mRNA_H-paniculata_contig40.10366.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: D7FZN1_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN1_ECTSI) HSP 1 Score: 917 bits (2370), Expect = 0.000e+0 Identity = 489/735 (66.53%), Postives = 569/735 (77.41%), Query Frame = 1
Query: 388 VLTMKDAREALRSLFGHSDFRDGQ--------------------------EHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNS-----LADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGD--RVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAK-AVTVDT 2490
+L M+DAREALRSLFGH DFRDGQ E V++L+AGESCA +FPTGAGKSICYQ+PG LMA++GLGLTLVVSPLIALMKDQTDAL AGVPCAKLDSTLEA EV +IYEQIRAG+++LLYVSPERFNNERF+ LKG+KVALFVVDEAHCISEWGHNFRPDYLRLA FA+AA A ARLALTATATPKV++DIA+RLDIP SNV RTPFYRPML+L AVRAPD+ ER + LA LL G+ G GA +VYVTLQKTA EVA AL G+DARPYHAGLP ++REETQ+WFMNA D SPVVVGTIAFGMGLDKKNVRRVFHFNLP+SPEDLAQQVGRAGRDGE ASC TLVSAADLP+L+S +YGGTPS AAV GLLR +FA+ ED+ DFNFYD+SQ LDT+DLVLKTL+AHLQI GLVRE+TP++ TADV L D G+ L E D+P++W+ L MA L +KR+ +KWATL VD+ A+ LGVPI QIAR LSGM GLI GKPGK+R+RFQ+LRRPA+ E+ +L+R L+ A++L+ REL R+D V+EILCS EG VSSGLS YFGDS T+SEA+A E + ++ + L+D+L PP+V E EID W+ G+LDLL E GD RVIP DD YLLAR+AAGIRSPRIGKL+LAQLGSFGCCA+ PF ALL RA+ AV + T
Sbjct: 39 LLGMEDAREALRSLFGHDDFRDGQAKDQHSRRWYALVYKPGLSFQTSTKEEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVRTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNRTPFYRPMLTLGAVRAPDDQEERARLLADILLRGEHHQQGRGTAAGSGAAVVYVTLQKTAVEVAQALAAAGIDARPYHAGLPPLQREETQDWFMNAPDDESPVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGERASCTTLVSAADLPVLRSMIYGGTPSEAAVRGLLRAIFASGEDEADFNFYDLSQMLDTKDLVLKTLVAHLQIRGLVRELTPYFETADVQLLDAGMAILDDGTEEAIGDMPREWVAALGMADTKLKQKRANAKWATLRVDETAEALGVPIQQIARMLSGMTYEGLIALGKPGKVRARFQVLRRPASREQAQALSRDLHAMAMDLQDRELGRLDTVMEILCSQEGTAVSSGLSEYFGDSEATISEAVANERAAAAVAVAERGAPLLSDVLTPPQVSEEEIDERWRAGVLDLL-----LEPGGGDDNRVIPCDDAYLLARFAAGIRSPRIGKLKLAQLGSFGCCANHPFPALLARAEEAVAIAT 768
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A6H5JUW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW0_9PHAE) HSP 1 Score: 820 bits (2118), Expect = 1.400e-283 Identity = 451/746 (60.46%), Postives = 531/746 (71.18%), Query Frame = 1
Query: 499 AAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQT-------------------------------------------DALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISE---------------------------------WGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNS-----LADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAK-AVTVDT 2490
A FPTGAGKSICYQ+PG LMA++GLGLTLVVSPLIALMKDQ D L AGVPCAKLDSTLEA EV +IYEQIRAG+++LLYVSPERFNNERF+ L+GVKVALFVVDEAHCISE WGHNFRPDYLRLA FA+AA A ARLALTA ATP+V++DIA+RLDIP SNV RTPFYRPML+L AVRAPD+ ER + LA LL G+ G GA +VYVTLQKTA EVA AL G+DARPYHAGLP ++REETQ+WFMNA D SPVVVGTIAFGMGLDKKNVRRVFHFNLP+SPEDLAQQVGRAGRDGE ASC TLVSAADLP+++S +YGGTPS AAV GLLR VFA+ +D+ D NFYD+SQ LDT+DLVLKTL+AHLQI GLVRE+TP++ TADV L D G+ L E D+P++W+ +L MA L +KR+ +KWATL VD+ A LGVP+ QIAR LSGM+ GLI GKPGK+R+RFQ+LRRPA+ E+ +L+R L+ A++L+ REL R+D V+EILCS EG VSSGLS+YFGDS T+SEA+A E + ++ + L+D+L PP++ E EID W+ G+LDLL E RVIP DD YLLAR+AAGIRSPRIGKL+LAQLGSFGCCA+ PF ALL RA+ AV + T
Sbjct: 36 ACFFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQVWYMLLNHNLFSLLSARQDIALCRGQLTVLVLLWMGLGTIAGVKDKLGPAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVRTLQGVKVALFVVDEAHCISEGRVCCGAQRQMPLPVEAKRTSTEPVLHLLVSPQWGHNFRPDYLRLADFAKAARANARLALTAAATPQVAVDIANRLDIPPSNVNRTPFYRPMLTLGAVRAPDDQEERARLLADILLRGEHQQQGSGTAAGSGAAVVYVTLQKTAVEVAQALAAAGIDARPYHAGLPPLQREETQDWFMNAPDDESPVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGERASCTTLVSAADLPVIRSMIYGGTPSEAAVRGLLRAVFASGDDEADLNFYDLSQMLDTKDLVLKTLVAHLQIRGLVRELTPYFETADVQLLDAGMAILDDGTEEATGDMPREWVAVLGMADAKLKQKRANAKWATLRVDETAGALGVPMQQIARMLSGMSYEGLIALGKPGKVRARFQVLRRPASREQAQALSRDLHAMAMDLQDRELGRLDTVMEILCSQEGTAVSSGLSKYFGDSEATISEAVANERAAAAVTIAERGAPLLSDVLTPPQISEEEIDKRWRAGVLDLLLEPGGGNDH---RVIPCDDAYLLARFAAGIRSPRIGKLKLAQLGSFGCCANDPFLALLARAEEAVAIAT 778
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A835Z8G9_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G9_9STRA) HSP 1 Score: 526 bits (1356), Expect = 9.690e-169 Identity = 336/789 (42.59%), Postives = 418/789 (52.98%), Query Frame = 1
Query: 403 DAREALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGV------------------------------------KVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFM-----------NASDGA------SPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVE---------------------------------------------DQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNSLADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAKA 2475
D AL+ FG+ +FRDGQE V L+ S AAI PTGAGKS+CYQ+PG ++A+ G G T+VVSPLIALMKDQ ALA G+PCA+LDS+L+A R+ Y+ +R G LLYVSPERFNNERF A KG +VALFVVDEAHCISEWGHNFRPDYLRLAAFARAA A A LALTATATP+V+ D+ +RL I +VVRTP +R L+L A RAPD ER LA L GAT+VY LQ+TA + AA L G+ AR YHAGL R++ Q+WFM A GA + VVVGTIAFGMGLDK +VR V+H NLP+S E Q+VGRAGRDG + C LVS AD+P L++ VY TP AAV GLL T+F + +D + YD++Q LD R+ VL+TLLAHLQ+ G +RE T ++ T VGL+ G + L +E A LG KR GSKWA + V A+ LGV + +I R L +A AGL+ G KIRSRF +L P + E+ +LA L+ ALELE REL RID V+ +LCS+ G + +GLS +F D +A A RV P DD LLAR+A G+R+PR+ +L+LA FG CA C F + RA+A
Sbjct: 50 DVHAALKYYFGYDEFRDGQEEVVRLLLQQRSAAAILPTGAGKSLCYQLPGLVLARAGRGTTVVVSPLIALMKDQAQALAARGLPCARLDSSLDAAVARDAYDMVRRGRAGLLYVSPERFNNERFASAFKGALVHFARWAQLRTVERRGAAARARISSEAGLGALSKARVALFVVDEAHCISEWGHNFRPDYLRLAAFARAAGAAATLALTATATPRVAADMCARLAIAQHDVVRTPLHRAELALRAARAPDALEERVAALAARLRARAP-----------GATIVYAMLQQTATDAAAMLTAAGIPARAYHAGLRAAERDDVQDWFMAGAGEGDVQGARARGGAGRWPDDARVVVGTIAFGMGLDKGDVRYVYHLNLPRSIEGYCQEVGRAGRDGRPSLCEALVSPADVPTLRAMVYSNTPGAAAVRGLLDTMFPSAAAGXXXXXXXXXXXXXXXXAFSXXXXXXXXXXXXXXXXXXXXXXXAPAVDVSLYDLAQRLDAREEVLRTLLAHLQMAGRLRETTSYFETQQVGLS--GGXXXXXXXXXXXXPQQRALLAAVEAA---LGAKRKGSKWADVDVKGMAEQLGVEVLEIPRMLQQLAEAGLVTLGAARKIRSRFHVLDAPRDDTEQQALADALHAQALELEQRELGRIDAVLSLLCSSGGAAIGAGLSAHFVDPP----DARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARV-PLDDALLLARFAVGVRTPRVARLKLAAAPGFGACAECAFDDIYARARA 817
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: UPI000AB9CF76 (RecQ family ATP-dependent DNA helicase n=3 Tax=Candidatus Thiosymbion oneisti TaxID=589554 RepID=UPI000AB9CF76) HSP 1 Score: 446 bits (1148), Expect = 2.050e-140 Identity = 297/696 (42.67%), Postives = 402/696 (57.76%), Query Frame = 1
Query: 403 DAREALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNSLADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQ--LGSF---GCCAHCPFSALLERAKA 2475
D + AL+ FG FR GQE V+ L+AG S AA+FPTG GKS+CYQ+P L+ GLTLVVSPLIALMKDQ DAL G+ A+LDSTL+A R + EQ+R GT+ LLYV+PERFNNERF A+ V+++LF VDEAHCISEWGHNFRPDYL+LA FARA A LALTATAT +V DI L I VRT FYRP LSL+ P + ER +L L G T+VYVTLQ+TAEE+A LV G +AR YHAG+ +V R E Q+WFM ASD A +VV TIAFGMG+DK N+R V+H+NLPKS E+ +Q++GRAGRDGE A C LV DL +L++FVYG TP P AV GL+R +FA + + + Y+++ E D R LVL+TLL +L++ G + TP Y L TS E L + D+ + R W + AA VLG +I R L + ++ R + + R++ L+ PA+ A+LA L++ L+ EA EL+R+ +V+E+ ++ G ++ L+ +FG+ + + S + E+PE + + GL D + +T +G + D+P LAR+ G+ SPR+ +++L + LG G PF +LE A A
Sbjct: 4 DVQAALKRHFGFETFRPGQEAVVAHLMAGHSAAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALTRRGIAAARLDSTLDAAAHRTVMEQVRKGTLRLLYVAPERFNNERFREAITPVRISLFAVDEAHCISEWGHNFRPDYLKLAGFARACGAERVLALTATATERVLADICDGLAIDAERAVRTGFYRPNLSLTMT--PVSAAERDGSLLTALRANPP-----------GPTIVYVTLQRTAEELAERLVAAGCEARAYHAGMQDVLRAEIQDWFM-ASDQA--IVVATIAFGMGIDKANIRYVYHYNLPKSLENYSQEIGRAGRDGEPAICHLLVCPDDLNVLENFVYGDTPHPHAVRGLIRDIFAR-GSEFELSLYELAFEHDIRPLVLRTLLTYLELKGFLAGGTPLYG-------QYRFQPLLTSRE----ILARFEGARRTFLADLFRQARPARSWFHIDPGAAAMVLGTDRERIIRALDWLGEHQML-RVEARGLGHRYRRLQSPADP---AALADELHQYGLKREAAELERLRQVLEL--ASRDGCQTAALAAHFGERLEQACGHCSWCRSGGT-------------ELPERDSPGI-PPGLRDQVDRLVST---AGGAL---DEPGSLARFLCGVSSPRLSRVKLGKQPLGKHPLAGTLTRVPFRTVLEWASA 641
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A450TLC6_9GAMM (ATP-dependent DNA helicase, RecQ-like (Fragment) n=2 Tax=Candidatus Kentron sp. DK TaxID=2126562 RepID=A0A450TLC6_9GAMM) HSP 1 Score: 447 bits (1150), Expect = 2.290e-140 Identity = 287/693 (41.41%), Postives = 391/693 (56.42%), Query Frame = 1
Query: 400 KDAREALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNE--GHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNSLADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAK 2472
+D R L+ FG S+ R GQE + L+ GES AA+FPTG GKS+CYQ+P L+ G+TLVVSPLIALMKDQ DAL G+ +LDS+L +E R++ Q+R GT+ LLYV+PERFNNERF +L+ V++ALF VDEAHCISEWGHNFRPDYL+LA FAR A LALTATATP V DI DI +RT FYRP L+L + N ER + L + E G +VYVTLQKTAEEVA L G+ AR YHAGL + R QEWFM A+D A +VV TIAFGMG+DK N+R V+H+NLPKS E+ +Q++GRAGRDG A C LV + DL +L++F+YG TP ++ L+ VF +D D + + +S E D R LVL+TLL +L++ G ++ TPFY+ D L +S E G + +L + + G W L ++ A L +I L +A GL+ K IR RF++L+RP G+ +LA L+ L+ E E+ R+ +V++++ + T + L+ +FG+ Q + N +S + PP D LW H E+ + V +P LLAR GI SPR+ + ++ FG A PF+ +L+RA+
Sbjct: 31 QDIRHHLQQYFGFSEPRPGQEAVIRHLLDGESAAAVFPTGGGKSLCYQLPALLLP----GVTLVVSPLIALMKDQIDALTARGIHARRLDSSLTGEEYRDVMVQLRGGTLPLLYVAPERFNNERFRESLRNVRIALFAVDEAHCISEWGHNFRPDYLKLAGFAREFGAERILALTATATPPVLDDICRLFDIKPHCAIRTGFYRPNLTLDTLAV--NAGERDEILLESIREQPK-----------GPAIVYVTLQKTAEEVAKRLAAAGLPARAYHAGLKDELRSLIQEWFM-AADHA--IVVATIAFGMGVDKANIRAVYHYNLPKSLENYSQEIGRAGRDGGPALCRMLVCSNDLNVLENFIYGDTPDAGSIRALIERVFNQGDD-FDESLHSLSAETDIRPLVLRTLLTYLELDGYLQSGTPFYS-------DYNFKPLQSSKEILGRFQGERRTFL------AGVFRQAVKGRIWFKLDLEQTARTLDANRERIIVALDWLAEQGLL-EVKAAGIRHRFRVLQRPQTGD---ALAAELHRRILKREQAEIGRLQQVLDLVSLDNCQT--NALAAHFGEERQQPCGHCSWCNRGASEI---------PPRRSTEISDDLW-----------HKVERLKDEEVGIFKNPRLLARLLCGITSPRLSRAKMTGHNLFGSLAQAPFAEVLQRAE 663
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A2M7Q472_9PROT (RecQ family ATP-dependent DNA helicase n=1 Tax=Zetaproteobacteria bacterium CG_4_10_14_0_8_um_filter_49_80 TaxID=1974111 RepID=A0A2M7Q472_9PROT) HSP 1 Score: 434 bits (1117), Expect = 4.830e-136 Identity = 287/691 (41.53%), Postives = 383/691 (55.43%), Query Frame = 1
Query: 412 EALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSL--SAVRAPDNPIERTKTL-ARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNSLADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPR-DDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAK 2472
E L+ FG F GQ + +L+AG S AIFPTG GKS+CYQ+P L+ GLTLVVSPLIALMKDQ DAL G+ A+LDS+L ADE RE++ Q R+G + +LYV+PERFNNERF + G+ +AL +DEAHCISEWGHNFRPDYL+L +A++ A LALTATAT V DI I +RT FYRP L+L SAV A ER TL AR G + +VYVTLQ+TAEEVAA L G ARPYHAG+ N R ETQEWFM A D +VV TIAFGMG+DK N+R V+H+NL KS E+ AQ++GRAGRDGE + C LV DL +L++F+YG TP+ AA+ LL +F+ ED D + Y++S + D R LVL+TLL +L++ G + TPFYA LA +E L L +A + W T+ V AA L +I R L +A L+ K IR+R++ L+RP + A+LA L++ A + EA E+ R+ +V++ +GL+ +F D ++ + L+ + LA E + D +W + LR R P+ DP L R+ GI SP++ + +LA FG PF +L +
Sbjct: 8 ETLQRYFGFRAFNPGQRAVIEQLLAGHSALAIFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALQQRGIAAARLDSSLSADEYREVFNQARSGALKMLYVAPERFNNERFRATIAGLPIALLAIDEAHCISEWGHNFRPDYLKLPEYAQSFAAERVLALTATATRAVEDDICRAFSIQSDCAIRTGFYRPNLTLLSSAVSAG----ERDATLLARIRSRASGPV------------IVYVTLQRTAEEVAARLAEAGFSARPYHAGMKNELRAETQEWFMQADDA---IVVATIAFGMGVDKSNIRYVYHYNLAKSLENYAQEIGRAGRDGEPSICEMLVCMDDLNVLENFIYGDTPTQAALQSLLDDLFSQEED-FDISQYELSNQHDIRPLVLRTLLTYLELDGYLAGGTPFYANYQFKPLQSSAEILARFDEERRTFLGN----LFRLA-------QKARTWFTIDVQQAAVQLSTQRERIIRALDYLAEQNLL-EVKVSGIRNRYRRLKRPDSN---AALAEALFQRACKREAAEIARLQQVLDFASMQRCQV--NGLAAHFDDQR-------SEPCGHCTWCLHQQSATLAERHSREIDSD-IWNQAI--ALR-----------RETPQLHDPVALVRFLCGISSPKLSQSKLAYHPLFGSMVDVPFKMVLSHVR 636
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A2D5ZN95_9BACT (RecQ family ATP-dependent DNA helicase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D5ZN95_9BACT) HSP 1 Score: 434 bits (1115), Expect = 1.280e-135 Identity = 281/693 (40.55%), Postives = 388/693 (55.99%), Query Frame = 1
Query: 391 LTMKDAREALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATA--DVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNSLADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLE 2463
LT A LR FG FR+GQ +SRL+AG S AAIFPTG GKS+ YQ L A G+TLVVSPLIALMKDQ D+L G+P ++DS+L +E R +++RAG + LLYV+PERFNNERF ++++LF VDEAHCISEWGHNFRPDYL+LA AR A LA+TATATP+V I I VR PFYRP L+L + P P ER L L E GA +VYVTLQ+TAE VA L G A YHAG+ R QE F+ ++DG +VV TIAFGMG+DK N+R V+H+NLPKS E+LAQ++GRAGRDGE ++C L A DL +L++F +G TP+ A+ GL+ +F+ D ++ + +SQ D R LV++T+L +L++ G + TPFYA+ + ++ I A + + V + + G +W + V+ AA LG P ++I R L ++ G++ R + ++R R++ LR P + + +LA L+ LE E RE +R+++VV ++ G S L +FG EA+ + S+ L+ L P P E + LW + L RE+ DDP ++AR +G+ SP + K RL + FG AH PF L E
Sbjct: 11 LTKTRALTTLRDRFGFEQFREGQWEVISRLLAGRSAAAIFPTGGGKSLLYQ----LTALELEGITLVVSPLIALMKDQIDSLVALGIPARRIDSSLGEEEYRAAMDELRAGRLKLLYVAPERFNNERFRELAATLRISLFAVDEAHCISEWGHNFRPDYLKLARSARELRAERVLAITATATPRVLESIREGFSIDADCAVRIPFYRPNLTL--ITTPVTPAERDGLLLARLRERPR-----------GAAIVYVTLQRTAEVVATLLAGAGFPAWAYHAGMTAEDRNAVQERFLASTDG---IVVATIAFGMGVDKPNIRYVYHYNLPKSLENLAQEIGRAGRDGEPSTCEILACADDLTVLQNFAFGDTPTRGAIRGLVAELFSE-GDSLELSLGVLSQRYDIRTLVVRTILTYLELSGHLEGGTPFYASYRFEPRMSSREILARFRGERRN-------------LLVSVFRQATKGRRWFHIDVEAAAHDLGQPRSRIVRALDHLSEVGML-RVEAAQVRFRYRKLRDPDDAQ---ALADELHARLLEHEGRETERLEQVVALV--ELSGCQVSALGAHFG-------EALDRSCGHCSSCLDGQPRRLGEPARPSIE-ETLWDD-VRKLRRENEGLF----------DDPRVVARLLSGVSSPALAKARLTRHRLFGAMAHVPFRELEE 644
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A850G6E5_9DELT (ATP-dependent DNA helicase RecQ n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850G6E5_9DELT) HSP 1 Score: 434 bits (1115), Expect = 1.410e-135 Identity = 290/699 (41.49%), Postives = 382/699 (54.65%), Query Frame = 1
Query: 415 ALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLI-IRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNS-LADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAKAVTVDTEPDMS 2505
ALR FG F GQ + L+AG S AA+F TGAGKS+CYQ+P L+ GLTLVVSPLIALM DQ AL G+ KLDSTL +E + +Q+R+G LLYV+PERFNNER +L G++V+LF VDEAHCISEWGHNFRPDYL+LA FA+ A A LALTATATP V DI LDI VRTPF+RP L L P + ER L L E G +VYVTLQ+TAE VA L GV ARPYHAG+ R TQ WF +SDG VVV TIAFGMG+DK ++R V+H+NLPKS E+ +Q++GRAGRDG ++C L DL L++FVYG TP+ AA+ GLL +FA ED D S E D R+LVL+TLL +L++ G + TPFYA + LA + H + +L + + G W L D A LGVP ++ R L +A ++ +R + ++R R++++R P +E LA LY + E E+ R+ +V+ ++ G +SGL +FG+ + + S+++ L S D + +AE Q +L P LAR GIRSP + + +L + FG A PF+A+LERA + P MS
Sbjct: 13 ALREGFGFESFNPGQREVIEHLMAGRSAAAVFATGAGKSLCYQLPATLLP----GLTLVVSPLIALMNDQITALRARGIVAHKLDSTLSFEEYKAAMDQLRSGEARLLYVAPERFNNERLRESLLGLRVSLFAVDEAHCISEWGHNFRPDYLKLAHFAKQAGAERVLALTATATPAVLDDICRVLDIDEGCAVRTPFHRPNLRLELT--PVSESERDAILRARLSERPP-----------GPAIVYVTLQRTAELVAEQLARHGVPARPYHAGMDPDLRAATQAWFGRSSDG---VVVATIAFGMGIDKPDIRYVYHYNLPKSLENYSQEIGRAGRDGAPSTCELLACVDDLVTLENFVYGDTPTRAAIGGLLEHLFALGED-FDIALRSTSSEFDVRELVLRTLLTYLELRGYLVGGTPFYAAYEFKPLMPSAQLLAQI-DAHERGFVRA----------VLTKTKKGRVWFHLDADATAKALGVPRGRVVRVLDDLAEREMLELRAR--QLRHRYRVVRAPTELDE---LADQLYAQMAKREHEEIGRLHEVLALV--GRDGCQASGLGEHFGEPLEAACGRCSWCTSKTATPLPSDYGDTIDAAVWAQAEALRAEQPEVLGA--------------------PRSLARMLCGIRSPALTRAKLHKHALFGAQARVPFAAVLERANPMRT---PSMS 649
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A833IRD6_9GAMM (RecQ family ATP-dependent DNA helicase n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833IRD6_9GAMM) HSP 1 Score: 431 bits (1108), Expect = 1.110e-134 Identity = 281/696 (40.37%), Postives = 385/696 (55.32%), Query Frame = 1
Query: 409 REALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNSLADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAKAVTVDTEP 2496
R+AL+ FG FR GQ V L+AG+S AA+FPTG GKS+CYQ+P L+ G+TLVVSPLIALMKDQ DALA G+ +LDS+L A+E R + +++RAGT+ +LYV+PERFNNERF A+ ++ALF VDEAHCISEWGHNFRPDYL+LA +AR A LALTATATP+V DI DI VRT FYRP L L + D R L L + G +VYVT QKTAE +A L +G AR YHAGL +R E QEWFM G +VV TIAFGMG+DK ++R V+H+N PKS E+ AQ++GRAGRDG+ + C L+ A D +L++FVYG TP A + LL +F E + D +++S++ D R LVL+TLL +L++ G +R TP Y+ +G T + EG + +L+ + + R G W +L AA LG P ++ + L + G++ G +R + LR P E +LA LY+ L E E+ R+ +V+ + + G S+ L+ +FG E + + + S LA + PE +A I + +LL E H PR L+R+ G+ SPR+ + RL FG A PF+ +L+ A+ T P
Sbjct: 6 RDALQQYFGFDQFRPGQAPVVDHLLAGQSAAAVFPTGGGKSLCYQLPALLLP----GVTLVVSPLIALMKDQIDALAARGIAARRLDSSLSAEEYRAVMDEVRAGTLRILYVAPERFNNERFRAAIARTRIALFAVDEAHCISEWGHNFRPDYLKLAGYARELQAERVLALTATATPQVLEDICRLFDIRPECAVRTGFYRPNLQLLSTVVSDE--NRDLMLLDALAQRPP-----------GPGIVYVTQQKTAETLAERLAQQGYAARAYHAGLKPEQRAEVQEWFMG---GEQALVVATIAFGMGIDKADIRYVYHYNPPKSLENYAQEIGRAGRDGKPSICHLLLCADDFNLLENFVYGDTPEQADLESLLADLFGRGE-RFDVALHELSRDHDIRPLVLRTLLTYLELEGYLRGGTPVYSDYKFKPL-QGSTEILQRFEGER----RHFLE------GLFRQARKGRIWLSLDPAQAARALGCPRGRVVQALDWLGEQGMLEVQAAG-VRHAYSRLRSP---ESLPALAAALYQRLLARETAEIGRLQQVLAL--AGAGECRSAALAAHFG-------EQLEQPCGQCSGCRGELASI---PERHQASIPPALVGRVQELLAEGHPA------LAAPRG----LSRFLCGVSSPRLSRARLGSHPLFGAAAELPFAQVLQWAERALAPTAP 643
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Match: A0A369BQI3_9GAMM (RecQ-like ATP-dependent DNA helicase n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369BQI3_9GAMM) HSP 1 Score: 430 bits (1105), Expect = 2.620e-134 Identity = 288/689 (41.80%), Postives = 379/689 (55.01%), Query Frame = 1
Query: 409 REALRSLFGHSDFRDGQEHAVSRLIAGESCAAIFPTGAGKSICYQVPGALMAKRGLGLTLVVSPLIALMKDQTDALAVAGVPCAKLDSTLEADEVREIYEQIRAGTISLLYVSPERFNNERFMGALKGVKVALFVVDEAHCISEWGHNFRPDYLRLAAFARAANAGARLALTATATPKVSMDIASRLDIPLSNVVRTPFYRPMLSLSAVRAPDNPIERTKTLARCLLEGDGVIGGETGLDWGGATMVYVTLQKTAEEVAAALVMEGVDARPYHAGLPNVRREETQEWFMNASDGASPVVVGTIAFGMGLDKKNVRRVFHFNLPKSPEDLAQQVGRAGRDGEAASCLTLVSAADLPILKSFVYGGTPSPAAVLGLLRTVFATVEDQIDFNFYDISQELDTRDLVLKTLLAHLQIMGLVREMTPFYATADVGLTDEGITALATSNEGHHVDLPKDWLQLLEMAVDILGRKRSGSKWATLHVDDAADVLGVPITQIARTLSGMANAGLIIRGKPGKIRSRFQILRRPANGEEEASLARHLYETALELEARELDRIDKVVEILCSNEGGTVSSGLSRYFGDSAQTVSEAMAKENSRSSNVLNSLADLLAPPEVPEAEIDYLWQTGLLDLLREHHATEKESGDRVIPRDDPYLLARYAAGIRSPRIGKLRLAQLGSFGCCAHCPFSALLERAKA 2475
R AL FGH++ R GQ + L+AG S AA+FPTG GKS+CYQ+P L+ GLTLVVSPLIALMKDQ DALA G+ +LDSTL A+ RE+ E++R G++ LLYV+PERFNNERF A+ V+V+LF VDEAHCISEWGHNFRPDYL+LA FAR A LALTATATP+V DI + I VRT FYRP L L P+ + DG + G G T+VYVTLQ+TAE +A L G+ AR YHAGL R QEWFM + DG +VV TIAFGMG+DK ++R V+H+N PKS E+ AQ++GRAGRDGE A C L+ A DL +L++FVYG TP AV GLL +FA E D + Y+ S D R LVL+TLL +L++ G + TPFYA D L S E L + + + + R G W +L AA LG ++ R L + ++ K +R+R++ LR P E+ SLA L++ L EA E+DR+ +V+ + G S+ L+ +FG++ V R + + PP P + L+ L E A P LAR+ G+ +P++ + RL FG PFS +L A+A
Sbjct: 6 RSALGEHFGHAELRPGQAPVMEHLLAGRSAAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALAARGIAARRLDSTLGAEGHREVMERVRDGSLRLLYVAPERFNNERFRAAIARVRVSLFAVDEAHCISEWGHNFRPDYLKLAEFAREFGAERILALTATATPRVLEDICAAFRIAPGCAVRTGFYRPNLHLLTT-----PVAADRR--------DGKLLGLLRERPRGPTIVYVTLQRTAETLAGRLAGAGLPARAYHAGLKEEERTRVQEWFMASGDG---IVVATIAFGMGVDKADIRYVYHYNPPKSLENYAQEIGRAGRDGEPAICHLLLCADDLNVLENFVYGDTPDVGAVRGLLGALFAAGE-AFDLSLYEFSARHDIRPLVLRTLLTYLELEGWLEAGTPFYA-------DYRFQPLFGSGE----ILDRFEGERRIFLEGLFRQARKGRTWFSLDPAAAAAALGCDRERVIRALDWLGEQRML-EVKAAGVRNRYRRLRAP---EDTDSLADQLHQRMLRREAAEIDRLGQVLALAAGE--GCRSAALAAHFGETL--VEPCGHCSGCRGEGAVT--VERRNPPIPPGLGTE-------LEPLLESEAL----------LGTPRALARFLCGVTTPKLSRARLGSHRLFGRLERMPFSEVLAWAEA 635 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40.10366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40.10366.1 >prot_H-paniculata_contig40.10366.1 ID=prot_H-paniculata_contig40.10366.1|Name=mRNA_H-paniculata_contig40.10366.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=832bp MVLLNGLRVMATAMVPLLNRVERLNAFTVSTRRLSRPPSFSTYHRTSGRSback to top mRNA from alignment at H-paniculata_contig40:2206..16745- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40.10366.1 ID=mRNA_H-paniculata_contig40.10366.1|Name=mRNA_H-paniculata_contig40.10366.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14540bp|location=Sequence derived from alignment at H-paniculata_contig40:2206..16745- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40:2206..16745- >mRNA_H-paniculata_contig40.10366.1 ID=mRNA_H-paniculata_contig40.10366.1|Name=mRNA_H-paniculata_contig40.10366.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4992bp|location=Sequence derived from alignment at H-paniculata_contig40:2206..16745- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |