mRNA_H-paniculata_contig4037.10448.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4037.10448.1
Unique NamemRNA_H-paniculata_contig4037.10448.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: D8LJZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ9_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 8.070e-37
Identity = 97/181 (53.59%), Postives = 110/181 (60.77%), Query Frame = 3
Query:    3 VECDAFVVSP--RWLAKSTAFRRQGMSHCSATPVGTRFLTTVL--GATEDTSSTDQE------EPVTSSPPDV--YYEGLVGGQPINDDDAEVNK-----FTDYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEEDDAKYD-GPW 491
            V  DAFV SP  RW + +    R   +    TPV  R  +T +   AT               EP  S+ P+   YY GL+G QP  D      K      +DYPI LPSYLLL LATV SIAFTGSIFEV G HP+LGYTATYIIGTL+LPTFIFLFYAAIKKG+AEVEEDDAK+  G W
Sbjct:   16 VVSDAFV-SPKARWASAAINTNRH-QARSLTTPVAARVRSTTVRTAATXXXXXXXXXXXXXPAEPAKSAVPEDLDYYSGLIGEQPGADKAPASGKEEAVTTSDYPIPLPSYLLLVLATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPTFIFLFYAAIKKGKAEVEEDDAKFGKGRW 194          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A835YHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHG1_9STRA)

HSP 1 Score: 103 bits (258), Expect = 7.710e-23
Identity = 55/83 (66.27%), Postives = 62/83 (74.70%), Query Frame = 3
Query:  222 INDDDAEVNKFTDYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEEDD 470
            IN D  + +K   YPI+ P+Y LL L+TV +IAF GSIFEV G  P LGY  TYIIG L+LP FIFLFYAAIKKGQAE EEDD
Sbjct:   50 INLDAKDQDK--SYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDD 130          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A6T6GAQ8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6GAQ8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.810e-12
Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 3
Query:  132 TEDTSSTDQEEPVTSSPPDVYYEGLVGGQPINDDDAEVNKFTDYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEEDDAKY 479
            T+  + TD   P  SSPP    E                  T+YP+++PS LLL  + +  I  TG +FE+ G   QLG+ AT  +  +++PT +FLFYA+I K  AE EEDD +Y
Sbjct:   89 TKSETPTDVAVPEPSSPPKAVEEPT----------------TEYPLDVPSPLLLASSMILGIIGTGCVFELTGDAEQLGFAATAALTVVSIPTCLFLFYASILKATAETEEDDRRY 188          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A2V3IZS2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS2_9FLOR)

HSP 1 Score: 73.2 bits (178), Expect = 5.250e-12
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  264 PINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEED 467
            PIN PS +LL  ++V +IA  G +FE+ G HP  G+  T  I T++LP+F+FLFYAAIKKGQ E  ED
Sbjct:   58 PINAPSGVLLLSSSVLAIAAIGCVFELTGGHPTYGFNVTAGILTVSLPSFLFLFYAAIKKGQIEALED 125          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A7S0BY63_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY63_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.110e-11
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 3
Query:  225 NDDDAEVNKFTDYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEEDDAKYD 482
            ND+D++     + P+N+PS LLL  + + +IA  GS+F++ G  PQLG+  T  I T+     ++ FY AI KG +E EEDD K++
Sbjct:   39 NDEDSDSKPQLNVPLNIPSPLLLGSSMILAIAGVGSMFDIAGGSPQLGFPLTESIATVGTTISLYFFYCAILKGISETEEDDEKFN 124          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A7S2P364_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P364_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.140e-11
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 3
Query:  240 EVNKFTDYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEEDDAKY 479
            E  +   YPI+LPS +LL  + V +I+  GS+FE+ G  P+LG+  T  I  L LP  +FL YAAI KG AE EE D ++
Sbjct:   34 EEEELQAYPIDLPSPILLATSMVLAISSIGSLFELAGGTPKLGFAVTAAITALGLPISVFLIYAAILKGSAETEEADREF 113          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A7S4JDB9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JDB9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.350e-11
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 3
Query:  258 DYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEEDDAKY 479
            +YP+N+PS LLL  + + +IA  GSIFE+ G +P  G   T  I  + LPT +FLFYAAI KG AE EEDD  +
Sbjct:   89 NYPLNVPSPLLLGSSMILAIASIGSIFELSGGNPSNGVGPTAAIAAIGLPTCLFLFYAAIMKGIAETEEDDKAF 162          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: M2XU10_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XU10_GALSU)

HSP 1 Score: 68.9 bits (167), Expect = 2.920e-10
Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 3
Query:  264 PINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAE 455
            P+N+PS +LL ++ V +IAF GSIFE+   HPQ G   T +I   +LP+F+FLFYAAI+KG+ E
Sbjct:   81 PLNVPSGILLGVSCVLAIAFVGSIFELSSGHPQYGRELTSVILVSSLPSFLFLFYAAIQKGKDE 144          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A7S2XVJ4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.460e-9
Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = 3
Query:   48 STAFRRQGMSHCSATPVGT-------RFLTTVLGATEDTSSTDQ-----EEPVTSSPPDVYYEGLVGGQPINDDDAEVNKFTDYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEEDD 470
            S    RQG+      P GT       R   TV+ +TED     +     EEP    P   Y EG +   P+              + LP+YL L ++ V +IAF G+IFEV G  P LG+  T+ I   + P F++LFY ++K+GQ E +ED+
Sbjct:   58 SQIINRQGLK----VPTGTMKLRQLQRSSKTVIFSTEDEKMAAEVKKIFEEPPKQVPKPNYEEGGLPMIPM--------------LPLPAYLYLVVSCVVAIAFIGTIFEVSGGKPLLGFPLTWAIMVASGPGFLYLFYCSLKRGQIEEKEDN 192          
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Match: A0A1X6PBI0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBI0_PORUM)

HSP 1 Score: 55.5 bits (132), Expect = 1.500e-5
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 3
Query:  300 ATVGSIAFTGSIFEVIGKHPQLGYTATYIIGTLALPTFIFLFYAAIKKGQAEVEE 464
            ++V +IA  G +FE+    PQ G   T  I T+ +P F+FLFYAAIKKGQAE  E
Sbjct:  100 SSVAAIASIGCVFELSSGKPQYGVQLTTAILTVCVPGFLFLFYAAIKKGQAEERE 154          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4037.10448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LJZ9_ECTSI8.070e-3753.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHG1_9STRA7.710e-2366.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T6GAQ8_9STRA2.810e-1237.93Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A2V3IZS2_9FLOR5.250e-1254.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0BY63_9STRA1.110e-1140.70Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2P364_9STRA1.140e-1146.25Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4JDB9_9STRA1.350e-1151.35Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
M2XU10_GALSU2.920e-1053.13Uncharacterized protein n=2 Tax=Galdieria sulphura... [more]
A0A7S2XVJ4_9STRA1.460e-933.99Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1X6PBI0_PORUM1.500e-550.91Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4037contigH-paniculata_contig4037:9320..12284 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.1
Seed ortholog evalue5.1e-32
Seed eggNOG ortholog2880.D8LJZ9
Hectar predicted targeting categoryother localisation
EggNOG OGs2E3K4@1,2SY8W@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_007620.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1482
Cds size423
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4037.10448.1prot_H-paniculata_contig4037.10448.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4037 9391..11296 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930235.6280718-UTR-H-paniculata_contig4037:9319..93901622930235.6280718-UTR-H-paniculata_contig4037:9319..9390Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4037 9320..9390 +
1691481203.5991087-UTR-H-paniculata_contig4037:9319..93901691481203.5991087-UTR-H-paniculata_contig4037:9319..9390Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4037 9320..9390 +
1622930235.7107768-UTR-H-paniculata_contig4037:11296..122841622930235.7107768-UTR-H-paniculata_contig4037:11296..12284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4037 11297..12284 +
1691481203.656031-UTR-H-paniculata_contig4037:11296..122841691481203.656031-UTR-H-paniculata_contig4037:11296..12284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4037 11297..12284 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930235.6420174-CDS-H-paniculata_contig4037:9390..93951622930235.6420174-CDS-H-paniculata_contig4037:9390..9395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4037 9391..9395 +
1691481203.6123476-CDS-H-paniculata_contig4037:9390..93951691481203.6123476-CDS-H-paniculata_contig4037:9390..9395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4037 9391..9395 +
1622930235.6605034-CDS-H-paniculata_contig4037:10093..103791622930235.6605034-CDS-H-paniculata_contig4037:10093..10379Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4037 10094..10379 +
1691481203.6210725-CDS-H-paniculata_contig4037:10093..103791691481203.6210725-CDS-H-paniculata_contig4037:10093..10379Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4037 10094..10379 +
1622930235.6769514-CDS-H-paniculata_contig4037:11164..112961622930235.6769514-CDS-H-paniculata_contig4037:11164..11296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4037 11165..11296 +
1691481203.6384845-CDS-H-paniculata_contig4037:11164..112961691481203.6384845-CDS-H-paniculata_contig4037:11164..11296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4037 11165..11296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4037.10448.1

>prot_H-paniculata_contig4037.10448.1 ID=prot_H-paniculata_contig4037.10448.1|Name=mRNA_H-paniculata_contig4037.10448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
MSHCSATPVGTRFLTTVLGATEDTSSTDQEEPVTSSPPDVYYEGLVGGQP
INDDDAEVNKFTDYPINLPSYLLLCLATVGSIAFTGSIFEVIGKHPQLGY
TATYIIGTLALPTFIFLFYAAIKKGQAEVEEDDAKYDGPW*
back to top

mRNA from alignment at H-paniculata_contig4037:9320..12284+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4037.10448.1 ID=mRNA_H-paniculata_contig4037.10448.1|Name=mRNA_H-paniculata_contig4037.10448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2965bp|location=Sequence derived from alignment at H-paniculata_contig4037:9320..12284+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGTGGAGTGTGATGCCTTCGTCGTCTCTCCGCGATGGCTCGCAAAATCG ACGGCCTTCAGAAGGCAAGGCATGAGGTGTGTATTTTTGTGTGACTGGTG GACTCATGTTTGTCGCAGTACTCGAAGTGTAGTACGCACAGACGCAGAGA GGCATGAATCCACCAACTGCTGTAGACAGTGGTAACCTTCCAATGCCCAC GGATCGTTGCTACTGTTGTGTGTATACATACATTTGCTATGGCACATAGA TAAATAGAATCCAGGGATGGATAAACATGACAGACCTGCTCGCTCTAGAG AAACATGTCGGATTAGATATCTACTGACAGTTGTAGAAGCGGTTTTGTGT GTGAACAGTGAGAAAGTAGGGACACCTGCGTACTAAAAGTACGACAGAGT GGAGTTCTACGGGATAGATGACACGAACCCCGACACGGACAGCAGGGGAA GAGCCGCATAAGTGTTTCCTGTCCGTTGCTGCTATTGCATATGAATCAAG GAAGGAAAACACAAACAATGACAGAGAGAGAGAGAGAGAGAGAGAGAGCC GCAGATGTATCCCATCCCTGCGTCAGACCATAAATCACACCGAGTATGAC TCTCATGTGTGATGTGAGCACGAGCCTGGAGCTCCTACCAACAGCACGCT AACAAGGTGAAACAACTCGCCCCCACACTCACAACTGAATATGCCCTGAC CCGCTCGTATCTTCGTTCACCAACACAGCAGCGACCAAAGACTTGCCCAC ACCCTTCCTTTTCTCTTCATCCAGCCATTGCAGTGCTACCCCAGTTGGTA CACGATTCCTAACGACAGTCCTCGGGGCCACGGAAGATACCAGTAGTACC GACCAAGAAGAGCCAGTTACCTCATCGCCGCCGGACGTTTACTACGAAGG TCTAGTGGGAGGTCAGCCCATTAACGATGACGATGCGGAGGTGAACAAGT TTACAGATTACCCTATCAACCTACCATCATACTTGCTGCTGTGCCTGGCC ACGGTAGGGTCGATCGCGTTCACAGGGAGCATCTTCGAGGTTATAGGCAA GCATCCCCAGGTGAGAACGACGAATATATCTGCAAAATGCTCAATGCTCG AATCCCGACAAAACGTCGAGAATACCAACGAACTCAAGAATATCTCAGGT CCAACATTTTTTCTTCGCCGAAGGGGGGGCTTAATTAAGTCGCATTCAGT GAAGAGCGATAGTAGCCAAACGCCGGGCGTGCTTCATGAATTTCGTCACG ACCAAATAATCAAGTCCTGCTTAGCTGACTACGGGGTCATAATCTCCTAC AGGCTCGAGACATTAAACCAACAAAAGAAGAACAAATTAAAAATTCAAAT ATGTTTGGCTCTGTATGCACACGGACCAAATACACAAACCTACTAAATGT GCTTTACTTCCGCCTGTTTTCAAATCCACGGCTATAACATGAAAAAATGA CATATGCGGTTCGCGGGAAGTTGGTGTTCCAGTGTCAAACGCAACCAATC ACAAATCTAAAAATCGAGTCCTTAGTGTGCGGTGAGTCATGTCGATCCCC ATGTGCTACTTTTGTTTTCGCTTGGCTGCAAGTTAATTTACCAAGTATAA TACAATGACCACGAGACCGTATTGACGTTCGCGCCCGTCTCGAAGTTTAG AGGTAATTCGGGCGGCTTGATCCCCATGTGTTGATGCGCACAACCCGGTT CAGAGCGAATTTTGTGTCAGCCTGCTTGGGCAATTAACATCGGGTCTGCT CTACCTTAGCTGAACTCACGGGATGCTTGTGCTCACTCTCCCCCACTTCC CTCTCACCCTCCTCACTGCGCTCTTCGTTTCTACGATAACCTCAGCTGGG ATATACGGCCACCTATATCATTGGAACCCTCGCGCTACCGACGTTCATAT TTCTGTTTTACGCGGCAATAAAGAAGGGACAGGCAGAAGTAGAGGAGGAT GATGCCAAGTACGATGGTCCCTGGTAGGGAAAAACAGAGTTCGTAACATC AAGTTTTGTTTGTTGGTGGGTGTTGGAGTCGTCCGCAACGGATGACTTGG GCGGAATTAAGGGATCGTTAGGTCTTGAAGAGCTTCGACAAGAAGAGCTG CGAATACTCGTCTTTGCCTTTTACTCATTTACGGCGAAGCTGTCCTCGTT ATGCTGGAAGGTTTCGCGTTTGGAAGCTACGCACCGCAGGTGTCGAGATG AGTAGTACGGTACTTCAACGTATTAGAGGAGAGCCCTACATGGGGGTCCT TTCATGCGATCCAAGCGGGGTTGAGAGCGCGCTTCGCGGCGGTATTGTTG CTGGAATGTAAAATATACTCACAGGAAGTAGACTTGTGGTGGGTGGTTCA TAGGGATTCGGTATGTTGCTGTTGTGAATGAAAATGCTGTGTCGATTTGA CAGCCGGTCAATAAAGTTGCCCTAATTTTGAACTGCCCTATTCTGATTGT TGCACTACTGTGATCGTTATAACCCTGGAGTTCTGGGTTAGCCACAGTAG TAACACATCACTTGATTCCTGGTGAAATTGCTTGATAAAATACGATAGTA TCGAGCCAGGCCTAAACTCCAGGGTTGCACCTTGGGTAGACGAAGGCATT AAAATATATAGTACTAGTACTGAACCATTTCATTCTCTAGCAGCACGTGT GCAGGTATTTTTCAATGGAGAGGAAGGAAATAGATGCCCGCAGTTTTCTC ATCGGTAATTTTTTTTAAGGAGGATTATGATTGGCTGACGTAATCTGGTC GACGGCTGACGTCACCCATGGCATTGACGTCATTTGCCGGATTTTGATTG GCACAACAAAATCGCTTGTAGAAGACTTTTCATCGGTCCGAGATGGTGGC GTGACAATTGTAATTTTGCAAACAACCTCAATGTTTTAGATTTCGACCTA GTGTCCACGAGTTGCTTATTGCATAAGAAGAATGCCCACCAAGCTATTTT TTTTCCATCATTCAT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4037:9320..12284+

>mRNA_H-paniculata_contig4037.10448.1 ID=mRNA_H-paniculata_contig4037.10448.1|Name=mRNA_H-paniculata_contig4037.10448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at H-paniculata_contig4037:9320..12284+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGATGAGCCATTGCAGTGCTACCCCAGTTGGTACACGATTCCTAACG
ACAGTCCTCGGGGCCACGGAAGATACCAGTAGTACCGACCAAGAAGAGCC
AGTTACCTCATCGCCGCCGGACGTTTACTACGAAGGTCTAGTGGGAGGTC
AGCCCATTAACGATGACGATGCGGAGGTGAACAAGTTTACAGATTACCCT
ATCAACCTACCATCATACTTGCTGCTGTGCCTGGCCACGGTAGGGTCGAT
CGCGTTCACAGGGAGCATCTTCGAGGTTATAGGCAAGCATCCCCAGCCAT
TGCAGTGCTACCCCAGTTGGTACACGATTCCTAACGACAGTCCTCGGGGC
CACGGAAGATACCAGTAGTACCGACCAAGAAGAGCCAGTTACCTCATCGC
CGCCGGACGTTTACTACGAAGGTCTAGTGGGAGGTCAGCCCATTAACGAT
GACGATGCGGAGGTGAACAAGTTTACAGATTACCCTATCAACCTACCATC
ATACTTGCTGCTGTGCCTGGCCACGGTAGGGTCGATCGCGTTCACAGGGA
GCATCTTCGAGGTTATAGGCAAGCATCCCCAGCTGGGATATACGGCCACC
TATATCATTGGAACCCTCGCGCTACCGACGTTCATATTTCTGTTTTACGC
GGCAATAAAGAAGGGACAGGCAGAAGTAGAGGAGGATGATGCCAAGTACG
ATGGTCCCTGGTAGCTGGGATATACGGCCACCTATATCATTGGAACCCTC
GCGCTACCGACGTTCATATTTCTGTTTTACGCGGCAATAAAGAAGGGACA
GGCAGAAGTAGAGGAGGATGATGCCAAGTACGATGGTCCCTGGTAG
back to top