prot_H-paniculata_contig4.10359.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4.10359.1
Unique Nameprot_H-paniculata_contig4.10359.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length382
Homology
BLAST of mRNA_H-paniculata_contig4.10359.1 vs. uniprot
Match: D8LRM5_ECTSI (DUF3598 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRM5_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 1.350e-98
Identity = 165/345 (47.83%), Postives = 226/345 (65.51%), Query Frame = 0
Query:   41 MSFCVPFAPGPVQPARQREWESFVASNAGVWRGIWTTYDDTGAQQGEPDRMDTNLGLSSDGERIKHVNTLFVGSVDSDCSTCFDSVETKNIQVGEYTKETFRQRAYGSGYINGPGVTPRGDMSTEVGFR-HGNSRVRCIVVHRLPAEQLAGIEPPSHLALERIVVVKESIASGELAGETPSVDLLWSHLDEPAWLGLWRGSAGILENDSSSSGSSGSGPVRRGVVWRQENVSPTHLRACRCSGAGESDD--HVSLEVGGRIRLKAPKIIRAGEPADITIGWAPPPRSESNT-QRILQGKVQVEALSRVVDTEYVSEGSQRIKISPPQLFRFVVEDLERVASAGLR 381
            ++F +P +P        R+W  + A + G WRG+WTTYD  G ++G+PDRMDT + LS+DG+ + HVNTLFVGSV SDCSTC DSVET++I  G+YT ETFR RA    Y+ GPGVT  GDM+TE+GFR   + RVR +V HR    Q  G+EPP  LAL+RIVVV+E++A+       PS    WS  D P+WLGLWRG   +L+         G G    G+ W+++ + PTHLR CRCSGA   DD  H S E+ G I L+APKI+ AG+PA++++  A   +S++ T  RI+Q KV++EALSRVV+T   + G + ++++PP+L +  V  L  V SAGL+
Sbjct:   20 LAFSLPLSPSG------RDWNDYTAQHVGKWRGLWTTYDSAGVERGDPDRMDTTISLSADGKTVAHVNTLFVGSVGSDCSTCHDSVETRDIPAGQYTTETFRHRASSGCYLFGPGVTRGGDMTTELGFRLDEDRRVRVLVSHR---PQANGVEPPLQLALQRIVVVRETLAAQRQT--PPSASSCWS-FDRPSWLGLWRGHEMVLDG--------GGGDADDGLSWKEKALPPTHLRRCRCSGAAIEDDDSHASFELDGGILLEAPKIVDAGKPAELSVRCAIGRKSKAATPNRIVQAKVRLEALSRVVETVRSAAG-ENVRVAPPKLLQLSVHSLTPVESAGLK 343          
BLAST of mRNA_H-paniculata_contig4.10359.1 vs. uniprot
Match: A0A7S2B064_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B064_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.890e-16
Identity = 94/368 (25.54%), Postives = 156/368 (42.39%), Query Frame = 0
Query:   37 PQLSMSFCVPFAPGPVQPARQREWESFVASNAGVWRGIWTTYDDTGAQQGEPDRM-DTNLGLSSDGERIKHVNTLFVGSVDSDCSTCFDSVETKNIQVGEY-TKETFRQRAYGSGYINGPGVTPRGDMSTEVGFRHGNSRVRCIVVHRLPA---EQLAGIEPPSHLALERIVVVKESI--------------ASGELAGETPSVDLLWSHLDEPAWLGL----WRGSAGILENDS-SSSGSSGSGPVRRGVVWRQENVSPTHLRACRCSGAGESDDHVSLEVGGRIRLKAPKII------RAGEPADITIGWAPPPRSESNTQRILQGKVQVEALSRVVDTEYVSEGSQRIKISPPQLFRFVVEDLER 374
            P   +S CV   P     A + +W+ F  ++ G W G+W T++  G   G  + + D +L    D         +   SV SDC TC DS + + + +G+  T    R    G   +NGP V   G +STE+G R G+SRVR    H +PA   +  AGI PP  L L R+V+ +E++              +  + AG   +VDL W       W  L    W G+  ++ +   S + ++ +       +W +      ++R     G+G S  H+ L   G + ++ P+ I        G  A   + W       ++  R   G   +E      D + +S     +++ PP +  F  ++LER
Sbjct:   27 PLRKVSRCVTVVPVDNLDA-EGQWDLFRTNHVGRWEGVWETFNPIGDNIGTVEAIFDVSL---EDDVTATMSQAIRENSVSSDCETCHDSTQERWLPLGQVGTGALRRMTCSGPAMVNGPTVLRSGALSTELGLRFGDSRVRVTFQH-IPAWEGDSTAGIGPPDCLDLFRVVMRRETLRDAPPTRAQAEADRSEDKYAGGKGAVDL-WRGFPPFQWAQLPTEPWSGTHHVVSSQQFSDAPTTVNEDDAASWLWHE------YIRGDDGDGSGTSQWHLRLP--GGVLIQCPRRIPRQPEEEGGASAMFKLAWL---AESTSLVRASVGVCALEEEDSGGDDDMLS-----VRLKPPSIVSFSADELER 372          
BLAST of mRNA_H-paniculata_contig4.10359.1 vs. uniprot
Match: A0A7S0HW35_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HW35_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 6.840e-7
Identity = 35/71 (49.30%), Postives = 40/71 (56.34%), Query Frame = 0
Query:  108 NTL-FVG-SVDSDCSTCFDSVETKNIQVGEYTKETFRQRAYGSGYINGPGVTPRGDMSTEVGFRHGNSRVR 176
            NTL FV  SV SDC TCFDS ETK +  G ++ +T      G G   GP V   G MS E   RHG+ RVR
Sbjct:   31 NTLIFVSQSVRSDCETCFDSEETKEMPAGSFSADTLPYYICGQGSALGPRVLRSGAMSFEACVRHGDERVR 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4.10359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRM5_ECTSI1.350e-9847.83DUF3598 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2B064_9STRA2.890e-1625.54Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0HW35_9EUKA6.840e-749.30Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 55..208
e-value: 2.3E-5
score: 26.6
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 57..181
IPR022017Domain of unknown function DUF3598PFAMPF12204DUF3598coord: 59..323
e-value: 5.4E-7
score: 29.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 40..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4contigH-paniculata_contig4:2163..5965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4.10359.1mRNA_H-paniculata_contig4.10359.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4 2151..6129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4.10359.1 ID=prot_H-paniculata_contig4.10359.1|Name=mRNA_H-paniculata_contig4.10359.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=382bp
MCKARLEERRRLKVKNMPRTQVKLVRIPCLVMLLALPQLSMSFCVPFAPG
PVQPARQREWESFVASNAGVWRGIWTTYDDTGAQQGEPDRMDTNLGLSSD
GERIKHVNTLFVGSVDSDCSTCFDSVETKNIQVGEYTKETFRQRAYGSGY
INGPGVTPRGDMSTEVGFRHGNSRVRCIVVHRLPAEQLAGIEPPSHLALE
RIVVVKESIASGELAGETPSVDLLWSHLDEPAWLGLWRGSAGILENDSSS
SGSSGSGPVRRGVVWRQENVSPTHLRACRCSGAGESDDHVSLEVGGRIRL
KAPKIIRAGEPADITIGWAPPPRSESNTQRILQGKVQVEALSRVVDTEYV
SEGSQRIKISPPQLFRFVVEDLERVASAGLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR022017DUF3598