mRNA_H-paniculata_contig11601.1035.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11601.1035.1
Unique NamemRNA_H-paniculata_contig11601.1035.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: D8LLH7_ECTSI (PINc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 3.800e-112
Identity = 174/258 (67.44%), Postives = 204/258 (79.07%), Query Frame = 1 
Query:    1 KSVEDRYADGWALNASTHRWIKVAIQQKKAAIEAQPALLARLEVLECKVKLSAQKSQLLETKAEKILEEQSKRPTVVLSTPTAPELVVFDTNWLIHDLGDAKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGKDESTRYKAREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTASRPQCRPGNCPLPLCPAPPRLSPFMR 774
            ++V+DRYADGWA N +T RWIKVA Q+KK AIEA PALLARLE++E + KL+ Q+SQLLETK E+I   + K+ TV L+ PTAP LV FDTNWLIH L D  CRV DIA R   T+VLIPK V+ ELDRLKT G+DE+TR  A++ANRY   L+EKP   GREFPVVR QEDTEL+RD+G+H +P  L GDDSILNCC+FFTQGI TPRKVTL TGDNNFAIRA ++GL T  RPQC PG+C +PLCPAPPR SPF R
Sbjct:  378 QTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEI---KKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSR 632
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BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A6H5JRN9_9PHAE (PINc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 2.380e-109
Identity = 173/258 (67.05%), Postives = 204/258 (79.07%), Query Frame = 1 
Query:    1 KSVEDRYADGWALNASTHRWIKVAIQQKKAAIEAQPALLARLEVLECKVKLSAQKSQLLETKAEKILEEQSKRPTVVLSTPTAPELVVFDTNWLIHDLGDAKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGKDESTRYKAREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTASRPQCRPGNCPLPLCPAPPRLSPFMR 774
            ++V+DRYADGWA N +T RWIKVA Q+KK AIEA PALLARLE++E + KL+ Q+SQLLETK E+I   + K+ TV L+ PTAP LV FDTNWLIH L D  CRV DIA R   T+VLIPK V+ ELDRLKT G+DE+TR  A++ANRY   L+EKP   GREFPVVR Q+DTEL+RD+G+H +P  L GDDSILNCC+FFTQGI TPRKVTL TGDNNFAIRA ++GL T  RPQC PG+C +PLCPAPPR SPF R
Sbjct:  615 QTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEI---KKKKDTVSLAVPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQDDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSR 869
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BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A7S3XKL4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKL4_HETAK)

HSP 1 Score: 95.1 bits (235), Expect = 5.930e-21
Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 1 
Query:  247 APELVVFDTNWLIHDL--GDAKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGK---DESTRYKAREANRYLLSLLEKPRG--NGREFPVVRGQEDTELYRDD--GYHEKPGYLRGDDSILNCCLFFT 606
            AP L VFDTN  + D   GD +     + +      +L+P+EV+RELD LK  G    DE T ++ARE +R +  LL  PRG   GR +P++RGQ D EL+RD   G H +P  LR D ++LNCCL F+
Sbjct:    7 APVLWVFDTNVWMEDAATGDVRYAANVVLSARPDVQLLLPREVLRELDGLKKGGPGRGDERTAFQAREGSRLVEELLTDPRGLGAGRRYPLLRGQRDGELWRDPQGGIHGRPERLRADAAVLNCCLHFS 135
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BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A7S2XI71_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XI71_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 1.420e-17
Identity = 63/155 (40.65%), Postives = 80/155 (51.61%), Query Frame = 1 
Query:  256 LVVFDTNWLIHD------LGDAKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGKDESTRYKAREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTASR 702
            L V DTNWLI +      LGD K   + +  +    AVLIP+ V RELD     G  +S R     A R + S+  +  G    F  V GQ D E+Y D G+H  P  L+ DDSILNCCLFF++   +   V LCT D N  IRAK   + T  +
Sbjct:  100 LFVIDTNWLIKEPEVARGLGD-KIHALGLIKK---VAVLIPRAVWRELD-----GLSKSARECKNNAQRAIRSIYNEF-GRQSSFRTVLGQMDHEIYTDKGHHINPRALKNDDSILNCCLFFSRNQGSV--VHLCTADKNLLIRAKVEQVQTIEK 242
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BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A162WQ14_PHYB8 (PINc domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162WQ14_PHYB8)

HSP 1 Score: 76.6 bits (187), Expect = 1.700e-12
Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 1 
Query:  232 LSTPTAPE----LVVFDTNWLIHDLGDAKCRVVDIAARHVSTAVLIPKEVMRELDRLK-TSGKDESTRYKAREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTAS 699
            L +PT  E    ++V DTN+LI +LG  +  +   A       +++P  V+RELD LK    +D++      E  R ++  LEK   N  + P +RGQ+  E+Y       K     GDDSIL+CC++F   ++  + VTL + D N +I+A  +G+ T S
Sbjct:   61 LVSPTGIEQCHQVIVLDTNFLISNLGYLQSLLTKTALHPNVITLVVPWAVVRELDGLKYAKSRDKNGGATLGELARTVMRFLEKELRN--KTPCLRGQKSNEIY-----DPKAKKALGDDSILDCCMYFMHSVS--KYVTLFSNDRNLSIKAMIHGIDTLS 212
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BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A077W7A6_9FUNG (PINc domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077W7A6_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 7.080e-12
Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 1 
Query:  253 ELVVFDTNWLIHDLGDAKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGKDESTRYK----AREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTAS 699
            ++ + DTN+LI +L   +      A  H S  +++P  V++ELD LK     + TR      AR+A +++   L + R      P +RGQ+  E+Y      EK    +GDDSIL+CCLFF   +   ++VTL T D N AI+A  + + + S
Sbjct:   74 QVAILDTNFLISNLAYLRTLTSQAAKYHGSLVLVVPWIVVKELDGLKGMNHQQITRGDLGDLARKAMKFIEGALRERR------PWLRGQKSYEIY-----DEKAKLSKGDDSILDCCLFFHNRMG--KRVTLLTNDRNLAIQAMIHDVRSLS 213
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BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A068SE92_9FUNG (PINc domain-containing protein n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068SE92_9FUNG)

HSP 1 Score: 73.9 bits (180), Expect = 1.820e-11
Identity = 52/153 (33.99%), Postives = 80/153 (52.29%), Query Frame = 1 
Query:  253 ELVVFDTNWLIHDLGDAKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGKDESTRYK----AREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTAS 699
            ++ + DTN+LI +L   +      A  H S  +++P  V++ELD LK     + TR      AR+A R++   L + R      P +RGQ+  E+Y      E     +GDDSIL+CCLFF   +   ++VTL T D N AI+A  + + + S
Sbjct:   75 QVAILDTNFLISNLAYLRTLTSQAAKYHGSLVLVVPWIVVKELDGLKGMNHQQITRGDLGDLARKAMRFIEGALRERR------PWLRGQKSYEVY-----DENAKLSKGDDSILDCCLFFHNRMG--KRVTLLTNDRNLAIQAMIHDVRSLS 214
[Close]
BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A2T0FKL0_9ASCO (Transcriptional protein SWT1 n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FKL0_9ASCO)

HSP 1 Score: 71.2 bits (173), Expect = 1.130e-10
Identity = 56/151 (37.09%), Postives = 78/151 (51.66%), Query Frame = 1 
Query:  247 APELVVFDTNWLIHDLGDAKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGKDESTRYKAREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTAS 699
            AP  +V DTN+LI +L D   ++V+I A   S  V+IP  V+ ELD LK+  K   T  KARE   Y+   L +        P +RGQ  +E  + +        L+GDDSIL+CC FF+    T     LC+ D N   +A +N + T S
Sbjct:    2 APSTLVVDTNFLISNL-DLVEQLVEIHAEF-SHVVVIPGTVLEELDGLKSGTKQ--TSRKAREVIHYIHKKLAETN------PGIRGQRLSEFVQSN--------LKGDDSILDCCRFFSARSFT----VLCSNDRNLCAKALTNEIKTVS 130
[Close]
BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A0B7MXZ1_9FUNG (PINc domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MXZ1_9FUNG)

HSP 1 Score: 71.2 bits (173), Expect = 1.340e-10
Identity = 57/151 (37.75%), Postives = 82/151 (54.30%), Query Frame = 1 
Query:  253 ELVVFDTNWLIHDLGDAKCRVVDIAARHV-STAVLIPKEVMRELDRLKTSGKDESTRYKAREANRYL-LSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTAS 699
            E+ V DTN+L+  LG     V+D+A     S  VL+P  V+RELD LK    D S    AR+A R++ L L EK          +RGQ+  E++ +D    K   ++GDD IL+CCL+F Q   T +KVTL + D N  I+   + + + S
Sbjct:   63 EICVLDTNFLLSKLGYLDT-VLDLARESPGSLLVLLPWVVIRELDGLKQGNPDISAG--ARKAMRFIELRLREK-------IVSLRGQKMNEVWSEDML--KNQNIKGDDRILDCCLYFQQ--MTQKKVTLLSNDRNLCIKVMVHDIDSIS 199
[Close]
BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Match: A0A1X0RNC2_RHIZD (PINc domain-containing protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A1X0RNC2_RHIZD)

HSP 1 Score: 69.3 bits (168), Expect = 4.510e-10
Identity = 46/150 (30.67%), Postives = 82/150 (54.67%), Query Frame = 1 
Query:  253 ELVVFDTNWLIHDLGDAKCRVVDIAARHV-STAVLIPKEVMRELDRLKTSGKDESTRYKAREANRYLLSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLFFTQGITTPRKVTLCTGDNNFAIRAKSNGLGTAS 699
            ++ + DTN+LI +L   +  ++++A  ++ S  +LIP  V+RELD LKT  + E     +R+A +++ S L        +   +RGQ   E    D  + +   L+GDD IL+CC++F   +TT + + L + D N  I+   +G+ + S
Sbjct:   63 QIAIVDTNFLISNLKSLQT-LLNLAEENIGSLLILIPWVVIRELDSLKTCNRKEEVAILSRKAMKFIESQLRS------QVKSIRGQRLHETL--DQSNMQNDKLKGDDRILDCCMYFQ--LTTHKPIVLLSNDRNLCIKVMVHGIESIS 201
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11601.1035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LLH7_ECTSI3.800e-11267.44PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JRN9_9PHAE2.380e-10967.05PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3XKL4_HETAK5.930e-2144.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XI71_9EUKA1.420e-1740.65Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
A0A162WQ14_PHYB81.700e-1233.54PINc domain-containing protein n=1 Tax=Phycomyces ... [more]
A0A077W7A6_9FUNG7.080e-1233.99PINc domain-containing protein n=1 Tax=Lichtheimia... [more]
A0A068SE92_9FUNG1.820e-1133.99PINc domain-containing protein n=1 Tax=Lichtheimia... [more]
A0A2T0FKL0_9ASCO1.130e-1037.09Transcriptional protein SWT1 n=1 Tax=Wickerhamiell... [more]
A0A0B7MXZ1_9FUNG1.340e-1037.75PINc domain-containing protein n=1 Tax=Parasitella... [more]
A0A1X0RNC2_RHIZD4.510e-1030.67PINc domain-containing protein n=4 Tax=Rhizopus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11601contigH-paniculata_contig11601:3..5905 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score93.2
Seed ortholog evalue1.9e-16
Seed eggNOG ortholog227086.JGI_V11_73744
Preferred nameSWT1
KEGG koko:K01669
Hectar predicted targeting categoryother localisation
GOsGO:0000956,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006351,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071025,GO:0071027,GO:0071028,GO:0071032,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097659,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
EggNOG free text desc.nuclear mRNA surveillance of mRNP export
EggNOG OGsKOG4689@1,KOG4689@2759
EC4.1.99.3
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons6
Model size777
Cds size777
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11601.1035.1prot_H-paniculata_contig11601.1035.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11601 3..5905 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928871.009784-CDS-H-paniculata_contig11601:2..1191622928871.009784-CDS-H-paniculata_contig11601:2..119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 3..119 +
1691480651.356535-CDS-H-paniculata_contig11601:2..1191691480651.356535-CDS-H-paniculata_contig11601:2..119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 3..119 +
1622928871.0240242-CDS-H-paniculata_contig11601:539..6481622928871.0240242-CDS-H-paniculata_contig11601:539..648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 540..648 +
1691480651.3671494-CDS-H-paniculata_contig11601:539..6481691480651.3671494-CDS-H-paniculata_contig11601:539..648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 540..648 +
1622928871.0338614-CDS-H-paniculata_contig11601:1741..19411622928871.0338614-CDS-H-paniculata_contig11601:1741..1941Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 1742..1941 +
1691480651.375666-CDS-H-paniculata_contig11601:1741..19411691480651.375666-CDS-H-paniculata_contig11601:1741..1941Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 1742..1941 +
1622928871.0468657-CDS-H-paniculata_contig11601:3029..31331622928871.0468657-CDS-H-paniculata_contig11601:3029..3133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 3030..3133 +
1691480651.3880985-CDS-H-paniculata_contig11601:3029..31331691480651.3880985-CDS-H-paniculata_contig11601:3029..3133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 3030..3133 +
1622928871.0574498-CDS-H-paniculata_contig11601:3744..38441622928871.0574498-CDS-H-paniculata_contig11601:3744..3844Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 3745..3844 +
1691480651.3974266-CDS-H-paniculata_contig11601:3744..38441691480651.3974266-CDS-H-paniculata_contig11601:3744..3844Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 3745..3844 +
1622928871.074241-CDS-H-paniculata_contig11601:5758..59051622928871.074241-CDS-H-paniculata_contig11601:5758..5905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 5759..5905 +
1691480651.414338-CDS-H-paniculata_contig11601:5758..59051691480651.414338-CDS-H-paniculata_contig11601:5758..5905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11601 5759..5905 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11601.1035.1

>prot_H-paniculata_contig11601.1035.1 ID=prot_H-paniculata_contig11601.1035.1|Name=mRNA_H-paniculata_contig11601.1035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=259bp
KSVEDRYADGWALNASTHRWIKVAIQQKKAAIEAQPALLARLEVLECKVK
LSAQKSQLLETKAEKILEEQSKRPTVVLSTPTAPELVVFDTNWLIHDLGD
AKCRVVDIAARHVSTAVLIPKEVMRELDRLKTSGKDESTRYKAREANRYL
LSLLEKPRGNGREFPVVRGQEDTELYRDDGYHEKPGYLRGDDSILNCCLF
FTQGITTPRKVTLCTGDNNFAIRAKSNGLGTASRPQCRPGNCPLPLCPAP
PRLSPFMR*
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mRNA from alignment at H-paniculata_contig11601:3..5905+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11601.1035.1 ID=mRNA_H-paniculata_contig11601.1035.1|Name=mRNA_H-paniculata_contig11601.1035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5903bp|location=Sequence derived from alignment at H-paniculata_contig11601:3..5905+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGAGCGTGGAGGACCGCTACGCCGACGGGTGGGCGCTGAACGCTAGCAC
ACATCGCTGGATCAAAGTCGCCATCCAGCAAAAGAAGGCCGCCATCGAGG
CACAACCGGCTCTCTTGGTGAGCTAGCGATCAGTAAGGAAAATGTTCACA
TATTTAGGTTATATAATGCACTGTCCTTCTTTTCCAGCCTTTTTAGCATA
TTTTTAGCTTGTCCAGATTTTGTTCCTGAACCGTTGGTGATGATGATCGA
CCTGTACAAAAAAACAAGCTACACAACTATCATGTAGCGGAATGGATAAC
GCTCAATGTCGTTTGCGTGTTTGCAACGTGGAGTAGTTGGGAGTTGCACA
CCTCTCTACGATTGATTTTGATCACAGCCAACTTAACGTTTTGTTTGGGC
TGGCCCACCTACTGAAGGTTGACGTGTTGTTGCTGTTTTTAGCATTCCGG
AATTGCACTCCTCTCTCCGTACTCGTGAAATTGAACAAAAATCTTATCTG
GTCGACGTTTGTTTTTATGTCGGGCGCTATGGTGAAGGCTCGACTGGAAG
TGCTGGAGTGTAAGGTAAAACTGTCCGCACAGAAATCCCAGCTGCTGGAA
ACCAAGGCGGAAAAAATTCTGGAGGAACAGAGCAAAAGACCCACCGGTGA
GAAGGGCAGATGTAGTGCAACCCAAAAACCACACCGTAAATGGTAAACAG
GCGTTCGTGATTACGCGGTCGATGTGGCTCAATCTTGACATGCCATGAAC
GTTCAGATAGCTAATCGCAAATCGATCTATCTTCGGCGTGAACGCGGGGC
GGGTGGCAGATACACTAATTTTTTTGGTAGAGACCTTGTGGATACTGCCA
CCGACCAAACCGTACACTAGCGTGAACCAGCTTCTGCGGTATATTAATAG
ATTGCGCAGACTTTTATTGTTTTCGGCATCCTGGCATTGTTGCTTGATCC
CCAACGGTTCTCCCGCTTTGACATTTGACATATTTTTCGTGCTCCCATAC
GTATACGTGGCTAGTCGTCCCGACCCAAAAAACCCAGAAGGAGGAAGTGG
ATACCTTGTTCGTTCTTTTAACGTGCCTTGATTATTCTGGTCTGAGCTAC
TCACCACATTAGTGTTTTTGTACCGTACCCCATGGACAGCCTCCCCTAGC
TTTCCTCTGATAAATTGAAGAACTAGCCTTCTCTCTTTCTTTGACCCTTC
AACACCGGTTCTCCCCAACAAGTACCCATCTAATTTTCACCTCAAGAGAA
AGGGAAAATGACGCCTGTGTAATGATATTGTTACGGGGATAGGGAGCCGC
CCATATTCAGACTGTTAGTCCAGCACAGGCAGCACGGAAAGGTGGGTTGG
CATGGTTCTTCCTGCCCACAACCATTATAGCGCTCCATGTTCGTTGTAAG
ATCATGTTTTTTTTTCCGAGATGGCCGCAGGCGCTGTAATGGTCCATTTT
GCGTTGTCTCCATGATGTTCTCCACGTGCTGTTGTGTACCACTGCTTTGT
TGTCTTTTGTACACGAACAATCTCGGAACCCTGTGAACATATCAAATCAC
TTCCTGTGTCTGCTTCGTTTTCTGGTCTCGGCTCTACTGGTAGTTCTTCT
CAGGCACAGCTTTCTTCTCTACACCCGCGATTTCTGAAGTGACGCAGAAG
CGAACAGAACAAGGCCCCGAAATGAAACAACTTACTCCTGCTTTGTCGAC
TGTCATATTGTCTGTACTGTGCTGTCGTTCATGGTACAGTCGTCTTGTCG
ACACCAACAGCCCCCGAGCTCGTCGTGTTCGACACCAACTGGCTCATCCA
CGACCTCGGTGACGCCAAGTGCCGCGTTGTCGATATCGCCGCCCGACACG
TGAGCACGGCGGTGCTGATTCCGAAGGAGGTCATGAGAGAGCTGGACAGG
CTGAAGACGAGCGGGAAGGACGAGTCGACCCGCTATAAGGTCTGTTGTAT
TAAATCTTTGTTTTTATAGTGTATATATACTGTTTCTTATCGTTTGGTGT
ACAGTATCCCCACGAAGGGCTTGGCCATGTGTTTGAGTCTTGCTCCAGCA
TAACTTTTTTTTCCACCTCTGTGTCTAATACCTCGCTTGTACTCCCGTTG
TCGTTTGTTGGAGGCACGAGGCCAATTAAAAAGTCTCTCACCTGACAAGA
TGATCAAGCGCACCACGCTCGTCGCGGTATTGATTGTTGACGGACACTAT
AGAGACCTTGACCCCTAAGATAAATCTAAGCAAAACGATGCTGGCGGCAG
CGAAGTTCGAATCGACTTCACCTGGGTGTTAGAAGGGATAACTTGCTAAA
CTGATCATACCACAACGGTATCTATCCGCAGGTAGAATTGTTTTCGTGGA
TTGGTATTGCAAGAATTCGGAGGAAATACAGCTAAACAGCCTCGCTGACC
CCTGAACAAAGTGACATTGTGTACCATACGTGAGGTGTAGCTTGTTGGTT
TTAGGGCTTGACTAGCTGTTGCAGCATGGTGTAATTCTCGCGTGGTCATG
TCGTCGTCCATGGCGACGCAAGTACGTTGTTGTAGTGCGTGGTATTTTGT
CTTAAGCGGTGTGCCTGGTCGGTGCCTTGTGTTTTTCTGTGTATGTCGTC
TGACAACAAGGTATTAGTAGAAAATTGAACGTTTCGCGAAGAGGAACAAA
CTCAAAATACACATGAGCTAGCAGAAGAGACGCAAGTGGCACAACGAAAA
TACATGCATCACAGCAGAACATTGCCTGGTATGTATGAAGCCCAATGGCA
GGAAAGCAGAAGGTTTGTTGTGATGTGATGATCGAGTGAGTCAGTATCTC
ACAGTACCCTACCCTCGTTATCGTTTTGGCAAACAAGTGCCGTGTTCTAG
TCCCTCTCCCGAAACCCCATACCTGCCGACATTCGATGACTTTAGCCCCT
CCCTCCCCCCCAAAGCTCCCCAAGGAGGCGTGGTCAATGGTCCAACAACT
ATGACACATAATACATGGGTACTTTTCTCCCCCCCATCCCCGCGTCCCCC
CAACCAAAACCCGAACGTATGCGTCAGGCACGAGAGGCTAACCGATATCT
GTTGTCTCTCCTCGAGAAGCCTCGGGGGAATGGCAGGGAATTCCCAGTCG
TGCGCGGCCAGGAGGATACTGAGCTATACCGGTGGGCTGCCGCGGTGTCA
CGATGCCTCCTCCGTGGAAAATGATGTTGACGTTGCTGTTGGTTTTGCGA
CAAGGAACTAAAAGGACGGACACCGAGTGTCAAGTAGTGTATAATACCCA
ATATTTCTTCCTATTTCGTCTCAACAGAGACACCAACAGTAAATTTCGGT
TAAGTACGGTGTATTGTACCTGTGCTGTACCCGCACTGATCTGAAGTGTC
GGCATGCACATTATTTTCTAGCTGTTTGGGAGAGCCGAGATAGCACCGGA
TCAGATTCAAACGAAGTCGGACCGGAGTCTTCGAACTTGGCATGAAACCT
GTGTTGAAAAATCGAAAACGCCTCTTAAACACACGCCGCGAGCGCAGTTC
TTCTCAAAGTGAGGCCACGGTTAGAAGAACGAGAGCACGTTCTCGTGAAG
CAGAAGACGCTGATCTTATGAAAATAGCGTCGACGGTTGTGTTACTACTG
TGCAGCGTACCGGGTGGTGGTGAACATGAACGCCACTGAACTACAACAAT
GGTTGAATCATCGGTGGGCGATTTCTTGCGCAAGAGGGATAATTAGTATG
ACCCCCCCCCTCCCCCCCGTGCCACTTACACTGATGCCGTAGGGATGACG
GATACCACGAGAAGCCTGGCTACCTTCGTGGGGACGACTCGATCCTCAAC
TGTTGTCTGTTCTTCACGCAAGGGATTACGACGCCTCGCAAGGTGGGTGG
AAAGGAGACAAAAGAGAGGACATCACGTTTTGTTTTGTCGGGGAGGAGGG
GGGCATGGTTCATGTGAGTGCTCTATACAGCAGTTTATTCAGTTTCTGCT
ATTTTGGGGGGTGAGGAGGTGCTCGTTTTCGATTGTAAAGTCGTTTTTAC
TTTACGTGTGTGTGCTTTATACATCAATTCATTTTGTTTCTTCTTTTGGG
GGGGGGGGTATGGGGGTATGCTCGTTTTCGATTGTAGGGTCCTTTTCATT
TTGTTCCCCCTTTTGTATCTAGGGCGTGGCATAACGAACTCTAAAATGAA
ACGAAAACGAAAAAAGAAAAGGGTTTGTGATACAGCAATTGTTGCGCCTT
AGGCGTGAAACGCAACAAAAACGTTTTTGTCTTCCAAAAGGTTAATCAAG
ACCAATAAAAATCAAAGAAAAACGTTCGTTCAGAATGGTGAAATGGCGGT
GCCTTGTTACCACCACGTCATCTTTGCCTCGGCCCCTTTGCCTAGGCTCA
TGGTGACGTGACGTACGAGTGCCTGAACTCCTATCCCGCTCGTACAGCAT
TACCTGTAGACACCTCCGGTAGACGCTCAGCACCTCGACGCAAAGCTAGT
CTACCAGAGCTCGGATTGCTTCGATTCAGTGACAGCGGTTTGATGAAGAG
TGAGCAGTAATAGCAATTGCCGAAACTTGTTGCCCTCAGTTTTGTCCAAA
AGCTACAGGTGGTCGCCGTCTTTGCTGCTTTGCATTTTTACGCAAACATA
TTTCACTCAGTTGTTGACAGGGTCAACTCAAACCAAGCATATTATACGTG
GTCAAATAAGAGCTACCTATCGGACCATCTAGCTTTGTTTCGGAGGCATT
TTAGTTTTCGCGGTCAACGTGTGATACAGTTGGATTGGGGGGTGTTGTTT
TATATTTGATCGTTGCCATTCATTTTCCAGACTGCATTTGCATTCCGACC
CTTTAGGCCCCGGATCACACTGTGAGAGACGTGTTCGTTGGTTCACCCTT
GCTCTTGTCTGTAGTAGTGGTGTTTACTTCGTGACGATGATTGGGTATAA
ATGTTTGCTCGATATTATGATATTGTCGTTTTGAGGACAACCCTTTCGTG
TCTGTAACTTGATCCCCTGCAACCAAATCTGATCGCCTATTGCACCTGCT
GTACGAATCATTAATATTCGTTTCCAGCAGGGCTACGCATTTTGATTATT
CTGGACTCATGCCATCAACCAAAGTGTTTATTCATATCTCTTTTGAGGGT
TCAGGGGATAGCTACGTTATGGACGCGCCTGATGACATGTTGGGCTAACT
CAATTCCACCAGTCGACCATGATAGTGTATGATGTATGGGTAAGAGTACT
CTGAAGGTTAGTTTCCATTGGTACCTGTCGCGATGGACTTACTCAAACGT
ACCCATGTGCAGCTAATACCCGCGGGTACCATGGTATATATACCCTTTCA
TATCGACTTACGCAGAGTTTGAACCTGGTATCGATCTCGGCTCCTTTGCA
GCACACCCTAACGTCTTCCTAGTAACAGTCAAACGAGTCGAAAGGCGATA
TGAAACGCTGTGTGGCTTCAAGACGAAGTAGTAATCTTGAGCTTCTCTAC
CAAAACTCCAGGTACCCCAACATCCAGCAGCACACGAGACCCCCTTTGGT
CTTGGGCTCGGTGGAGTCAGTCTCAAATGTGTCCACTCTGCTCCATATGT
TGCCTGTCCTACCCACAATGTAGATCACTTCGTTCAGATAGAACGCATTC
CTACCCCCCCCCCAGTATTCGCCCTGTAGGCTGTCAAATAAAAATTCTGC
CAAGGAAAAGATACAAATGCATTGGGAATACACCCAAGGGCGAGCGCCCA
CTGCACATCCCCGCTCTAATGACGGATGCTGACGTTTCCCTCCTTGCGTC
TTGAAGGTGACTCTGTGCACTGGAGACAACAACTTCGCGATAAGGGCTAA
ATCCAACGGACTGGGCACAGCGAGTCGCCCGCAGTGCCGCCCGGGTAACT
GTCCTCTGCCGCTGTGCCCTGCCCCGCCTCGTCTGTCGCCGTTTATGCGT
TGA
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Coding sequence (CDS) from alignment at H-paniculata_contig11601:3..5905+

>mRNA_H-paniculata_contig11601.1035.1 ID=mRNA_H-paniculata_contig11601.1035.1|Name=mRNA_H-paniculata_contig11601.1035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1554bp|location=Sequence derived from alignment at H-paniculata_contig11601:3..5905+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGAGCGTGGAGGACCGCTACGCCGACGGGTGGGCGCTGAACGCTAGCAC
ACATCGCTGGATCAAAGTCGCCATCCAGCAAAAGAAGGCCGCCATCGAGG
CACAACCGGCTCTCTTGAAGAGCGTGGAGGACCGCTACGCCGACGGGTGG
GCGCTGAACGCTAGCACACATCGCTGGATCAAAGTCGCCATCCAGCAAAA
GAAGGCCGCCATCGAGGCACAACCGGCTCTCTTGGCTCGACTGGAAGTGC
TGGAGTGTAAGGTAAAACTGTCCGCACAGAAATCCCAGCTGCTGGAAACC
AAGGCGGAAAAAATTCTGGAGGAACAGAGCAAAAGACCCACCGGCTCGAC
TGGAAGTGCTGGAGTGTAAGGTAAAACTGTCCGCACAGAAATCCCAGCTG
CTGGAAACCAAGGCGGAAAAAATTCTGGAGGAACAGAGCAAAAGACCCAC
CGTCGTCTTGTCGACACCAACAGCCCCCGAGCTCGTCGTGTTCGACACCA
ACTGGCTCATCCACGACCTCGGTGACGCCAAGTGCCGCGTTGTCGATATC
GCCGCCCGACACGTGAGCACGGCGGTGCTGATTCCGAAGGAGGTCATGAG
AGAGCTGGACAGGCTGAAGACGAGCGGGAAGGACGAGTCGACCCGCTATA
AGTCGTCTTGTCGACACCAACAGCCCCCGAGCTCGTCGTGTTCGACACCA
ACTGGCTCATCCACGACCTCGGTGACGCCAAGTGCCGCGTTGTCGATATC
GCCGCCCGACACGTGAGCACGGCGGTGCTGATTCCGAAGGAGGTCATGAG
AGAGCTGGACAGGCTGAAGACGAGCGGGAAGGACGAGTCGACCCGCTATA
AGGCACGAGAGGCTAACCGATATCTGTTGTCTCTCCTCGAGAAGCCTCGG
GGGAATGGCAGGGAATTCCCAGTCGTGCGCGGCCAGGAGGATACTGAGCT
ATACCGGCACGAGAGGCTAACCGATATCTGTTGTCTCTCCTCGAGAAGCC
TCGGGGGAATGGCAGGGAATTCCCAGTCGTGCGCGGCCAGGAGGATACTG
AGCTATACCGGGATGACGGATACCACGAGAAGCCTGGCTACCTTCGTGGG
GACGACTCGATCCTCAACTGTTGTCTGTTCTTCACGCAAGGGATTACGAC
GCCTCGCAAGGGATGACGGATACCACGAGAAGCCTGGCTACCTTCGTGGG
GACGACTCGATCCTCAACTGTTGTCTGTTCTTCACGCAAGGGATTACGAC
GCCTCGCAAGGTGACTCTGTGCACTGGAGACAACAACTTCGCGATAAGGG
CTAAATCCAACGGACTGGGCACAGCGAGTCGCCCGCAGTGCCGCCCGGGT
AACTGTCCTCTGCCGCTGTGCCCTGCCCCGCCTCGTCTGTCGCCGTTTAT
GCGTTGAGTGACTCTGTGCACTGGAGACAACAACTTCGCGATAAGGGCTA
AATCCAACGGACTGGGCACAGCGAGTCGCCCGCAGTGCCGCCCGGGTAAC
TGTCCTCTGCCGCTGTGCCCTGCCCCGCCTCGTCTGTCGCCGTTTATGCG
TTGA
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