prot_H-paniculata_contig40150.10404.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40150.10404.1
Unique Nameprot_H-paniculata_contig40150.10404.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 9.680e-42
Identity = 88/213 (41.31%), Postives = 130/213 (61.03%), Query Frame = 0
Query:    7 KDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALY-------RTRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARL 212
            K YQ IVGSL+FLT+ TR++I ++V+   R M+ PT QH+V AKR+LRYLRG PD+P  + R + ++  + +A +       + RS+TG +   A G V  +S LQK+TA S+  AE+ A+A  A+E IYL G+  +L     +  I SD+ G +  A NS +  RSK ++ R+  +R       +++  V S +QLADILTK  ERV F +L
Sbjct:  483 KLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNIPIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKL 695          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 5.310e-41
Identity = 78/214 (36.45%), Postives = 127/214 (59.35%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKI 216
            +Q I GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + +  +  F+++ +       RSTTG + F   G + + ++ Q + A +T EAEL AL+  A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF  +R+ T+  ++ + H  S+  LADI TK   +  FA +   I
Sbjct:   79 FQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 292          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.850e-39
Identity = 80/214 (37.38%), Postives = 128/214 (59.81%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKI 216
            +QAI GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + K  +  F+++ +       RSTTG + F   G + + ++ Q + A +T EAEL AL+  A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF  +R+ T+  ++ + H  S+  LADI TK   +  FA +   I
Sbjct:  516 FQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 729          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.440e-38
Identity = 78/208 (37.50%), Postives = 126/208 (60.58%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFA 210
            +QAI GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + +  +  F+++ +       RSTTG + F   G + + ++ Q + A +T EAEL AL+  A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF  +R+ T+  ++ + H  S+  LADI TK   +  FA
Sbjct:  675 FQAITGSLLYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFA 882          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A392M4C3_9FABA (Uncharacterized protein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M4C3_9FABA)

HSP 1 Score: 139 bits (349), Expect = 5.900e-37
Identity = 86/228 (37.72%), Postives = 123/228 (53.95%), Query Frame = 0
Query:    3 AAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVV-----------DFSNALYRTRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINS-CQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKISI 218
            A   K+Y+ IVGSL++L   TR D+ FSV   ARFM  PT+ H+ A KRILRYLRG       Y RSK + +           D++  L   +ST+G +    N +V +SSR Q I   STTEAE  A AACA + I+L  +   L +  +    +  DN   + L  N     R KH+ +RF  +RD T+   + + H  S DQ+ADI+TK  +  +F++L S + +
Sbjct:   25 ACDAKNYKQIVGSLMYLL-ATRLDLAFSVCLVARFMERPTEMHIAAIKRILRYLRGTVGFGIMYKRSKKKSIAELKLQGWTDSDYAGDLDDRKSTSGYVFMLGNAAVSWSSRKQPIVTFSTTEAEFVAAAACACQSIWLKNVLSHLQVMTDEKILVHCDNSSSIKLTKNPILHGRCKHIDVRFHFLRDLTKDGVIELVHCKSQDQIADIMTKPLKFESFSKLRSCLGV 251          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5KY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY35_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.130e-35
Identity = 78/214 (36.45%), Postives = 123/214 (57.48%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKI 216
            +QAI GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG P +P  Y + +  +  F+ + +       RSTTG M F   G + + ++ Q + A +T EAEL AL   A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF   R+ T+  ++ + H  S+  LADI TK   +  F  +   I
Sbjct:  376 FQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPGLPIVYKKGQFRLSCFTESSFGANPDNGRSTTGYMFFLGGGLISYGAKAQTLAAQNTVEAELQALGFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFPRELTKGHRITL-HQPSATMLADIATKHRPKQRFTTIMQLI 588          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5JN55_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN55_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 9.520e-35
Identity = 73/200 (36.50%), Postives = 120/200 (60.00%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALY-----RTRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTK 202
            +QAI GSL++L  CTR+D+ ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + +  +  F+++ +       RS TG +     G + + ++ Q + A +T EAEL AL+  A+E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+A+RF  + + T+  ++ + H  S+  LADI TK
Sbjct:  593 FQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNRRSPTGYLFSLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLGELTKRHRITLHHQPSATMLADIATK 792          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A6H5K8X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X2_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.220e-34
Identity = 72/210 (34.29%), Postives = 119/210 (56.67%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVVDFSNALYRT-----RSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQ-INSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARL 212
            +QAI GSL+ +  CTR+ + ++V Q  R  + P Q H+ AAK +LRYLRG PD+P  Y + +  +  F+++ +       RSTTG +     G + + ++ Q + A +T E EL AL+  A E +Y+     ++  +   S  I SD+ G L +A+N+ +SSR+KH+   F  +R+ T+  ++ + H  S+  LADI TK   +  FA +
Sbjct:   58 FQAITGSLLCVAQCTRYHLSYAVHQPTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDIGRSTTGYLFCVGGGLIGYGAKAQTLAAQNTVEVELQALSFSACEAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIRFFFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATI 267          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A5N5ICZ4_9ROSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5ICZ4_9ROSA)

HSP 1 Score: 133 bits (334), Expect = 3.090e-34
Identity = 79/217 (36.41%), Postives = 128/217 (58.99%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRSKLEVV------DFSNALYRTRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQI-RSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKISI 218
            ++ +VGSL++LT  TR D+ + V   +RFMS PT+QH +AAKR+LRYL+G  D+   Y +   + +      DF+  +   +ST+G +  F++G+V +SS+ Q + + STTEAE  A A+CA + ++L  +  +LD +   C I   DN   + L+ N     RSKH+ IRF  +R+  R   + + H ++ DQ+ADI+TK      F +L S + +
Sbjct:   83 FKQVVGSLMYLT-ATRPDLMYGVSLISRFMSCPTEQHWLAAKRLLRYLKGTTDLGIFYKKGGCKQLTVYSDSDFAGDVDDRKSTSGCVFMFSSGAVSWSSKKQPVVSLSTTEAEYIAAASCACQCVWLRRVLAKLDHEQEKCTIILCDNSSTIKLSKNPVLHGRSKHIDIRFHFLRELVRDGVVDLRHCNTEDQVADIMTKPLRLEVFLKLRSLLGV 298          
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Match: A0A5D3DVM8_CUCME (Putative mitochondrial protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DVM8_CUCME)

HSP 1 Score: 134 bits (336), Expect = 3.520e-34
Identity = 83/218 (38.07%), Postives = 127/218 (58.26%), Query Frame = 0
Query:    9 YQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAKRILRYLRGYPDIPTTYSRS-KLEVVDFSNALYR-----TRSTTGMMPFFANGSVYFSSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDL-QINSCQIRSDNIGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADILTKQCERVTFARLCSKISIL 219
            Y+ +VGSL++LT  TR DI ++V   +RFM++P + HL+AAKRILRY++G PD+   Y R  KL +V FS++ Y       +S +G +    +G + +SS+ Q I   STTEAEL    +CA + I+L  I   L+  Q  +  I  DN   + L+ N     RSKH+ IR+  +RD+     + + +  S DQ+ DILTK  +  TF +L S + ++
Sbjct:  121 YKQMVGSLMYLT-ATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRNRVLHERSKHIDIRYHYLRDFINDGIINLSYCKSEDQVTDILTKPLKLATFLKLRSLLGVI 337          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40150.10404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J897_9PHAE9.680e-4241.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC04_9PHAE5.310e-4136.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE1.850e-3937.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S9_9PHAE2.440e-3837.50CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A392M4C3_9FABA5.900e-3737.72Uncharacterized protein n=1 Tax=Trifolium medium T... [more]
A0A6H5KY35_9PHAE2.130e-3536.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN55_9PHAE9.520e-3536.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K8X2_9PHAE2.220e-3434.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5N5ICZ4_9ROSA3.090e-3436.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5D3DVM8_CUCME3.520e-3438.07Putative mitochondrial protein n=1 Tax=Cucumis mel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..207
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40150contigH-paniculata_contig40150:830..1486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40150.10404.1mRNA_H-paniculata_contig40150.10404.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40150 275..1486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40150.10404.1 ID=prot_H-paniculata_contig40150.10404.1|Name=mRNA_H-paniculata_contig40150.10404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MDAAATKDYQAIVGSLIFLTHCTRFDICFSVIQAARFMSAPTQQHLVAAK
RILRYLRGYPDIPTTYSRSKLEVVDFSNALYRTRSTTGMMPFFANGSVYF
SSRLQKITATSTTEAELTALAACAKEGIYLLGICRQLDLQINSCQIRSDN
IGILHLAANSNYSSRSKHLAIRFAEIRDWTRSKQLIVDHVSSSDQLADIL
TKQCERVTFARLCSKISIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like