAATATACCCGTG
ACGCTTTCCCCTTTTCTATCGTGGGTTTCGTAGGGGGAGATGTCTCGTTT
GAGTGAGGCTGGTGGTATATTCGGGTAATAATGGTTTGCCGAATGATAAT
TTGGTCGAAGGTTTTGTCTAATCAAGCAGCAGCTTCGAGAATATGCTGAA
TGGCCACGAAGAATTAGTTGTTTTGGCTGATATCAAATTCTTCCGTACTA
GGGTTACCTTAGAACGTGGGTGGGTCAAGGGAGTAGTGTCTTGTTGCTGA
ATTTGTTAGTTGTTGCATTGTGCGAGCACCCAAGGATGAACGTGCGCGTT
GTTGCTATGTATTTGATTGAGTCAGTATACGATACGTGGACGTTTCGCGA
TCGCCACAGGCACTACAAGACGCAGACGAAGTCGCAGCGTCGTGTAGCCT
CAAAGATACATGTGCACGTTTCACAGAATCTCATCACATACCTGACTGGC
TTCGGGTTTGTCTAAGTCCTTCGGTTAGCCTCTCACCTGGCCGTCACGGT
GGCAACCTCAATCAACAGCACACCGTCGGACTCGGCCTGTAATAGGCCCA
AATAGATCTATTGCGCACATCGACGCTGATATGGACCCACGTCTCTCAGT
GATTCCCCTACTCACCACTTGCATAGGGCCGTTTTAAACGAGCGAAGTCA
CTCGTCACCGATTTGTGTCGCTGATATATGCCCCTACAGGTGCGTGAGCT
TCTCGTGGTCAAGGATGAGTCCGGCCGCTGTATCGTCAGCTTAGCCGTTA
GGTGCAACGGCGTGCGAATTTTGAAGTCCATGTTGCGGACTGCACAACAG
TTTCTCACGGTTGACCAGGTACACTTGAAGCAATACGTGGAGTTCAGTAG
AGTCTAACGCTCTCGTGCCTTCTGCAACAATCATGTGGATGTGCGTAAAT
GATGAACAGTGTCGGCACTATCACACTTTATATCAATGCAAAGATCTCGT
AGCCAGTATGTAGACATACAATAGTGAGACCTGTGATAGCCTTAGAGCGT
ATGTGATAGTTCTAAACGAGTTCGCTTTTTTCCCGATTATCCCTATTTGC
GAAAAATTGAAATCGTGATAGCGAGCTCAACAAGTTGACGCCTGTGACCA
GAGTGCGCCAGACGTATGGGGAAAATATGCTGCAGAGCGTTTCGGCACCT
TTCCCTCGATATTGAGCTCGTTTTGGCTATTTCCAATTTTTCGGCAACAG
AAAAATCAGGAAAATTAGGGAAAAATACAGCCTCGTTTAGAACGGCTCCT
AACTCTTTGGAAACAGAAAGATCGGACAAGAAACAGCCTCATTCTAACTA
ACCAGACTGAGACTGTTCAAGTCCGATTGTTTCCATTTTCTGTTTCCGAA
AATCTGGAAATCGATAAAAAGGTACCGAACCCCACTACGGGATTTTGCCT
TCAAACGTACGTCTGGCGCATGTTTTGGTCACAGTACTGGCGTCATATTT
GTTCAGCTCGCTATCGCGATTTTTAATTTCGGGACATGAAAAAATCGAAA
AATTGAACCAAAAACAGCCTCGTTTAGAACATGCCTTAGAACGGTCCTTG
ATGCATTTGTTGGTTGTAGGACAAAAAAATTCCATGTGCTGTAGTTGTAA
TCTCGAGGCGTCCTTCGGTCAGCAAGTACGTCTCGTTTTGTTGGTGTTGT
TGGCGGGACCTCCTCTGAAGCTGTTGCCAAATTGCGGTTGGCCTCGATAG
AAACATCGCATAGGTCAGTCAGTCCAACGTCTATTTGGTAGGGTGACGTT
GAGTCTAATGCTTGAACATGTTGCGAAGAGTGGAAGACAATACAGCGGAA
ATAAACAGAGTCTAACTCGTTCTTTAATGTGCTGCTCTGCAAACTCTGTG
TACAACGTTTATCTCATTATATGATACGACCGGTAATAAAACCTCTCTTA
TACCGTATAATTATGTTGAATCTATGTCCGTTTTCGCTGTGTGGTTCCAG
GTGTACCAGCTGCTTCTTTCCAGCGGAGTTTTGAATGCCCTTGTCCAGGT
GGAAAACACAGATATTCTGGATATTCTGCTGAAGGCTGTACCGCAAATTT
TAGGGGATGACGAGAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig4043:4629..7544- >mRNA_H-paniculata_contig4043.10461.1 ID=mRNA_H-paniculata_contig4043.10461.1|Name=mRNA_H-paniculata_contig4043.10461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at H-paniculata_contig4043:4629..7544- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGAGGCTGCATCTGCTTGCCGCGGAAAAAGGGGACGTCGCCCGGTGGAA
GAGCGCACTGAAAGCCTTGCGAGAGGAGCTCAGCCCCGAACAGGAGAGGC
TGCATCTGCTTGCCGCGGAAAAAGGGGACGTCGCCCGGTGGAAGAGCGCA
CTGAAAGCCTTGCGAGAGGAGCTCAGCCCCGAACAGATGAAAGAGATGCA
CTTTTCGCACGGGGCGAAGTTGCTGCGACTGGTCGTGGCACGTGGGAACA
TCGACGTATGGGAGAGTGTGGTGGAAGCCCTGCGCACGGAGCTCAGTGCC
GAACAGATGAAAGAGATGCACTTTTCGCACGGGGCGAAGTTGCTGCGACT
GGTCGTGGCACGTGGGAACATCGACGTATGGGAGAGTGTGGTGGAAGCCC
TGCGCACGGAGCTCAGTGCCGAACAGGTGCGTGAGCTTCTCGTGGTCAAG
GATGAGTCCGGCCGCTGTATCGTCAGCTTAGCCGTTAGGTGCAACGGCGT
GCGAATTTTGAAGTCCATGTTGCGGACTGCACAACAGTTTCTCACGGTTG
ACCAGGTGCGTGAGCTTCTCGTGGTCAAGGATGAGTCCGGCCGCTGTATC
GTCAGCTTAGCCGTTAGGTGCAACGGCGTGCGAATTTTGAAGTCCATGTT
GCGGACTGCACAACAGTTTCTCACGGTTGACCAGGTGTACCAGCTGCTTC
TTTCCAGCGGAGTTTTGAATGCCCTTGTCCAGGTGGAAAACACAGATATT
CTGGATATTCTGCTGAAGGCTGTACCGCAAATTTTAGGGGATGACGAGGT
GTACCAGCTGCTTCTTTCCAGCGGAGTTTTGAATGCCCTTGTCCAGGTGG
AAAACACAGATATTCTGGATATTCTGCTGAAGGCTGTACCGCAAATTTTA
GGGGATGACGAG back to top
|