prot_H-paniculata_contig11616.1043.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11616.1043.1
Unique Nameprot_H-paniculata_contig11616.1043.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length695
Homology
BLAST of mRNA_H-paniculata_contig11616.1043.1 vs. uniprot
Match: D8LQ84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ84_ECTSI)

HSP 1 Score: 477 bits (1228), Expect = 6.240e-155
Identity = 353/760 (46.45%), Postives = 444/760 (58.42%), Query Frame = 0
Query:    3 TSRCVLGWVE-AGAAVSMVASSVEQRAFPSDILASCCSYMESLATARPERFAADCQSLGTPVAAVLM--------HE-----AMPSKDTSDE--QASSGHNGHHGTNISPKDQSGAAVRVNLWVDLLGICLLPFCAGDGG----------QTQSVDDRNQQ---GE-----FDSDDDTXXXXXXXSLGHGLP---SGRMRSGWVRGSLRRAEEASSGVEPLECPFDCRPGGKDAELTVRLTGLVSSYVKDAAQASRPSSVSSLATVLAVLCAFTAGEQVGAFG-------SHGEVVAEAFACLGEVANKTPEGTAEAECVKAALIALKECSEVARPSTLPQHVPLVLSVVEGVPAKLKLLLARTKGQDPKSYSTALSFCRQARAAAIACSRTVIRRAGAEFVAANPDRFLREFVVSMASPLLLADAVRALRVASLA--------------GGDGLEGVDVTHALRGMVLPGAVERLTKALESIDRYSTAATVEVLKAISELAKAAGGE-LRPYQAQLGIALVE-GATGGRSSRKGG----DEKLRLCLKAIRCICASSMQIHNASQTLTARSLGSSAAG---AAVNSGSPDASERFAEEAFELSLGVVEGEWTGDAGREGGGVRAGDEPSIVTVVEAHRTLAALLRS-GLRVPGITADGDWPETAKRVALLARAIAERIR-SAGCAGAMYPLADDDIMLLCQGAEVLEATTDGASAFFVGSESSA--WSGKLSQVLTTLRSTCDEGSLHPVVLDACSWVR 691
            TSR VL WVE A AA +   SS  +R FP  +L SCC YME+LATA P RF+ADC+SL  PVA+ ++        H+     A+P ++T  E  +   G     G  I+ ++++     + LWV++LGICLLPFC   GG          +  S DD N +   GE     FDSD   XXXXXXX    G      G+ RS WV G +RRA    +  EPLECPFD RPGG+D ++ VRL  L+S + + AA ASRP+SVS                             SH  VV EAF+CL  ++   PE +A+AECVKAAL++LKEC++ AR   L   VP  LS++EGVP++LKLLL R+K Q  K YSTA SFCR+A  AA+AC+R +I   G   V  +P  FL  FVV MASPLLL DAV ALR ASLA              G DG     +  ALR +VLPGAV RL KAL +IDRYS AA  EVLKA + LA+AAG E +RP++ +LG+ALVE  A+ GR+S  GG    DEK+RLCL+AIR + A+                   AAG   AA +   P A+++F E A E + GVVE EW G  G  G       + SI+T+VEAH TL ALLRS  + VPGI  DG+WP  AKR+A LA A+A R+R +AG   +   LADDD+MLLCQG EVLEA  + +  FF G  S    + G LS VLTTLR   D+ ++HPVV DACSWVR
Sbjct:   57 TSRRVLAWVECAAAAAAAPHSSDGRRVFPPVLLTSCCRYMEALATAYPARFSADCRSLARPVASCVLVMTRTAKAHDSAIGVAVPCRETKGEGEENDDGFPSRSGRTITIEERNA----LELWVEMLGICLLPFCGSGGGSRTTSRSGLGEATSGDDDNSRDPSGEHGDDPFDSDXXXXXXXXXXXXXXGSRVSGDGKARSRWVAGWMRRA--GITLAEPLECPFDVRPGGRDEDMPVRLATLISYHAQAAASASRPASVSXXXXXXXXXXXXXXXXXXXXXXXXXTPSESHALVVEEAFSCLLCLSETVPESSAQAECVKAALVSLKECAQSARLRCLEHRVPAALSMLEGVPSRLKLLLTRSKSQGAKVYSTARSFCREALTAAVACARKLIGLVGGLVVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEGGEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLKATAWLARAAGAEEIRPHRNRLGMALVECAASVGRASGAGGGVERDEKVRLCLRAIRRLGAAXXXXXXXXXXXXP------AAGDVLAAASDREPAAAQQFTEAALEFTCGVVEREWVGKRGERGEQEGGDGQESIITLVEAHVTLVALLRSPSMCVPGIGPDGEWPPAAKRLAKLAWAVAYRVRKAAGAVESSMALADDDVMLLCQGLEVLEALEECSGEFFEGKRSKMRFFEGDLSPVLTTLRGCHDKNTMHPVVYDACSWVR 804          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11616.1043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ84_ECTSI6.240e-15546.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11616contigH-paniculata_contig11616:1969..7054 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11616.1043.1mRNA_H-paniculata_contig11616.1043.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11616 1523..7727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11616.1043.1 ID=prot_H-paniculata_contig11616.1043.1|Name=mRNA_H-paniculata_contig11616.1043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=695bp
MCTSRCVLGWVEAGAAVSMVASSVEQRAFPSDILASCCSYMESLATARPE
RFAADCQSLGTPVAAVLMHEAMPSKDTSDEQASSGHNGHHGTNISPKDQS
GAAVRVNLWVDLLGICLLPFCAGDGGQTQSVDDRNQQGEFDSDDDTDSDD
EGDSLGHGLPSGRMRSGWVRGSLRRAEEASSGVEPLECPFDCRPGGKDAE
LTVRLTGLVSSYVKDAAQASRPSSVSSLATVLAVLCAFTAGEQVGAFGSH
GEVVAEAFACLGEVANKTPEGTAEAECVKAALIALKECSEVARPSTLPQH
VPLVLSVVEGVPAKLKLLLARTKGQDPKSYSTALSFCRQARAAAIACSRT
VIRRAGAEFVAANPDRFLREFVVSMASPLLLADAVRALRVASLAGGDGLE
GVDVTHALRGMVLPGAVERLTKALESIDRYSTAATVEVLKAISELAKAAG
GELRPYQAQLGIALVEGATGGRSSRKGGDEKLRLCLKAIRCICASSMQIH
NASQTLTARSLGSSAAGAAVNSGSPDASERFAEEAFELSLGVVEGEWTGD
AGREGGGVRAGDEPSIVTVVEAHRTLAALLRSGLRVPGITADGDWPETAK
RVALLARAIAERIRSAGCAGAMYPLADDDIMLLCQGAEVLEATTDGASAF
FVGSESSAWSGKLSQVLTTLRSTCDEGSLHPVVLDACSWVRSRC*
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