mRNA_H-paniculata_contig40036.10385.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig40036.10385.1
Unique NamemRNA_H-paniculata_contig40036.10385.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A6B7IK16_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7IK16_9PHAE)

HSP 1 Score: 616 bits (1589), Expect = 1.900e-222
Identity = 313/324 (96.60%), Postives = 320/324 (98.77%), Query Frame = 1
Query:    1 MSIISEHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGWFM 972
            MSIISEHINLFSNS+FVSCFFSTLAYWT+LSMKDS +LRTIGKITSRFATLSIFILL DRWVEFGYFPLSNLYESLLFLSCLLL VYQVLEYKI+TP+FGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIY+DEQA ILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFP+LIASLGFFVVWICYLGVNFLGQGLHSYGWFM
Sbjct:    1 MSIISEHINLFSNSIFVSCFFSTLAYWTILSMKDSNILRTIGKITSRFATLSIFILLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQTPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYIDEQATILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPSLIASLGFFVVWICYLGVNFLGQGLHSYGWFM 324          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A6G6D7D1_ECTSI (Cytochrome c biogenesis protein CcsA n=7 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7D1_ECTSI)

HSP 1 Score: 555 bits (1430), Expect = 3.220e-198
Identity = 275/324 (84.88%), Postives = 305/324 (94.14%), Query Frame = 1
Query:    1 MSIISEHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGWFM 972
            MSI+SE+I+L SNSVF+SCF  T AYW+++SM+D+K+LR I KITSRFATLS+F+LLADRW+EFGYFPLSNLYESLLFLSCLLL VYQVLEYKI++P+FGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLL+VGSSLAILYLV+FLEFE+Y+R MP+R  AYEKS+R++LGLK+REEYL LGL  IY +EQ  +L IRT FLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNG+ PA+IASLGFFVVWICYLGVNFLGQGLHSYGWF+
Sbjct:    1 MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 324          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A1I9LVC5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVC5_9PHAE)

HSP 1 Score: 537 bits (1383), Expect = 4.640e-191
Identity = 267/324 (82.41%), Postives = 298/324 (91.98%), Query Frame = 1
Query:    1 MSIISEHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGWFM 972
            MS++SE++NL +NSVFVSCF  TLAYW+++ MKD+++LRTI K+TSRFAT+SIFILL DRW+EFGYFPLSNLYESLLFL+CLLL VYQVLEYKI++PIFGGIILPIVLFITAF +F LPL MQKASALVPALQSNWLMMHVSLMMLSYSLLI+GSSLAILYLV FLEFE YIR MPIR+  YEK +++ LGLK R+E+LRLGL  IY +EQ  +L IRT FLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNG+ PA+IASLGFFVVW+CYLGVNFLGQGLHSYGWF+
Sbjct:    1 MSLVSENLNLVNNSVFVSCFLCTLAYWSIIYMKDTQILRTIAKLTSRFATVSIFILLTDRWIEFGYFPLSNLYESLLFLACLLLFVYQVLEYKIQSPIFGGIILPIVLFITAFTIFNLPLAMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVGFLEFENYIRTMPIREAEYEKVMQRILGLKNRKEHLRLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKMPAIIASLGFFVVWVCYLGVNFLGQGLHSYGWFI 324          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A516ICR2_9PHAE (Cytochrome c biogenesis protein CcsA n=27 Tax=Laminariales TaxID=2886 RepID=A0A516ICR2_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 6.700e-157
Identity = 225/315 (71.43%), Postives = 265/315 (84.13%), Query Frame = 1
Query:   25 NLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGWF 969
            N+F+N +F  C  ST+ YW  L  K+ KV  T+ KITSRFATLS+F+ L +RW++FGYFPLSNLYESLLFLSC+LL V Q LE K ++ +FG II+PIVLFIT FA   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++LI+GSS AI+Y+  FLE E+YI+ +P+R   YEK +RK L L T+ ++L LGLD IY +E+  ++  RT FLYNID+WS+R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVGLNG+ PAL+AS+GFFVVWICYLGVNFLGQGLHSYGWF
Sbjct:   14 NIFNNILFACCLVSTIFYWFSLGFKNIKVFSTLAKITSRFATLSLFVFLLNRWIQFGYFPLSNLYESLLFLSCILLFVSQALESKTQSLLFGCIIVPIVLFITGFAALTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILIIGSSFAIVYVGSFLELEDYIKTIPVRAAEYEKHMRKTLNL-TKSQFLYLGLDVIYNEEEDIVINNRTKFLYNIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGLNGKKPALLASIGFFVVWICYLGVNFLGQGLHSYGWF 327          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A8F0F9V5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9V5_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 7.780e-156
Identity = 219/313 (69.97%), Postives = 267/313 (85.30%), Query Frame = 1
Query:   31 FSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGWF 969
            F+N +F+SC  ST+ YW  L  K+ K+  ++ K+TSRFA+L +F+ L++RW+E GYFPLSNLYESLLFLSC+LL VYQ+LEYK ++ +FG II+PIVLFIT FA   LPLEMQKA+ALVPALQSNWLMMHVSLMMLSY++LI+GS+ +I+Y+  FLE E+YI+ +P+R   YEK +RK L L TR ++L LGLD IY +E+  ++  RT FLY+ID+WS+R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVGLNG+ PAL+AS+GFFVVWICYLGVNFLGQGLHSYGWF
Sbjct:   16 FNNILFISCLVSTVFYWFSLGFKNIKIFGSLAKVTSRFASLILFVFLSNRWLESGYFPLSNLYESLLFLSCILLFVYQILEYKTQSSLFGCIIVPIVLFITGFAALTLPLEMQKANALVPALQSNWLMMHVSLMMLSYAILIMGSAFSIVYVGAFLELEDYIKTIPVRAAEYEKQIRKSLNL-TRSQFLYLGLDVIYNEEEDIVINNRTKFLYHIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGLNGKKPALLASIGFFVVWICYLGVNFLGQGLHSYGWF 327          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A2R4QPY5_9PHAE (Cytochrome c biogenesis protein CcsA n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY5_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 5.030e-134
Identity = 205/336 (61.01%), Postives = 250/336 (74.40%), Query Frame = 1
Query:   16 EHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLK-----TREEYLR-------------LGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGWF 969
             + NL +NS+F+  F ST  YW  LS K   +  TIGKITSRFATLSIF+ L  RW+++GYFPLSNLYESLLFLS +LL +YQ LE K ++PIFGGI+LP+VL I+ F+   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L++GS+ +I+YLV  + F   +  +  R   Y++ +R  +        TRE+Y               + L+ I+++++A     RT FL  +D WS R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVG+ G+ PA +ASL FFVVWICYLGVNFLGQGLHSYGWF
Sbjct:    5 NYCNLLNNSLFILVFISTALYWFRLSFKSITIFNTIGKITSRFATLSIFLFLLIRWIDYGYFPLSNLYESLLFLSFILLFLYQFLESKAQSPIFGGIVLPLVLLISGFSELTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTSIVFLYNLESVEKRYFDYQEFMRGLINFTRGMNLTREDYQTRSSIQSPSACCQIISLNNIFLEQEALAQSARTNFLSQLDKWSSRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGVTGKGPACLASLAFFVVWICYLGVNFLGQGLHSYGWF 340          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A1L2F1W2_9PHAE (Cytochrome c biogenesis protein CcsA n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1W2_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 1.660e-132
Identity = 208/337 (61.72%), Postives = 249/337 (73.89%), Query Frame = 1
Query:   16 EHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLK-----TREEY-LR------------LGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGWFM 972
             + NL +N +F   F ST  YW  LS K   +   IG+ITSRFAT++IF+ L  RWVE+GYFPLSNLYESLLFLS +LL  YQ LE K ++PIFGGIILPIVL I+ FA   LPLEMQKA ALVPALQSNWLMMHVSLMMLSY++L++GS+ +I+YLV  L F   IR    R   Y++ +R  + L      TRE+Y +R            + L+ I+++++A     RT FL  +D WS R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVG+ G+ PA +AS+ FFVVW+CYLGVNFLGQGLHSYGWFM
Sbjct:    5 NYFNLLNNILFFLVFISTAIYWFRLSFKFVTIFNIIGEITSRFATINIFLFLLIRWVEYGYFPLSNLYESLLFLSFILLFSYQFLESKAKSPIFGGIILPIVLLISGFAELTLPLEMQKAGALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTLLVFSYTIRPFEKRYFDYQEFMRGLVNLAKGMTLTREDYKIRSSIQSAYACPEIISLNNIFLEQEAFAESARTNFLSQLDKWSSRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGVTGKGPAFLASIAFFVVWVCYLGVNFLGQGLHSYGWFM 341          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A8F0F862_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F862_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 2.990e-127
Identity = 199/329 (60.49%), Postives = 248/329 (75.38%), Query Frame = 1
Query:   16 EHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLR------LGLDRIYVDEQAA------ILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGW 966
             + N+F NS+F+  F S++ YW  L +   K+L T+ K T+R A LS+FI LA RW  +GYFPLSNLYESLLFL+CLL LV+Q+LEY+ ++  FG IILPI+LFIT+FA   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L++GS  +I++L+ FL   +      I K  +  S + E+ LK  E++ +      +    I ++E         +LKI+  FL  +D+WS+R+ISLGFP LTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLHVRLIVG +G+ PA++ASLGFFVVWICYLGVNFLGQGLH+YGW
Sbjct:    5 NYFNIFKNSLFICLFISSIFYWVSLRITKFKMLYTVAKFTARIANLSLFIFLATRWGNYGYFPLSNLYESLLFLACLLSLVHQILEYQTQSKFFGTIILPIILFITSFADLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLLGSLFSIIFLITFLPLPK--ESSSITKDFF--STQSEIALKIEEDFQKYLNSNSVEAGGIQINESIQKYYDLNLLKIK--FLITLDNWSYRTISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHVRLIVGWSGKGPAILASLGFFVVWICYLGVNFLGQGLHTYGW 327          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A8F0FAP1_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP1_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 6.070e-126
Identity = 194/320 (60.62%), Postives = 240/320 (75.00%), Query Frame = 1
Query:   16 EHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRL--GLDRIYVDEQAAILKIRTT-FLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGW 966
             + N FSNS+F+    ST+ YW  L            K+ SR AT+ +F+ L  RW++ GYFPLSNLYESLLFLSC++L VYQ +EYK ++ IFG I+LP+VLFIT FA   LPLEM+KASALVPALQSNWLMMHVSLMMLSY++LIVGS ++IL+L++FL   +   +      +YE+  R E  ++ R+ Y      LD++   +Q  + + R   FLYN+D+W +R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI G  G+ PA++AS+GFFVVWICYLGVNFLGQGLHSYGW
Sbjct:    5 NYCNFFSNSIFIFLLISTVFYWFSLRFTKVDFYYKFAKLNSRVATIILFVFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTSYGSYEEYARAE-NIEIRDLYNVFLDPLDKMSASKQKELRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIKGWVGKGPAILASIGFFVVWICYLGVNFLGQGLHSYGW 323          
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Match: A0A2I4Q2E4_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2E4_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 1.460e-118
Identity = 185/323 (57.28%), Postives = 235/323 (72.76%), Query Frame = 1
Query:    7 IISEHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFATLSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFE---EYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGFFVVWICYLGVNFLGQGLHSYGW 966
            I+ ++   F N +F   F ST+ YW  L  +  K L    +I S FAT  +F  L +RWV +GYFP+SNLYESLLFLSCLLL+++Q+LEY+ ++ IFG ++LP +LFIT+FA   LPLEMQKA+ALVP+LQSNWLMMHVSLM+LSY++L++GS  +I++LVLFL  E   E    + I+ I  +KS+     +K  E Y+                   T FL+ +D+WS++ ISLGFP LTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI G +G+ PA++ASLGFF +W+CYLGVNFLGQGLHSYGW
Sbjct:    2 IMDDYFTGFKNILFFCLFSSTIFYWFSLKFQILKKLHDFARINSIFATFLLFFFLLNRWVTYGYFPISNLYESLLFLSCLLLIIHQILEYQTQSRIFGALLLPSILFITSFADLTLPLEMQKATALVPSLQSNWLMMHVSLMLLSYAILLLGSLFSIIFLVLFLPSERKNEINDKLKIKTIT-KKSIFAFYNIKAFEPYIP-----------------STEFLFILDNWSYKMISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHIRLIKGWSGKGPAILASLGFFFIWVCYLGVNFLGQGLHSYGW 306          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40036.10385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7IK16_9PHAE1.900e-22296.60Cytochrome c biogenesis protein CcsA n=1 Tax=Clado... [more]
A0A6G6D7D1_ECTSI3.220e-19884.88Cytochrome c biogenesis protein CcsA n=7 Tax=Ectoc... [more]
A0A1I9LVC5_9PHAE4.640e-19182.41Cytochrome c biogenesis protein CcsA n=1 Tax=Pleur... [more]
A0A516ICR2_9PHAE6.700e-15771.43Cytochrome c biogenesis protein CcsA n=27 Tax=Lami... [more]
A0A8F0F9V5_9PHAE7.780e-15669.97Cytochrome c biogenesis protein CcsA n=1 Tax=Chord... [more]
A0A2R4QPY5_9PHAE5.030e-13461.01Cytochrome c biogenesis protein CcsA n=4 Tax=Fucac... [more]
A0A1L2F1W2_9PHAE1.660e-13261.72Cytochrome c biogenesis protein CcsA n=13 Tax=Sarg... [more]
A0A8F0F862_9PHAE2.990e-12760.49Cytochrome c biogenesis protein CcsA n=1 Tax=Proto... [more]
A0A8F0FAP1_9PHAE6.070e-12660.63Cytochrome c biogenesis protein CcsA n=1 Tax=Desma... [more]
A0A2I4Q2E4_9PHAE1.460e-11857.28Cytochrome c biogenesis protein CcsA n=1 Tax=Dicty... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40036contigH-paniculata_contig40036:848..1822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score554.7
Seed ortholog evalue2.9e-155
Seed eggNOG ortholog2880.D1J757
Preferred nameccsA
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0008150,GO:0008152,GO:0009536,GO:0015886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:1901678
EggNOG free text desc.cytochrome complex assembly
EggNOG OGs2QU0T@2759,COG0755@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size975
Cds size975
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930227.1319983-CDS-H-paniculata_contig40036:847..18221622930227.1319983-CDS-H-paniculata_contig40036:847..1822Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40036 848..1822 -
1691481199.7119684-CDS-H-paniculata_contig40036:847..18221691481199.7119684-CDS-H-paniculata_contig40036:847..1822Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40036 848..1822 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40036.10385.1prot_H-paniculata_contig40036.10385.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig40036 848..1822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig40036.10385.1

>prot_H-paniculata_contig40036.10385.1 ID=prot_H-paniculata_contig40036.10385.1|Name=mRNA_H-paniculata_contig40036.10385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
MSIISEHINLFSNSVFVSCFFSTLAYWTVLSMKDSKVLRTIGKITSRFAT
LSIFILLADRWVEFGYFPLSNLYESLLFLSCLLLLVYQVLEYKIETPIFG
GIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSL
LIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLR
LGLDRIYVDEQAAILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVW
ANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPALIASLGF
FVVWICYLGVNFLGQGLHSYGWFM*
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mRNA from alignment at H-paniculata_contig40036:848..1822-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig40036.10385.1 ID=mRNA_H-paniculata_contig40036.10385.1|Name=mRNA_H-paniculata_contig40036.10385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=975bp|location=Sequence derived from alignment at H-paniculata_contig40036:848..1822- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAATTATAAGTGAACATATTAATTTGTTTAGTAATAGCGTATTCGT ATCTTGTTTCTTTTCCACTTTAGCTTATTGGACTGTTCTATCAATGAAAG ATTCAAAAGTTTTACGAACTATCGGAAAAATTACCTCTCGTTTTGCAACT CTAAGTATTTTTATTCTTTTAGCAGATCGTTGGGTTGAGTTTGGATACTT TCCTCTAAGTAATTTATACGAATCATTGCTTTTTCTATCTTGTTTACTTT TACTTGTCTATCAGGTTTTAGAATATAAAATAGAGACCCCGATATTTGGT GGAATTATTTTACCAATCGTTTTATTTATTACAGCTTTTGCCGTATTTAA GTTACCTCTTGAAATGCAAAAAGCAAGTGCTTTAGTTCCCGCGCTGCAGT CAAATTGGCTAATGATGCATGTTAGCTTAATGATGTTAAGTTATTCTTTA TTAATTGTAGGTTCATCATTAGCAATTCTTTATTTAGTTCTCTTTTTAGA GTTTGAAGAGTATATAAGAATGATGCCAATACGAAAGATTGCTTATGAAA AATCGGTTCGAAAAGAGTTAGGGTTAAAAACTAGAGAAGAATATTTACGT TTAGGATTAGATCGAATTTATGTAGACGAACAGGCTGCTATTTTAAAGAT CCGCACAACTTTTTTATATAACATAGATAGTTGGAGTTTTCGATCTATAA GTTTAGGCTTTCCTTTTTTAACAATTGGCATAATAGCAGGAGCTGTTTGG GCAAATGAGGCATGGGGCTCTTATTGGAGTTGGGATCCTAAAGAAACTTG GGCTTTAATTACTTGGTTAAATTTTGCTGCGTATTTACATGTAAGATTAA TAGTTGGTTTAAATGGTAGATTCCCAGCTCTTATAGCAAGTCTTGGCTTC TTTGTTGTTTGGATTTGTTATCTTGGGGTTAACTTTTTGGGGCAAGGTTT ACATAGTTATGGTTGGTTTATGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig40036:848..1822-

>mRNA_H-paniculata_contig40036.10385.1 ID=mRNA_H-paniculata_contig40036.10385.1|Name=mRNA_H-paniculata_contig40036.10385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at H-paniculata_contig40036:848..1822- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAATTATAAGTGAACATATTAATTTGTTTAGTAATAGCGTATTCGT
ATCTTGTTTCTTTTCCACTTTAGCTTATTGGACTGTTCTATCAATGAAAG
ATTCAAAAGTTTTACGAACTATCGGAAAAATTACCTCTCGTTTTGCAACT
CTAAGTATTTTTATTCTTTTAGCAGATCGTTGGGTTGAGTTTGGATACTT
TCCTCTAAGTAATTTATACGAATCATTGCTTTTTCTATCTTGTTTACTTT
TACTTGTCTATCAGGTTTTAGAATATAAAATAGAGACCCCGATATTTGGT
GGAATTATTTTACCAATCGTTTTATTTATTACAGCTTTTGCCGTATTTAA
GTTACCTCTTGAAATGCAAAAAGCAAGTGCTTTAGTTCCCGCGCTGCAGT
CAAATTGGCTAATGATGCATGTTAGCTTAATGATGTTAAGTTATTCTTTA
TTAATTGTAGGTTCATCATTAGCAATTCTTTATTTAGTTCTCTTTTTAGA
GTTTGAAGAGTATATAAGAATGATGCCAATACGAAAGATTGCTTATGAAA
AATCGGTTCGAAAAGAGTTAGGGTTAAAAACTAGAGAAGAATATTTACGT
TTAGGATTAGATCGAATTTATGTAGACGAACAGGCTGCTATTTTAAAGAT
CCGCACAACTTTTTTATATAACATAGATAGTTGGAGTTTTCGATCTATAA
GTTTAGGCTTTCCTTTTTTAACAATTGGCATAATAGCAGGAGCTGTTTGG
GCAAATGAGGCATGGGGCTCTTATTGGAGTTGGGATCCTAAAGAAACTTG
GGCTTTAATTACTTGGTTAAATTTTGCTGCGTATTTACATGTAAGATTAA
TAGTTGGTTTAAATGGTAGATTCCCAGCTCTTATAGCAAGTCTTGGCTTC
TTTGTTGTTTGGATTTGTTATCTTGGGGTTAACTTTTTGGGGCAAGGTTT
ACATAGTTATGGTTGGTTTATGTAAATGTCAATTATAAGTGAACATATTA
ATTTGTTTAGTAATAGCGTATTCGTATCTTGTTTCTTTTCCACTTTAGCT
TATTGGACTGTTCTATCAATGAAAGATTCAAAAGTTTTACGAACTATCGG
AAAAATTACCTCTCGTTTTGCAACTCTAAGTATTTTTATTCTTTTAGCAG
ATCGTTGGGTTGAGTTTGGATACTTTCCTCTAAGTAATTTATACGAATCA
TTGCTTTTTCTATCTTGTTTACTTTTACTTGTCTATCAGGTTTTAGAATA
TAAAATAGAGACCCCGATATTTGGTGGAATTATTTTACCAATCGTTTTAT
TTATTACAGCTTTTGCCGTATTTAAGTTACCTCTTGAAATGCAAAAAGCA
AGTGCTTTAGTTCCCGCGCTGCAGTCAAATTGGCTAATGATGCATGTTAG
CTTAATGATGTTAAGTTATTCTTTATTAATTGTAGGTTCATCATTAGCAA
TTCTTTATTTAGTTCTCTTTTTAGAGTTTGAAGAGTATATAAGAATGATG
CCAATACGAAAGATTGCTTATGAAAAATCGGTTCGAAAAGAGTTAGGGTT
AAAAACTAGAGAAGAATATTTACGTTTAGGATTAGATCGAATTTATGTAG
ACGAACAGGCTGCTATTTTAAAGATCCGCACAACTTTTTTATATAACATA
GATAGTTGGAGTTTTCGATCTATAAGTTTAGGCTTTCCTTTTTTAACAAT
TGGCATAATAGCAGGAGCTGTTTGGGCAAATGAGGCATGGGGCTCTTATT
GGAGTTGGGATCCTAAAGAAACTTGGGCTTTAATTACTTGGTTAAATTTT
GCTGCGTATTTACATGTAAGATTAATAGTTGGTTTAAATGGTAGATTCCC
AGCTCTTATAGCAAGTCTTGGCTTCTTTGTTGTTTGGATTTGTTATCTTG
GGGTTAACTTTTTGGGGCAAGGTTTACATAGTTATGGTTGGTTTATGTAA
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