mRNA_H-paniculata_contig40.10368.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40.10368.1 vs. uniprot
Match: D7FMA3_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA3_ECTSI) HSP 1 Score: 1062 bits (2747), Expect = 0.000e+0 Identity = 1058/2924 (36.18%), Postives = 1364/2924 (46.65%), Query Frame = 1
Query: 1 DGRHNAMYRQALILHGQGGPHSDEWARAKQLYDNVLSDGYVG--RASSTFKSPIRFLCLKNMADMFEREGDDVMALQGNIAAAEEDETDLVVWLKMARIARRGGVLNLARLALERLLANREDHVLALRTLKDILLEIGDDAAFRQVQQNAPLPISITAQPTLLPHSLFHSVIERSLELPSWERLGVLLLDIQNSVLGNNTNATDEVALLPEAPEFLLPSHTPPTLSTPVRVLLAEEYRESDNLGANSNGPTAVHHSSDGQRRGTDRPTDGPTTDSSSRDDAKIADSASGSEVPVDAGRKATVLAGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRLWRRRRPAVLQAMEELSDGSSTDDXXXXXXXXXXXXXXXXXXXRWGKYKR-GVERRTSGRLQKQDEMVREANVAAARENNMQFRLASLFFPGEAIVSMDKPDKESDSEDEAQRGEGQREDVREHISWWPHLA--------IADKGGEELGGGAGETGDTDEDGTALADRVLPRWKKRHGEDCCRCGGAGMLVCCDFCHLVFHPKCLEVTPALSSLFACPDCKEARHGEAANLFWELQTRNVTASFLEGGLPGLRALLRAADGRGGNAGVVDLMLRWLQAVAEAPPGELCSDRHVDGLDTE-------------PTVS--------RLATVALTIEPIVRGYLPARASWPPTVSV--TENGFSSIRPGTTQGGLELGLTCELALAEMHLDKALA--------PSPVGCSGNAGTDTTTTAGSPSTAPTLKAPAASDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGGAASGTDKSQESVHRSVEPSKYQEAAMRRHLSIADLSMMKLEPFLCSWNDDESNDNGDGKSTAGQRLLRVDSHIPWAIVVRWWWLRGLRARHAGDREAALKCFRRCEGALMVCDEKK--------GRGEEGKRGEQ--EHMEQKTAVVLPYCVVNPRIDAQVVRGVIADMELSGTSEAARAVFEGAIKVLSAQASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLGTGLVAQREGKESNSPGEGLEDDSARVTIEDKLLLGPSDGAMFSTANGAAADRRTI-TASSDQATSTVGVAELPKVSSS----DGAKAALASLLRGLESRFVEQVPLDATTRVGTARAVD-AGGAPMASDDRSEVVQAGSKSKLLVG-RACWSIRIPPHRMEELLADLLEREKAFLSKINREGALALQTSASTTSTDSNSSSAPHAASATALSRQAGSARAVKAGGELGKEARPPC--GGDIAAASDGTSSVSSGSCQQSPVLVPG----------------------HFPLAISGPGFGTHGSVFSMMLRSALIVGRYETAVLLAVRCAEHMLDLVETLSSPRGPLRV--------------------REETKRLGMVSLLLTSQMEPGGAARRQVDAATTSACSEFLAYSLSVALWATPHQIRAELFGG--PKGDDATITVTRPGRARRNSVLRCLARIIKYSMDSDNVHVLDLSVRAWHAIIAV--------------TPPVATPRPHLTMEVEEVELEPTACKSFAPFSEAEGCAMKADPFDDPANALVRCLCGIVTGRWKQAASALKGGSTPKKAWDLHAVEAIHFLTGMVKVRRSISIWGGSLLKRFIENRMQDHNHWSSQLESNGDTTANHHSEDGNHPTSSDISIGRVRR---FFSNPEELQEIMASLMGLSRLAQGNAAIPSSAALYIPTSSSF------------------PPSMNMGLRLACTLAVLAIGMSGDASQMDAPRKVELLEALHDHLRGNSDLP--------EGQPGRNGVCADGGGVFLKTSLLYLASPEVKKPSRAVEEERR-------------IQRELGSGCPSESSDEDNXXXXXXXXXXXXXDA---------------------MQXXXXXXGQ---------AGGNGNSA------------TLGERVVRAVAQCQSCLYDVAMMPSKDHRCLSTPSPPSTAAEANALYKFWESRLPNLRRTRAVRLYEAVIANAAFASPPPTRFSQVVEKHLFAAREAWEGSDGMIRAGEISKRVVGGASESEARERVGERKEQASVATGTSAPPTVKSHVGPCFGVGESIATPAAGDCSNDLRIGSIIDNDPEQAQGVEAKGSHALDPGPS-STGDVCKVRTG-GAKRWE---AGRRELGLPHD--LEAFSAVYLGLYRYLSEAKGVPSGFKYRMTKQPADEVMSDMEAALTQGVRWRVFDLRISPDRMSSWKGLAQCAARLVAIYLDAFTPTCHRLELPLTIATEHAATTKVLPENNTLKGSFEGTPLAEQRQPPEKMFPQSLASREPTLTTSEAPTLSPPPPSPVLPLVPATPGCSSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANTPSTMDIDEAAEVPAPIPTPTG-VVQPKAVDAYERSRLSPDTTAVSRCPTGAAA----EASSVQESMVEVETQATTDIIHSAHRHAATATAPAESLSSIDERA-SGPDFPGTILESRPGDWVALPSCDALERSTTPTPQLASTGAELEHKPEAGKIDEVASTPSTTEQHPTVTAQTTQSPTHFGSQALQEISFGEHTDSVFGLRATPGPDISPFFNGTALDSHAARAGVVVRDGGWGAIGVGSRVAAIAEGLRRAGIEGRARTATEGAALRALGTRILDGTATKEEWDACLGHACIAAAATLAERSFAVWRTLAEASMARCRQREGHQDGVR------------GSDESEEEATVELAECCEEEAFMTYMIARDVWADNEDEDPTSARTATSTDDINGEDVTIPCGHPTAA---------GLEVSAQRRLLEKALALLRRAKYLRTTDGKG 8061
+ RHNA+Y QAL LHG+G PHSD WARAK+LYD V+SD + R++S+F +P+RFLCLKN+ADM EREGD AL+ +AAA+ED TD+ VW+KMAR++R G+ NLARLALERLL DHVLALRTLKD+L EIGD AA R+ Q A S +E +R GV AT A G + HS Q QR R RRP+V +AME SDGS XXXXXXXXX G+ ERRTS R QKQ E +REA+VAAARE++++FR+ASLF E DK D + A Q+E R +WWP+LA + E GG G+ G+ +E+ ALA ++LPRWK+RH DC RCG G+++CCDFCHLV+HP+CLEVTP L+SLFAC DCKE EAA L WEL+ R+ AS G GL+ LLRAADGR GNAGVVDLMLRWL+ V AP +LC + D P + +LA VAL +EPIVRGYLP R +WP ++V + PG G ELGL CELALAEM +DKAL+ P G S + A SP+ AP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + RS E + + + L+ AD +M++LEP+ + ++ D+GDG + G+ + PW +VVRWWWL+G+RAR G E AL+ F CE AL ++ G+E ++G++ + E++ AV+LPYC V+PRID QVVRG+I D+ELSGTSEAAR F AI +LS A+ XXXXXXXX A E + ++P D + V+ E P+ A + G R +A+ D G K SS D A ALA ++RGLESRFV + PL + G+ A A A +A + V A KS G R W+ R+ R EELL+DLLE+EKAFL+++NR+GA AL+ A+ P+AA P + A++ G S +++ H PL +SGPG G SVFSMMLR A ++ R+E AVLLAVRCAEH LD + L+SP+GPL + R ++ LG V LLLTS+ GA RR VDAA TSA +EFLA++L+V +WA P RAELFG R SVLRCLAR++++SM+ DN VL+L V AW AI AV T P M VE ++ + S A+ A A+ LVRCLCG+V GRWKQ A A K KAW LHA+EA+H L ++ +S+S S K + EN + N + S+ G S+ + RR FF N EL+E++ +LMGLS L G P++A PP +G++L C+LAVL +G+S AS +DAPR+V L+E LH HL+G EG+ G GVCADG GVFLKT+LLYL+S +V R E+ER+ + R++GS +E D XXXXXXXXXXXXX M+ G +GG G S LGERV+RA++QCQ+CLYDVAM P +DHRCL+ PSPPSTA EA ALY WESRLP+LRR+ A+RL EAV A+AAF+SPP TRFS+ VE H+F A + +RA E + V G+S S + G R TG++ P V ++ G G + PAA + + D + + G+ A+ G D + R G G +R + AGR G P D +EAF VYLG Y+ L EAKGVPSGF+ TK D SD EAAL QG+RWRV DL PDRMSSWKGLAQCA RL A+YLDAF+P+CHRL +PL +AT A P+A+ R P+S P+ PG + +A +P + AA P P+P V VDA + S P G+ A E+ + +++ A + AT + ++ G D P +++ GD A+ A P + ++ G+ +T + F GLR TPGPD+ PFF GT+LD+ AAR +DG G G+R+AAIAEGLRR G G ARTA E AA + TRIL G+AT EEW ACLGHA IAAA AE++F+ W+ LAE ++A+ R RE + G + G D E A +LAECCEEEAFM +M+ARDVW E A TAT++ VT PTAA GLE +RRLLE +L+LL+RA+ LR T G+G
Sbjct: 36 EARHNAVYEQALALHGEGAPHSDAWARAKKLYDTVISDEPMEDKRSASSFGTPVRFLCLKNLADMVEREGDKARALELQVAAADEDATDVAVWMKMARLSRAAGLSNLARLALERLLEVNGDHVLALRTLKDVLSEIGDVAACREAQAAAXXXXXXXXXXA--------SGLEGG---EGGDRNGV--------------GATTAAA-----------------------------------------GNDSHEHSKQEQHN--------------------------------------------------------------------------------------QR--RLRRPSVEKAMEWYSDGSXXXXXXXXXXXXXGGKGKGKGKLNGGRQSELRAERRTSARRQKQVE-IREADVAAAREDDVEFRVASLFLTAEEASHDDKGDGGLGAAAAADEEGEQQETER---AWWPNLARGAGRGARVDGSAAAEGGGACGDAGELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKE----EAAILEWELKGRDDAASGAVAG--GLQELLRAADGRAGNAGVVDLMLRWLKGVTTAPTDDLCLEAAYCAADNRARGGGXXXXXXGVPQTTAGVPSGGYQLAAVALAVEPIVRGYLPTRFTWPALLAVGPPPATVDAAAPGEDDGP-ELGLACELALAEMRVDKALSLMRQRQQQQRPAGGSKS-------NAHSPAGVQP-SAPVGGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLRRSPEDLAREASDI---LADADRAMLQLEPWCLAIDNSNLGDDGDGAAGHGE-----SNTAPWVLVVRWWWLKGIRARQGGQAEEALEHFHLCERALRGRGREQRAQQGSGASSGQEEEKGDEFNDEDEEEVAVLLPYCSVHPRIDLQVVRGLITDVELSGTSEAAREAFSSAILLLSKCAAVRNVDTAAGQRATVTAGTGTGATAEAARPGAASQSGAYGKSGGTPGXXXXXXXXXXXXXVDAAVTESRVGDAP-----DSQSVVSAESN----PAGSARLAPGGGQGNGERCFPSAAVDGTAQPGGTGGGVKASSPPQQRDQALKALACVMRGLESRFVARAPLASPPFQGSISAPQSAAAAAVAGGPGAPGVTAEPKSATAAGNRGGWTARVLSSRAEELLSDLLEKEKAFLAQVNRDGARALERLAADLDK-------PNAAXXXXXXXXXXXXXXXXXXARTSPAPATPVITVPAVLASAGGRSDIAAPRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHVPLRLSGPGLGDQNSVFSMMLRGASLLDRHEIAVLLAVRCAEHFLDASDVLASPKGPLGIGGXXXXRRGSPAKRRAGAAGRSGSEGLGAVHLLLTSRSP--GADRRAVDAAVTSATAEFLAHALAVVVWAVPCAARAELFGDGXXXXXXXXXXXXXXXXXXRASVLRCLARLMRHSMEDDNTRVLNLCVIAWQAIAAVAHVPNNASTRTDTETGKPLPPEGRSAMGVEAELVQSSHDDEAGGVSTADCGAFAAESV---VRGLVRCLCGVVVGRWKQTAKARK------KAWVLHAMEAVHALVRTLEYLQSVSC---SNAKPYTENTNLTDSDSVIGPRLNPGVSGVAGSDSGVITPSASVGANPARRSSSFFFNAGELREVVKALMGLSNLPDGPT--PATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGGGLGVKLTCSLAVLVVGLSDAASWLDAPRRVGLVETLHAHLKGKPGSAAVTLGGALEGRAGYGGVCADGEGVFLKTALLYLSSQQVASAVRKEEQERQSPGGENRDNDDVGLSRDVGSEDGNEDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRAKDREMERLTSYNGSPKQGDAEPASGGAGXSRGKGRRQPSKRAERLGERVLRALSQCQACLYDVAMAPCEDHRCLTPPSPPSTALEARALYVCWESRLPDLRRSHALRLLEAVAAHAAFSSPPNTRFSKAVETHVFLAWSPLATARADMRAVEKDGQGVQGSS-SRSSGGPGSRVLSFLHGTGSALPDGVFDNMPVASGGGNGCSAPAA---TGTTIAAAAAPKDGTRDVNSDRSGASAVSAGTEREKRDTHEERRGPGTERGDPQSAGRWG-GAPVDPEMEAFRRVYLGFYKNLVEAKGVPSGFRSCATKSIGDA--SDTEAALMQGIRWRVLDLSFCPDRMSSWKGLAQCACRLAALYLDAFSPSCHRLGMPL-MATAAPAR----------------KPMADSRAAGRGNPPRS----------------------------PSAPGTKAGGEGAEAIDSS---------------------------------------AAESPGSCP---AAVAPGDTPSPNADAVMSDVVDAVDGGS--------SGVPAGSPAPGRKESGGGTGXXXXXXXXSPSNVTPPAPANDATMAIEVAGTRNPEQAGLGGDDIPNLVIDIGDGDTPAVADAAA------PIAAGGTFSGSMDVSTGRGRAPSSLATAXXXXXXXXXXXXXXXXXXXXXXRTASPPPF-----QALGLRGTPGPDLGPFFRGTSLDARAAR-----KDGKGGGRRGGTRLAAIAEGLRRLGASG-ARTAAESAAAETMATRILGGSATHEEWAACLGHASIAAAVGAAEKAFSAWKALAEEALAKAR-REALRGGGKXXXXXXXXXXXXGLDACETAAR-DLAECCEEEAFMKFMLARDVWPGAE-----PASTATASAAGGAASVTAAGPAPTAATAPAARVPAGLEAGGRRRLLESSLSLLQRAQRLRETGGEG 2620
BLAST of mRNA_H-paniculata_contig40.10368.1 vs. uniprot
Match: A0A6H5KF24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF24_9PHAE) HSP 1 Score: 569 bits (1467), Expect = 5.450e-164 Identity = 655/2034 (32.20%), Postives = 860/2034 (42.28%), Query Frame = 1
Query: 5032 LAVLAIGMSGDASQMDAPRKVELLEALHDHLRGNSDLP--------EGQPGRNGVCADGGGVFLKTSLLYLASPEVKKPSRAVEEERR-------------IQRELGS----------------------------------GCPSESSDEDNXXXXXXXXXXXXXDAMQXXXXXXGQAGGNGNSAT------LGERVVRAVAQCQSCLYDVAMMPSKDHRCLSTPSPPSTAAEANALYKFWESRLPNLRRTRAVRLYEAVIANAAFASPPPTRFSQVVEKHLFAAREAWEGSDGMIRAGEISKRVVGGASESEARERVGERKEQASVATGTSAPPTVKSHVGPCFGVGESIATPAAGDCSNDLRIGSIIDNDPEQAQGVEAKGSHALDPGPS-STGDVCKVR----TG-----GAKRWEAGRRELGLPHDLEAFSAVYLGLYRYLSEAKGVPSGFKYRMTKQPADEVMSDMEAALTQGVRWRVFDLRISPDRMSSWKGLAQCAARLVAIYLDAFTPTCHRLELPLTIATEHAATTKVLPENNTLKGSFEGTPLAEQRQPPEKMFPQSLASREPTLTTSEAPTLSPPPPSPVLPLVPATPGCSSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANTPS-TMDIDEAAEVPAPIPTPTGVVQPKAVDAYERSRLSPDTTAVSR---CPTGAAAEASSVQESMVEVET-QATTDIIHSAHRHAATATAPAESLSSI--DERA---SGPDFPGTILESRPGDWVALPSCDALERSTTPTPQLASTGAELEHKPEAGKIDEVASTPSTTEQHPTVTAQTTQSPTHFGSQALQEISFGEHTDSVFGLRATPGPDISPFFNGTALDSHAARAGVVVRDGGWGAIGVGSRVAAIAEGLRRAGIEGRARTATEGAALRALGTRILDGTATKE-------------EWDACLGHACIAAAATLAERSFAVWRTLAEASMARCRQREGHQDGVRGSD-----------ESEEEATVELAECCEEEAFMTYMIARDVWADNEDEDPTSARTATSTDDINGEDVTIPCGH------------PTA---AGLEVSAQRRLLEKALALLRRAKYLRTTDGKGSPLGCNGFSSAHRSSXXXXXXXXXSSPYSSDIDSHRKREHSGKGSRSSDGEKGQRTDEGGDMKRQKVDSRPMKVESGVLRENVSGVGKA--------------------------------------HDGCVVE----------RREGGGKGVGDRQGEEDDLLPWQIPFVMGRLCARLGRHPKMILENLSQALRLAKDEKVPLEDELEALCRLHAARAEFILSGDDEHFLSVAHLVESHTFDDDXXXXXXXXXXXSPVPALGKSVGHSDTIAQGLQNAINKLTQLNDTPSSLTAVSQATTGVSAPEVVISDVPSTVVGLAPPSGDRSVKKSVDRSSVW-----PPTQNEVIENVHVRRLAALENCLVAFESCLKRHKWQHTAIYGIANVLLKGEAIAVEARKTYRPGG-----ITGTQERRTFGAKAARLVMSRLFEKRPQHQWLGVIMADGMAGPGLAILGMRRRKLRALRRKYLGLYVDLLEVTKGTVSLHNLHKRARAAKESREEVAWVQERVLRALLTVLQSEVRTPIPAPAQSTLQLQAATSAPLASPPTAXXXXXXXXXXASAALGLVSVETATQRLASTLSSGVATSVSRAAVDESTSPPQDPYAKPTASTPGHVGIVAGGNAATTAGNIVGTXXXXXX--QGPGGEKPDT-VMPLAAPTVVSGSLGETERPQSQQELQQAPQKALGTLAGAGHAVPGHVMAVAPTDLSGSPPEANASTSAATTASTSTGVPTGAGGIVVAQEKTVLERAWDLYLKLLEL--TGRQG---ALPMRS--------SLLGDAEGMLIQAWEAFGAANPAMLDMVEMQSPPRLLESMQAGRSGXXXXXXXXRGTKMQRAQACCNVLWPDRLGKGKVAKSKLRLKRPATGPSQ---SAANRAAPKPRVRP 10542
+AVL +G+S AS +D R+V L+E LH HL+G EG+ G GVCADG GVFLKT+LLYL+S +V R ++ER + R+ GS + D++ DA + XXXX GNG LGERV+RA++QCQ+CLYDVAM+P +DHRCL+ PSPPSTA EA ALY WESRLP+LRR+ A+RL EAV A+AAF+SPP TRFS+ VE H+F A + + A E R V G+S S + G R TG++ P V ++ G + PAA + + D Q + G+ + G D + R TG A+RW G + ++EAF VYLG Y+ L EAKGVPSGF+ TK D SD EAAL QG+RWRV DL PDRMSSWKGLAQC+ RL A+YLD+F+P+CHRL +PL +AT A T + + G P P K + + + + + +E+P P V P + S+ XXXXXXXXXXXXXXXX + P+ D A EV T + + + S L DT + T A A ++V T + I + A +AT S S + D R+ SG D G S + + + DA+ + +GA + G D+ A Q SP F GLR TPGPD+ PFF T+LD+ AAR +DG G G+R+AAIAEGLRR G ARTA E AA + TRIL G+AT E EW ACLGHA IAAA AE+ F+ W+ LAE ++A+ R RE + G +G ++ E A +LAECCEEEAFM +M+ARDVW E T+A A P A AGLE +RRLLE +L LL+RA+ LR T G+ S SP S+ S R R + V SRP ++ L VG HD V +L WQ+PFVMGRLC++LG+ P+ +LE L++ALRLA+ E VPLEDELEALCRLH+ARAE +LSGD F +V VE+ F +D G G S V APP S P Q V ++ RRL+ LENCL AFESCL +K QHTAI+ +AN L +G AIA +AR + +Q R +G +AA + LFEKR Q L + +DG+ GPGLA+L RRRKL+AL+RKY LYV+LL+ T T +L L +RA+ +E+REEV WVQ RVLRALL +L+S++ + AQ L AA XXXXXXXXXX N + T G++ GT PG +P M A P V S V A P + GG EK LE AW+LYL++++L T R G + +R+ +LLGDAE +L+++W+AFGAAN A+L++VE+Q+P L S G G ++RAQACC+V WPD+ G+GK + S+ANRAAP+P+V+P
Sbjct: 1 MAVLVVGLSDAASSLDTRRRVGLVETLHAHLKGKPGSAAVTLGGALEGRAGYGGVCADGEGVFLKTALLYLSSQQVASAVREEDQERLSPGGQNSDNDDVGLYRDAGSEDDXXXXXXXVVIDVEGTEDGXXXXXXXXXXXXXXXXXXTKDKEMGRLTSYNGSPKQGDA-ESAXXXXXXXXGNGRRPPSKRVERLGERVIRALSQCQACLYDVAMVPCEDHRCLTPPSPPSTALEARALYVCWESRLPDLRRSHALRLLEAVAAHAAFSSPPDTRFSKAVETHVFLAWSPLATAGADMGAVEKDGRDVQGSS-SRSSSGPGSRVLSFLRGTGSALPGAVFDNMPFVSDGGNGGSAPAA---TGTTIPAAAASKDGTQDVNSDRGGASVVSAGTEREKRDTHEERRRPGTGRGNPQSAERWGGGP----VDPEMEAFRRVYLGFYKNLVEAKGVPSGFRSCATKSIGDA--SDTEAALMQGIRWRVLDLSFCPDRMSSWKGLAQCSCRLAALYLDSFSPSCHRLGMPL-MATAAPAQTPMADS----RAEGRGNPPRSSSAPGTKAGGEGVEAID--TSAAESPGSCP---------VAVAPEDTPSSYADAVMSDVVVAVDGGSSGVPAGSPSPGRNXXXXXXXXXXXXXXXXPSNVTPPAPASDATMAIEVAG-----TRNSEQAGLGGDDISNLVIDTGDSDKPAVADTAAPIAAGGAVSGSMDVSTGRGGVPRILATAAAAGSATVAPRSTSVVAGDGRSGGGSGVDLLGKRRLSPAYTGLVIDTGDAVL-------PVDGSGARKRERQGGGGPDKEA--------------QRMASPPPF---------------HALGLRGTPGPDLGPFFRDTSLDARAAR-----KDGKGGGRRGGTRLAAIAEGLRRLAASG-ARTAAESAAAETMATRILGGSATHEVRLLVSCVSEVCAEWAACLGHASIAAAVGAAEKGFSAWKALAEEALAKAR-REVFRGGGKGXXXXXXXXXXXXVDACETAARDLAECCEEEAFMKFMLARDVWPGAELASTTTASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAARVPAGLEAGGRRRLLESSLTLLQRAQRLRETGGEXXXXXXXXRSP---------------SPPSTASSSPRCRRP---------------------LTGSPVSSRPRSPKT--LAREAFAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFPHDSARVRGAXXXXXXXXXXXXXXXXXXXXXXXXXGVLRWQVPFVMGRLCSQLGKDPRAVLEKLAEALRLAQGEHVPLEDELEALCRLHSARAEMVLSGDSARFAAVVSTVEAFPFREDDTDG-------------GDEEGGS------------------------------------------------VDFAPPPAIFSTSPXXXXXXXXXXXXAPVGQGAVEMDISARRLSVLENCLDAFESCLDENKGQHTAIFAMANALYRGVAIADDARLVLSSAEAMSLLVRNSQRGRAYGPQAALQTLKPLFEKR-QQLLLAMSASDGVVGPGLALLSSRRRKLQALKRKYYALYVELLQATNNTGTLQGLLRRAKGVRETREEVVWVQRRVLRALLAILRSDIDSR----AQKRLHGVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------XXXXXNMSATTGSLTGTEAEVLRAVDNPGAAQPQARAMTGAVPAPVGQSK--------------------------------EVAAATPXXXXXXXXXXXXXXAKP-------------GG----DEKLALESAWNLYLQVVDLEPTTRSGGGISSSLRAGQSSSSGVTLLGDAEEVLVKSWQAFGAANAAVLELVELQNP---LPS-----PGKGAGPDTGGGMLLRRAQACCHVFWPDKQGRGKTSXXXXXXXXXXXXXXXXLASSANRAAPRPKVQP 1751
BLAST of mRNA_H-paniculata_contig40.10368.1 vs. uniprot
Match: A0A6H5KH56_9PHAE (PHD domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH56_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 6.140e-158 Identity = 669/1748 (38.27%), Postives = 843/1748 (48.23%), Query Frame = 1
Query: 274 LKMARIARRGGVLNLARLALERLLANREDHVLALRTLKDILLEIGDDAAFRQVQQNA-------------------PLPISITAQPTL---------------LPHSLFHS--------VIERSLELPSWERLGVLLLDIQNSVLGNNTNA--TDEVALLPEAPEFLLPSHTPPTLSTPVRVLLAEEYRESDNLGANSNGPTAVHHSSDGQRRGTDRPTDGPTTDSSSRDDAKIADSASGSEVPVDAGRKATVLAGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRLWRRRRPAVLQAMEELSDGSSTDDXXXXXXXXXXXXXXXXXXXRWGKYKR-GVERRTSGRLQKQDEMVREANVAAARENNMQFRLASLFFPGEAIVSMDKPDKESDSEDEAQRGEGQREDVREHISWWPHLA--------IADKGGEELGGGAGETGDTDEDGTALADRVLPRWKKRHGEDCCRCGGAGMLVCCDFCHLVFHPKCLEVTPALSSLFACPDCKEARHGEAANLFWELQTRNVTASFLEGGLPGLRALLRAADGRGGNAGVVDLMLRWLQAVAEAPPGELCSDRHVDGLDTE-------------PTVS--------RLATVALTIEPIVRGYLPARASWPPTVSV--TENGFSSIRPGTTQGGLELGLTCELALAEMHLDKALA--------PSPVGCSGNAGTDTTTTAGSPSTAPTL-----KAPAASDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGGAASGTDKSQESVHRSVEPSKYQEAAMRRHLSIADLSMMKLEPFLCSWNDDESNDNGDGKSTAGQRLLRVDSHIPWAIVVRWWWLRGLRARHAGDREAALKCFRRCEGALMVCDEKKGRGEEGKR----------------GEQEHMEQKTAVVLPYCVVNPRIDAQVVRGVIADMELSGTSEAARAVFEGAIKVLS-------AQASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLGTGLVAQREGKESNSPGEGLEDDSARVTIEDKLLLGPSDGAMFSTANGAAADRRTITASSDQATSTVG------VAELPKVSSSDGAKAALASLLRGLESRFVEQVPLDATTRVG------TARAVDAGGAPMASDDRSEVVQAGSKSKLLVG-RACWSIRIPPHRMEELLADLLEREKAFLSKINREGALALQTSASTT-----------------------STDSNSSSAPHAASATALSRQAGSARAVKAGGELGKEARPPCGGDIAAASDGTSSVSSGSCQQSPVLVPGHFPLAISGPGFGTHGSVFSMMLRSALIVGRYETAVLLAVRCAEHMLDLVETLSSPRGPLRV--------------------REETKRLGMVSLLLTSQMEPGGAARRQVDAATTSACSEFLAYSLSVALWATPHQIRAELFGG------PKGDDATITVTRPGRARRNSVLRCLARIIKYSMDSDNVHVLDLSVRAWHAIIAVTP-----------PVATPRPHLTMEVEEVELEPTACKSFAPFSEAEGCAMKADPF-----DDPANALVRCLCGIVTGRWKQAASALKGGSTPKKAWDLHAVEAIHFLTGMVKVRRSISIWGGSLLKRFIENRMQDHNHWSSQLESNGDTTANHHSEDGNHPTSSDISIGRVRR---FFSNPEELQEIMASLMGLSRLAQG 4938
+KMAR++R G+ NLARLALERLL DHVLALRTLKD+L EIGD AA R+V P P+ I A P LP + S +ER+L+LPSWERLG LL+D + ++ A A E + S G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QR R RRP+V +AME SDGS XXXXXXXXX G+ ERRTS R QKQ E +REA+VAAARE++++FR+ASLF P E + D D D+ A GE + EH +WWP LA + + E GG G+ G+ +E+ ALA ++LPRWK+RH DC RCG G+++CCDFCHLV+HP+CLEVTP L+SLFAC DCKE EAA L WEL+ R+ AS G GL+ LLRAADGR GNAGVVDLM RWL+ V +AP +LC + D P + +LA VAL +EPIVRGYLP R +WP ++V + PG G ELGL CELALAEM +DKAL+ P G GS S A +L AP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + RS E + + + L+ AD ++++LEP+ + ++ D+GDG + G+ + PW + VRWWWL+G+RAR G E AL+ F RCE AL +GRG E + AV+LPYC V+PRID QVVRG++ D+ELSGTSEAAR F AI +LS A + XXXXXXXXXXXXXXXXXXXXXXXXXX G+ A P + SA + L P G NG R++ +++ T+ +G A P D A ALA ++RGLESRFV + + G +A P A D V A KS G R W+ R+ R EELL+DLLE+EKAFL+++NR+GA AL+ A+ + S + + P A + L+ G + + PP AA S G + ++ H PL +SGPG G SVFSMMLR A ++GR+E AVLLAVRCAEH LD + L+SP+GPL + R ++ LG V LLLTS+ GA RR VDAA TSA +EFLA++L+V +WA P RAELFG R SVLRCLAR++++SM+ DN VL+L V AW AI AV P P P V EVE + A KS + E ++ F + LVRCLCG+V GRWKQ A A K KAW LHA+EA+H L ++ +S+S + + + D + S G + + G S+ + R FF N EL++++ +LMGLS L G
Sbjct: 1 MKMARLSRAAGLSNLARLALERLLEVNGDHVLALRTLKDVLSEIGDVAACREVTTRLLNLDPYGDSGLSCAAAVEHPSPVPIHAPPATTANTRGEQHQQAGYPLPRRRWASPSRSSPPHCVERTLDLPSWERLGRLLIDTRACIVRGQRPAPRAAPARTAAGAGELVPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNQR--RLRRPSVEKAMEWYSDGSXXXXXXXXXXXXXGGKGKGKGKLNGGRQSELRAERRTSARRQKQVE-IREADVAAAREDDVEFRVASLFLPAEEASNDDNGDGGLDAA--ATVGEEGEQQEPEH-AWWPKLARGAGRGARVDESAAAEEGGACGDAGELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKE----EAAILEWELKGRDDAASGAVAG--GLQELLRAADGREGNAGVVDLMFRWLKGVTKAPTDDLCLEAAYCAADNRARGGGRGGGNAGVPQTTAGVPSGGYQLAAVALAVEPIVRGYLPTRFTWPALLAVGPPQATVDVAAPGEDDGP-ELGLACELALAEMRVDKALSLMRQRQLQQRPAG-------------GSKSNAHSLAGVQPSAPVGGANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLRRSPEDLAREASEI---LADADRAILQLEPWCLAIDNSNLGDDGDGAAKHGE-----SNTAPWVLAVRWWWLKGIRARQGGQAEEALEHFHRCESAL------RGRGREQQAQXXXXXXXXXXXXXXXXXXXXXXXXVAVLLPYCSVHPRIDLQVVRGLVTDVELSGTSEAAREAFSSAILLLSKCPAVRNADTAAGQRATVTAGTGTGATAEAARPGAASQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAAVANESRVGDPPDSQSVVSAESNPAGSVRLAPGGGQ----GNG----ERSLPSAAVDGTARLGGTGDGVKASSPPQQQRDQALKALACVMRGLESRFVARTSSASPPFQGLISPPQSAXXXXXXXGPGAPD-----VTAEPKSXXXAGNRGGWTARVLSSRAEELLSDLLEKEKAFLAQVNRDGARALERLAADLDKPNAAXXXXXXXXXXXXXXXFLARTSPAPATPAIAVPSVLASAGGRSDLAAPRLTTAGPSSPPGTSTAAAVSGGERELLFQRRRR-------HVPLRLSGPGLGDQNSVFSMMLRGASLLGRHEIAVLLAVRCAEHFLDASDVLASPKGPLGIGGGGSGRRGSPAMRRAGAAGRSGSEGLGAVHLLLTSRRP--GADRRAVDAAVTSATAEFLAHALAVVVWAVPCAARAELFGDGXXXXXXXXXXXXXXXXXXXXXXRASVLRCLARLMRHSMEDDNTRVLNLCVIAWQAIAAVAPVPNNASTRTDTETGKPLPSEGRSVIEVEAD-WAQKSH----DDEAGSVSTTEFGAFAGESVVRGLVRCLCGVVVGRWKQTAKARK------KAWVLHAMEAVHALVRTLEYHQSVSC--SNAMPATNNTNLTDSDSLIGPRLSPG-VSGVAGGDSGVITPSAPVGAKPARHSSSFFFNASELRDLVKALMGLSNLPDG 1672
BLAST of mRNA_H-paniculata_contig40.10368.1 vs. uniprot
Match: D7FMA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA4_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 6.850e-15 Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 1
Query: 10129 EKTVLERAWDLYLKLLEL--TGRQGA------LPMRSS-----LLGDAEGMLIQAWEAFGAANPAMLDMVEMQSPPRLLESMQAGRSGXXXXXXXXRGTKMQRAQACCNVLWPDRLGKGKVAKSKLRLKRPATGPSQ----SAANRAAPKPRVRP 10542
EK LE AW+LY+++++L T R G P +SS LLGDAE +L+++W+AFGAAN A+L++VE+Q+P L S G G ++RA+ACC+V WPD+ G+GK++K S+ANRAAP+P+V+P
Sbjct: 268 EKPALENAWNLYVQVVDLESTTRSGGGSSSSLRPGQSSCFGLTLLGDAEEVLVKSWQAFGAANAAVLELVELQNP---LPS-----PGKGAGPDTGGGMLLRRARACCHVFWPDKQGRGKMSKXXXXXXXXXXXXXXXXXASSANRAAPRPKVQP 414
BLAST of mRNA_H-paniculata_contig40.10368.1 vs. uniprot
Match: L8GEZ4_ACACA (Tetratricopeptide repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEZ4_ACACA) HSP 1 Score: 75.1 bits (183), Expect = 3.270e-9 Identity = 44/138 (31.88%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 19 MYRQALILHGQGGPHSDEWARAKQLYDNVLSDGYVGRASSTFKSPIRFLCLKNMADMFEREGDDVMALQGNIAAAEEDETDLVVWLKMARIARRGGVLNLARLALERLLANREDHVLALRTLKDILLEIGDDAAFRQV 432
+Y++AL L G + + + L L+ G +++ +R+LCLKN+AD+ + +G+ AL+ + A + + TD+ VW + +ARR LAR A ER L+ H L+L L +++ EIGD A R++
Sbjct: 30 LYKEALALQSAGDVRASKLHYKQLLRSPFLATTSHGSSANVAALKLRYLCLKNLADVNDAQGNANAALKYYVQALDVESTDVAVWYHVGSLARRTHHTALARHAFERALSCNPKHWLSLEALLEVVFEIGDQAGCRRI 167 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40.10368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40.10368.1 >prot_H-paniculata_contig40.10368.1 ID=prot_H-paniculata_contig40.10368.1|Name=mRNA_H-paniculata_contig40.10368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=3545bp MYRQALILHGQGGPHSDEWARAKQLYDNVLSDGYVGRASSTFKSPIRFLCback to top mRNA from alignment at H-paniculata_contig40:26713..52910- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40.10368.1 ID=mRNA_H-paniculata_contig40.10368.1|Name=mRNA_H-paniculata_contig40.10368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=26198bp|location=Sequence derived from alignment at H-paniculata_contig40:26713..52910- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40:26713..52910- >mRNA_H-paniculata_contig40.10368.1 ID=mRNA_H-paniculata_contig40.10368.1|Name=mRNA_H-paniculata_contig40.10368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=21270bp|location=Sequence derived from alignment at H-paniculata_contig40:26713..52910- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |