prot_H-paniculata_contig40023.10378.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40023.10378.1
Unique Nameprot_H-paniculata_contig40023.10378.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
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BLAST of mRNA_H-paniculata_contig40023.10378.1 vs. uniprot
Match: A0A6H5KAF3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.720e-8
Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 0 
Query:    3 EELRENFSEPYIKNAHPTFQALIKSVEKCKQLQCALVIDGSPSGAWSIFEDWFRDTTSGERTRVRKEFENLAVQPNETPHEFLARSFVIVQRMKEIGVDMTETKVHHQIVRSLPHHFAIAKHMMLMKKNLSTKKLEEGVRTA 144
            EEL    S   ++    ++  LI SV     L   ++ DGSPSG W IF +++      E+ R+  ++  L ++  ETP ++  R  V+  R+   GV  ++   +  +V  L   + + K + +     S +K+E+GVR A
Sbjct:   60 EELPRVHSSDSVEKTITSWNLLITSVTYMPILT-QIIADGSPSGGWKIFLNYYEPRARAEKERLSSQYHGLEMKVGETPQDYFGRFAVLRSRLAPHGVIFSDEDANAHMVYHLSDEYMMEKILTMSPIPRSREKIEKGVRDA 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40023.10378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAF3_9PHAE6.720e-827.46Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 43..137
e-value: 8.3E-12
score: 44.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40023contigH-paniculata_contig40023:1224..1658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40023.10378.1mRNA_H-paniculata_contig40023.10378.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40023 1224..1658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40023.10378.1 ID=prot_H-paniculata_contig40023.10378.1|Name=mRNA_H-paniculata_contig40023.10378.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
TEEELRENFSEPYIKNAHPTFQALIKSVEKCKQLQCALVIDGSPSGAWSI
FEDWFRDTTSGERTRVRKEFENLAVQPNETPHEFLARSFVIVQRMKEIGV
DMTETKVHHQIVRSLPHHFAIAKHMMLMKKNLSTKKLEEGVRTAK
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