prot_H-paniculata_contig4.10365.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4.10365.1
Unique Nameprot_H-paniculata_contig4.10365.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
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BLAST of mRNA_H-paniculata_contig4.10365.1 vs. uniprot
Match: A0A6H5J9G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9G9_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 8.810e-28
Identity = 75/182 (41.21%), Postives = 100/182 (54.95%), Query Frame = 0 
Query:   54 DIRKVVVFNVGKHVNDRDFYRFLSSNKISYKHAKKSPKVHHAIMSFETVGERTQAMAVLSTLQAPRGGANRPLLKAVLSTGKGD--------RGRRMGDEEXXXXXXXXXXXXXXXXXXXXQDESRTVAQATASLYGVKTYEEQLAFKEEELKRELFLALPRLVRKDWEKRVGLWRRELKVK 227
            ++ KV VFNVGKH     F + L +N + YK AKK+P + H  ++FET  +R  AM  L  +   RGG    L+ AVL+  K +        R  R GD++                    + E +TVAQATASLYGVKTY EQLAFKE+ L  +LFL LP ++R +W+KR   W+R   VK
Sbjct:   67 ELTKVTVFNVGKHATLAQFEKILKNNGVEYKRAKKTPSITHGTLTFETAAQRAVAMEQLGKIVGARGGE---LMFAVLARQKQNXXXXXXXXRNAREGDDDGRGGNASKRSRQ--------EVERKTVAQATASLYGVKTYPEQLAFKEKTLMDDLFLKLPLVIRNEWDKRFREWKRNQGVK 237
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BLAST of mRNA_H-paniculata_contig4.10365.1 vs. uniprot
Match: D7FLK1_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK1_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 4.960e-27
Identity = 70/169 (41.42%), Postives = 95/169 (56.21%), Query Frame = 0 
Query:   54 DIRKVVVFNVGKHVNDRDFYRFLSSNKISYKHAKKSPKVHHAIMSFETVGERTQAMAVLSTLQAPRGGANRPLLKAVLSTGKGDRGRRMGDEEXXXXXXXXXXXXXXXXXXXXQDESRTVAQATASLYGVKTYEEQLAFKEEELKRELFLALPRLVRKDWEKRVGLWRR 222
            ++ KV VFNVGKH     F + L +N + YK AKK+P + H  ++FET  +R  AM  L  +   RGG    L+ AVL+  K +     G++                     + E +TVAQATASLYGVKTY EQLAFKE+ L  +LFL LP ++R +W+KR   W+R
Sbjct:   72 ELTKVTVFNVGKHATLAQFEKILKNNSVQYKRAKKTPSITHGTLTFETAEQRAVAMEQLRKIVGARGGE---LMFAVLARQKQNNDIGRGNKRSARDGDDDGRGGDASKRPRQEAERKTVAQATASLYGVKTYPEQLAFKEKTLMDDLFLKLPIVIRNEWDKRFREWKR 237
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4.10365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J9G9_9PHAE8.810e-2841.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLK1_ECTSI4.960e-2741.42Methyltransf_25 domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45904FAMILY NOT NAMEDcoord: 46..217
NoneNo IPR availablePANTHERPTHR45904:SF2TRNA (URACIL-5-)-METHYLTRANSFERASE HOMOLOG Acoord: 46..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4contigH-paniculata_contig4:87073..111320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4.10365.1mRNA_H-paniculata_contig4.10365.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4 87016..111320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4.10365.1 ID=prot_H-paniculata_contig4.10365.1|Name=mRNA_H-paniculata_contig4.10365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MEENGARVDYSSVGETGASIPAPAEAESTLGEGSSVGVDLQESEAEQILG
ATGDIRKVVVFNVGKHVNDRDFYRFLSSNKISYKHAKKSPKVHHAIMSFE
TVGERTQAMAVLSTLQAPRGGANRPLLKAVLSTGKGDRGRRMGDEEEEGE
GAGSKRKRQEGDGSNNQDESRTVAQATASLYGVKTYEEQLAFKEEELKRE
LFLALPRLVRKDWEKRVGLWRRELKVKRAAEKTVEK
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