mRNA_H-paniculata_contig40150.10404.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig40150.10404.1
Unique NamemRNA_H-paniculata_contig40150.10404.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 8.830e-66
Identity = 124/341 (36.36%), Postives = 198/341 (58.06%), Query Frame = 1
Query:   58 VFCFTPTISDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKI 1062
            +F +  T SDPCVY   S D   +L ++VDDIL+TG   +++   + +LM+ F +TD+GE+  + G+EV  + + GTL +SQ  Y   IL R+ +  ANP  TPG   + S       ++     + +QAI GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + K  +  F+++ +       RSTTG + F   G + + ++ Q + A +T EAEL AL+  A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF  +R+ T+  ++ + H  S+  LADI TK   +  FA +   I
Sbjct:  389 IFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 729          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 3.970e-62
Identity = 124/340 (36.47%), Postives = 187/340 (55.00%), Query Frame = 1
Query:   67 FTPTISDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQ--IRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKIS 1065
            F    SDPCVY    N   I L L+VDD+L+ G     +  V+ +L  +F +TDLGE SL+ G+E+  +++  TL +SQ  Y  SIL+RF +S + PT TPG  ++ S      +++D   T+ YQ IVGSL+++    R+DI ++  Q AR M+ P++ H+VAAK  LRYL G  D   TY +   ++  FS++ +       +ST+  +   AN  + F S LQ +TA ST EAEL A A   KE ++   +  +L       Q  +  DN   LH   N ++SSR+KH+A+RF  IR+     ++ + +  + D LADI TK   +  F  L   I+
Sbjct:   94 FVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLIN 433          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 8.890e-59
Identity = 125/340 (36.76%), Postives = 187/340 (55.00%), Query Frame = 1
Query:   67 FTPTISDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQ--IRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKIS 1065
            F    SDPCVY    N   I L L+VDD+L+ G     +  V+ +L  +F +TDLGE SL+ G+E+  +++  TL +SQ  Y  SIL+RF IS + PT TPG  ++ S      +++D   T+ YQ IVGSL+++    R+DI ++  Q AR M+ P++ H+VAAK  LRYL G  D   TY +   ++  FS++ +       +ST+  +   AN  + F S LQ +TA ST EAEL A A    E ++   +  +L       Q  +  DN   LH   N ++SSR+KH+A+RF  IR+     ++ + +V + D LADI TK   +  F  L   I+
Sbjct: 1323 FVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 1662          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 5.420e-58
Identity = 124/340 (36.47%), Postives = 186/340 (54.71%), Query Frame = 1
Query:   67 FTPTISDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQ--IRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKIS 1065
            F    SDPCVY    N   I L L+VDD+L+ G     +  V+ +L  +F +TDLGE SL+  +E+  +++  TL +SQ  Y  SIL+RF +S + PT TPG  ++ S      +++D   T+ YQ IVGSL+++    R+DI ++  Q AR M+ P++ H+VAAK  LRYL G  D   TY +   ++  FS++ +       +ST+  +   AN  + F S LQ +TA ST EAEL A A   KE ++   +  +L       Q  +  DN   LH   N ++SSR+KH+A+RF  IR+     ++ + +V + D LADI TK      F  L   I+
Sbjct:  654 FVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLIN 993          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 6.380e-57
Identity = 112/306 (36.60%), Postives = 180/306 (58.82%), Query Frame = 1
Query:   58 VFCFTPTISDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTR 957
            +F +  T SDPCVY   S D   +L ++VDDIL+TG   +++   + +LM+ F +TD+GE+  + G+EV  + + GTL +SQ  Y   IL R+ +  ANP  TPG   + S       ++     + +QAI GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + +  +  F+++ +       RSTTG + F   G + + ++ Q + A +T EAEL AL+  A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF  +R+  R
Sbjct: 1168 IFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRNSRR 1473          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 9.060e-57
Identity = 116/304 (38.16%), Postives = 179/304 (58.88%), Query Frame = 1
Query:  160 TGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALY-------RTRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARL 1050
            TG T  ++ D++ QL +KF +TD G   L+ G+E+  ++  G + +SQHKYV++ILD++ +    P  TPG   +      +   +     K YQ IVGSL+FLT+ TR++I ++V+   R M+ PT QH+V AKR+LRYLRG PD+P  + R + ++  + +A +       + RS+TG +   A G V  +S LQK+TA S+  AE+ A+A  A+E IYL G+  +L     +  I SD+ G +  A NS +  RSK ++ R+  +R       +++  V S +QLADILTK  ERV F +L
Sbjct:  394 TGKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEI--SQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNIPIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKL 695          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.070e-55
Identity = 103/292 (35.27%), Postives = 167/292 (57.19%), Query Frame = 1
Query:  205 MNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKI 1062
            M+ F +TD+GE+  + G+EV  + + GTL +SQ  Y   IL R+ +  ANP  TPG   + S       ++     + +Q I GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + +  +  F+++ +       RSTTG + F   G + + ++ Q + A +T EAEL AL+  A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF  +R+ T+  ++ + H  S+  LADI TK   +  FA +   I
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 292          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 3.610e-55
Identity = 122/353 (34.56%), Postives = 186/353 (52.69%), Query Frame = 1
Query:   67 FTPTISDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRN-------------QLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQ--IRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKIS 1065
            F    SDPCVY    N   I L L+VDD+L+ G     +  + +             +L  +F +TDLGE S   G+++  +++  TL +SQ  Y  SIL+RF +S + PT TPG  ++ S      +++D   T+ YQ IVGSL+++    R+DI ++  Q AR M+ P++ H+VAAK  LRYL G  D   TY +   ++  FS++ +       +ST+  +   AN  + F S LQ +TA ST EAEL A A   KE ++   +  +L       Q  +  DN   LH   N ++SSR+KH+A+RF  IR+     ++ + +V + D LADI TK   +  F  L   I+
Sbjct:  302 FVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 6.120e-55
Identity = 120/341 (35.19%), Postives = 186/341 (54.55%), Query Frame = 1
Query:   58 VFCFTPTISDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSANPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALY-----RTRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKI 1062
            V  F PT SDPCVY  GS DT ++L L+V+DIL++G    L+ D++ +L ++F +TD+GE+ LI G++V  + + GTL +SQ  YV SIL+   + + NP               +  ++ AA +K YQ+I GSL++L  C R+D  ++V Q  R  S P + H  AAK  LRY+RG PD+   + R +  V  F+++ +       +STTG+                        E+EL A++  AKE  YL  +   L  + +    I SD+ G L LAAN+ +SSR+KH+A+RF  +++  + + + V HV +   LADI TK  +R  F  +  +I
Sbjct:  550 VIGFRPTQSDPCVYIHGSGDTLVILTLYVNDILISGKDPDLVADLKKELQDRFEITDIGEVRLILGMKVTRSYENGTLVVSQKGYVKSILESLGMENCNPP--------------ADELLGAAESKLYQSITGSLLYLAQCKRYDQSYAVNQLTRACSKPARAHTTAAKHALRYIRGTPDLLIIFKRGRFRVAAFADSSFGAIPDNRKSTTGLQ----------------------VESELQAISYGAKEAAYLSSLLMALKFENLKPISIYSDSSGTLSLAANTMFSSRTKHIALRFFVLQESIKPRHIAVHHVPTQAMLADIATKHLDRNKFNSIIHQI 854          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6A3J8V8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J8V8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.200e-50
Identity = 112/325 (34.46%), Postives = 186/325 (57.23%), Query Frame = 1
Query:   82 SDPCVYSKGSNDTSIMLNLFVDDILVTGPTDKLLMDVRNQLMNKFTVTDLGEISLIRGLEVLHNKQTGTL*LSQHKYVLSILDRFNISSA----NPTQTPGIKTDQSATSNSGSVMDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYS----RSKLEV---VDFSNALYRTRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDL-QINSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTK 1020
            +D CVY K S D  + + L+VDD+++   T + + +V+  L + F + +LGE   I G+E+ H++ TGTL + Q +YV  +++RFN   A    NP +T G+K  ++ +  + +  +    K Y++++GSL+++T CTR D+ + V Q ++F+  P QQH  AA R+LRYL+   D    YS    ++ LEV    D+ + L   RS +G+M         F S+ Q+  A S+ EAE  AL+ C +E ++     + L   Q+ + Q+  DN G + LA+N+ Y++R+K + IR   I +      + VD+V + DQLAD+LTK
Sbjct:   86 ADKCVYVKVSKDNYVYVCLYVDDMIIAAKTSEEINEVKMALKSAFKMKELGEAKFILGMEIDHDRTTGTLMVKQTRYVDDVVNRFNQQDAKAVVNPCET-GMKLSKTQSPATDAEREDMRGKPYKSLIGSLLYITTCTRPDVAYIVTQLSQFLENPGQQHWKAAIRVLRYLKTTKDFGIVYSGNNGKAVLEVYTDADWGSNLDGRRSVSGIMMMIGGAPGVFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRATLKDLGHEQVGATQVWEDNQGAIALASNAGYNARTKRVDIRHHYIGENVARDIITVDYVGTEDQLADLLTK 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF46_9PHAE8.830e-6636.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5U2_9PHAE3.970e-6236.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE8.890e-5936.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE5.420e-5836.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHG5_9PHAE6.380e-5736.60Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5J897_9PHAE9.060e-5738.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC04_9PHAE1.070e-5535.27Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JME8_9PHAE3.610e-5534.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9R3_9PHAE6.120e-5535.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3J8V8_9STRA1.200e-5034.46Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40150contigH-paniculata_contig40150:275..1486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.5
Seed ortholog evalue2.4e-28
Seed eggNOG ortholog67593.Physo130920
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QH7N@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1071
Cds size657
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40150.10404.1prot_H-paniculata_contig40150.10404.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig40150 830..1486 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930230.1050732-UTR-H-paniculata_contig40150:274..3381622930230.1050732-UTR-H-paniculata_contig40150:274..338Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig40150 275..338 +
1691481201.1154432-UTR-H-paniculata_contig40150:274..3381691481201.1154432-UTR-H-paniculata_contig40150:274..338Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig40150 275..338 +
1622930230.116724-UTR-H-paniculata_contig40150:479..8291622930230.116724-UTR-H-paniculata_contig40150:479..829Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig40150 480..829 +
1691481201.1314318-UTR-H-paniculata_contig40150:479..8291691481201.1314318-UTR-H-paniculata_contig40150:479..829Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig40150 480..829 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930230.1280897-CDS-H-paniculata_contig40150:829..14861622930230.1280897-CDS-H-paniculata_contig40150:829..1486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40150 830..1486 +
1691481201.140693-CDS-H-paniculata_contig40150:829..14861691481201.140693-CDS-H-paniculata_contig40150:829..1486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40150 830..1486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig40150.10404.1

>prot_H-paniculata_contig40150.10404.1 ID=prot_H-paniculata_contig40150.10404.1|Name=mRNA_H-paniculata_contig40150.10404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAK
RILRYLRGYPDIPTTYSRSKLEVVDFSNALYRTRSTTGMMPFFANGSVYF
SSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQIRSDN
IGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADIL
TKQCERVTFARLCSKISIL
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mRNA from alignment at H-paniculata_contig40150:275..1486+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig40150.10404.1 ID=mRNA_H-paniculata_contig40150.10404.1|Name=mRNA_H-paniculata_contig40150.10404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig40150:275..1486+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACAGTCTACGCACTGGATGTTCAAGTTACTTTTCTAAAGGGCAAACTGAA GGAAAGTGTCTTCTGTATACAAGCACTTGGCTTCGAGAAGACGGACTTCA CTAGAAGACAACCCTACGCGATGAGTTTAAAGAGATCCATATATGGGTTG CGCCAAAGCCTAAATGTTTGGAGCCATACCATCGACAACGAACTGAGGGG CACAGGCTTTACACCGACCATCTCGGATCCTTGTGTGTACAGTAAAGGAA GCAACGACACCTCCATTATGCTCAACCTTTTTGTCGACGACATATTAGTT ACAGGACCAACTGACAAACTGCTAATGGATGTTCGCAACCAACTCATGAA CAAGTTCACCGTCACGGACCTTGGAGAGATATCGCTTATTCGTGGCTTGG AGGTACTGCACAACAAACAAACTGGCACCCTTTAGCTATCACAGCACAAG TACGTACTGTCCATTTTGGACAGGTTCAACATATCGTCGGCAAATCCTAC CCAGACGCCAGGTATTAAAACGGACCAAAGCGCTACTAGTAATAGTGGCA GCGTAATGGATGCAGCAGCCACGAAGGACTATCAAGCCATCGTAGGGAGT CTCATCTTCCTGACTCATTGTACAAGATTCGACATCTGCTTCAGCGTCAT CCAAGCAGCACGGTTCATGAGTGCACCAACCCAACAGCACTTGGTGGCAG CAAAGCGCATTCTTCGCTATTTGCGGGGCTACCCTGATATTCCAACCACC TACAGTAGAAGCAAACTGGAAGTGGTCGACTTCTCTAACGCATTGTACCG CACAAGGTCTACAACGGGCATGATGCCCTTCTTTGCTAACGGATCGGTAT ACTTCTCGTCTCGACTTCAGAAGATCACAGCTACAAGCACAACTGAGGCG GAACTCACCGCACTAGCCGCATGCGCTAAAGAAGGTATTTACCTTCTAGG GATCTGCAGACAACTTGACCTTCAAATTAACAGCTGTCAAATCCGTAGTG ACAACATAGGCATCCTCCACCTCGCAGCAAATAGCAATTACTCCAGCCGC AGCAAACATCTAGCCATCAGATTTGCAGAAATTCGTGACTGGACCAGGAG CAAGCAGCTCATCGTCGACCATGTATCAAGTTCAGATCAGCTAGCCGACA TCCTCACTAAGCAGTGTGAGAGAGTGACGTTTGCTCGACTATGCAGCAAA ATTTCGATATTG
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Coding sequence (CDS) from alignment at H-paniculata_contig40150:275..1486+

>mRNA_H-paniculata_contig40150.10404.1 ID=mRNA_H-paniculata_contig40150.10404.1|Name=mRNA_H-paniculata_contig40150.10404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig40150:275..1486+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGCAGCAGCCACGAAGGACTATCAAGCCATCGTAGGGAGTCTCAT
CTTCCTGACTCATTGTACAAGATTCGACATCTGCTTCAGCGTCATCCAAG
CAGCACGGTTCATGAGTGCACCAACCCAACAGCACTTGGTGGCAGCAAAG
CGCATTCTTCGCTATTTGCGGGGCTACCCTGATATTCCAACCACCTACAG
TAGAAGCAAACTGGAAGTGGTCGACTTCTCTAACGCATTGTACCGCACAA
GGTCTACAACGGGCATGATGCCCTTCTTTGCTAACGGATCGGTATACTTC
TCGTCTCGACTTCAGAAGATCACAGCTACAAGCACAACTGAGGCGGAACT
CACCGCACTAGCCGCATGCGCTAAAGAAGGTATTTACCTTCTAGGGATCT
GCAGACAACTTGACCTTCAAATTAACAGCTGTCAAATCCGTAGTGACAAC
ATAGGCATCCTCCACCTCGCAGCAAATAGCAATTACTCCAGCCGCAGCAA
ACATCTAGCCATCAGATTTGCAGAAATTCGTGACTGGACCAGGAGCAAGC
AGCTCATCGTCGACCATGTATCAAGTTCAGATCAGCTAGCCGACATCCTC
ACTAAGCAGTGTGAGAGAGTGACGTTTGCTCGACTATGCAGCAAAATTTC
GATATTGATGGATGCAGCAGCCACGAAGGACTATCAAGCCATCGTAGGGA
GTCTCATCTTCCTGACTCATTGTACAAGATTCGACATCTGCTTCAGCGTC
ATCCAAGCAGCACGGTTCATGAGTGCACCAACCCAACAGCACTTGGTGGC
AGCAAAGCGCATTCTTCGCTATTTGCGGGGCTACCCTGATATTCCAACCA
CCTACAGTAGAAGCAAACTGGAAGTGGTCGACTTCTCTAACGCATTGTAC
CGCACAAGGTCTACAACGGGCATGATGCCCTTCTTTGCTAACGGATCGGT
ATACTTCTCGTCTCGACTTCAGAAGATCACAGCTACAAGCACAACTGAGG
CGGAACTCACCGCACTAGCCGCATGCGCTAAAGAAGGTATTTACCTTCTA
GGGATCTGCAGACAACTTGACCTTCAAATTAACAGCTGTCAAATCCGTAG
TGACAACATAGGCATCCTCCACCTCGCAGCAAATAGCAATTACTCCAGCC
GCAGCAAACATCTAGCCATCAGATTTGCAGAAATTCGTGACTGGACCAGG
AGCAAGCAGCTCATCGTCGACCATGTATCAAGTTCAGATCAGCTAGCCGA
CATCCTCACTAAGCAGTGTGAGAGAGTGACGTTTGCTCGACTATGCAGCA
AAATTTCGATATTG
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