prot_H-paniculata_contig3989.10337.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3989.10337.1
Unique Nameprot_H-paniculata_contig3989.10337.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length277
Homology
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A6H5KIY4_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY4_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 3.350e-53
Identity = 90/146 (61.64%), Postives = 105/146 (71.92%), Query Frame = 0
Query:   79 GLAEAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVAAAKE 224
            G  E   ED + C+MC+RG  D     EG I+GPF     RG+ PR +WVH  CA YSPEV ++ DG   NV KA RRGA L C AC +KGATVGCFNGRCR VYHVPCARSH GWDFE++DRGK FYC++HQEG+S  E+AAAKE
Sbjct: 3006 GATEDPKEDGTFCHMCRRGKSDPFVAKEGRIIGPFRGVVVRGQ-PRQLWVHRKCAEYSPEV-EEVDGELENVAKAIRRGASLKCFACGKKGATVGCFNGRCRTVYHVPCARSHAGWDFEKADRGKEFYCLMHQEGKSEAEIAAAKE 3149          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: D8LQQ1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ1_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.100e-52
Identity = 89/143 (62.24%), Postives = 104/143 (72.73%), Query Frame = 0
Query:   82 EAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVAAAKE 224
            E   ED + C+MC+RG  D     EG I+GPF     RG+ PR +WVH  CA YSPEV ++ DG   NV KA RRGA L C AC +KGATVGCFNGRCR VYHVPCARSH GWDFE++DRGK FYC++HQEG+S  E+AAAKE
Sbjct: 1708 EEPKEDGTFCHMCRRGKSDPFVAKEGRIIGPFRGVIVRGQ-PRQLWVHRKCAEYSPEV-EEVDGELENVAKAIRRGASLKCFACGKKGATVGCFNGRCRTVYHVPCARSHAGWDFEKADRGKEFYCLMHQEGKSEAEIAAAKE 1848          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A7S2XYR1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYR1_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.840e-24
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 0
Query:  126 IWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQ 211
            +WVH+NCA++SPEV    DG+W NV  + RR   L C+ CD  GA++GC +  CR  YH+ CA    GWDF+RSD+GK F C  H+
Sbjct:   19 VWVHQNCAAFSPEVMFCGDGLWFNVCASVRRAKALACTYCDGGGASIGCRSKICRQSYHLSCAALGTGWDFQRSDQGKLFLCREHR 104          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A7R9U1T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1T6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 9.010e-20
Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = 0
Query:   83 AVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVS-KDEDGVWSNVVKAARRGARLMCS--ACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEG 213
            +V +++S C +C    +D ++       GPFL    RG +   +WVH NCA++SPEV     D    NV+ A +RG ++ C+   C RKGAT+GCF  +C+  YH+ CA +  GW F    R   F+C  H+EG
Sbjct:   30 SVTDEIS-CELCGGKENDLDS-----CEGPFLMPPFRGPNNEMVWVHANCATWSPEVYLSTRDQALCNVLSAVKRGKKVKCALEGCGRKGATIGCFVRKCKRSYHLRCALA-TGWCFRGQAR---FWCEEHREG 153          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: M4B1M4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1M4_HYAAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.140e-16
Identity = 50/129 (38.76%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   91 CNMCKRGPDDQEAYVEGDIVGPF-LDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIE 218
            C  C  G DD    + GD +G + L Y       + ++VH+ CA  SP +  + DG W NVVK  RRG  L+C AC+++GAT+GC    CR+ YH  CA S  GW  ++      F+C  HQ  R+  E
Sbjct: 1294 CAFCGVGDDDAMLKLPGDGMGVYPLMY-----GAQRVFVHDQCAIASP-LCFNRDGNWYNVVKEIRRGRSLVCVACNKRGATIGCTIAACRNSYHWKCAISF-GWSVDQMQ----FFCPAHQPRRTEQE 1411          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A0L0FHE8_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FHE8_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 1.760e-16
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   59 GEEEXXXXXXVVGMGLDSSLGLAEAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVAAAKEADARKRAAV 233
            GEEE      ++ +G  +     +      +VC++C RG +  +    G++ GP   YQ   KS  +IWVHENCA ++PE   +E+ V   +    +RG++  C+ C   GAT+GC    C+  +H PC ++  G    RS+    F C+ H+E  + +      ++D  K   V
Sbjct:  660 GEEEDSEEEPILAIGSST-----KDEKRSKTVCSLCARGDNVDDL---GELDGP---YQNARKSMDDIWVHENCAEFTPEFYVNEENVPCGLPSIVKRGSKTKCNHCKLFGATIGCQLKSCKKSFHYPCIQAAGGVRQRRSEEFPVF-CITHKEYINKVPSEKVDKSDKPKAKPV 822          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A0P1A932_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A932_PLAHL)

HSP 1 Score: 87.8 bits (216), Expect = 9.320e-16
Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 0
Query:   81 AEAVAEDVSVCNMCKRGPDDQEAYVEGDIVG--PFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVA 220
            AE   E +  C +C  G DD    + GD +G  P +         + ++VH+ CA  SP +  + DG W NV +  RRG  L+C AC+++GAT+GC    C++ YH  CA ++ GW  ++     HF+C  H+  R+   VA
Sbjct: 1275 AENSDEALLPCALCGIGDDDAMLKLPGDGMGIHPLI------VGVQRVFVHDQCAIASP-LCFNRDGNWYNVTREIRRGRALLCVACNKRGATIGCTISACQNSYHWKCAINY-GWSVDQL----HFFCPDHRTERNVENVA 1404          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A4D9DDC7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDC7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.310e-15
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 0
Query:   90 VCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSK-DEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQ 211
            +C +C +G  + +      + GP L         R +WVH++CA +SP+     EDG W N++   RRG +  C  C++ GAT+GC+   C   YH PCA +  GW F       +F+C  H+
Sbjct: 1383 LCALCGKGHSEAQP-----LPGPVLGSHPLKIRDRPVWVHDDCAHWSPQTFVGQEDGRWYNILVEVRRGRKTKCKGCNKLGATIGCYVRTCSRSYHYPCAVA-TGWTFSPE---VYFHCEKHR 1496          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A2U1J5C0_SMIAN (PHD-type domain-containing protein n=1 Tax=Smittium angustum TaxID=133377 RepID=A0A2U1J5C0_SMIAN)

HSP 1 Score: 84.3 bits (207), Expect = 1.390e-14
Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = 0
Query:   75 DSSLGLAEAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDE----DGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVH 210
            D  LGL  +    +   +  KR  DD E  V+    G        G+  R  WVH++CA +SP V  +E    D VW NV K   RG  + C +C  +GAT+GCF+ +C+  +HV C+    G    +   G  +YC  H
Sbjct: 1114 DDMLGLFASEYPFIVSLSKTKRAGDDTEKDVQDSKKGD-------GEYKR-FWVHDSCARFSPRVLVEERCGQDAVWYNVGKEVSRGRNIKCGSCGMRGATIGCFDSKCKKSFHVRCS----GMPLSKFQLGYVYYCPKH 1241          
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A484DRG0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRG0_BRELC)

HSP 1 Score: 84.0 bits (206), Expect = 1.880e-14
Identity = 52/143 (36.36%), Postives = 72/143 (50.35%), Query Frame = 0
Query:   78 LGLAEAVAEDVS----VCNMCKRGPDDQEAYVEGDIVGPF-LDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRS 215
            LG+A   AE+       C  C  G DD    + G+ +G   L Y       + ++VH++CA  SP +  + DG W NV +  RRG  L+C AC R+GAT+GC    C   YH  CA +  GW  ++     HFYC  HQ  R+
Sbjct: 1266 LGVAPTPAENTDNALIPCAFCGVGNDDAMLKLPGNGMGVHPLIY-----GAQRVFVHDHCAIASP-LCFNRDGKWYNVTREIRRGRSLVCVACSRRGATIGCTVSACPASYHWKCAIN-LGWSVDQL----HFYCPDHQGRRT 1397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIY4_9PHAE3.350e-5361.64PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LQQ1_ECTSI1.100e-5262.24PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2XYR1_9STRA1.840e-2450.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U1T6_9STRA9.010e-2038.06Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
M4B1M4_HYAAE1.140e-1638.76Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0L0FHE8_9EUKA1.760e-1629.71Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A0P1A932_PLAHL9.320e-1634.51Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A4D9DDC7_9STRA2.310e-1533.33Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2U1J5C0_SMIAN1.390e-1433.57PHD-type domain-containing protein n=1 Tax=Smittiu... [more]
A0A484DRG0_BRELC1.880e-1436.36Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13771zf-HC5HC2Hcoord: 129..210
e-value: 3.7E-12
score: 46.3
NoneNo IPR availablePANTHERPTHR13763:SF9BRCA1-ASSOCIATED RING DOMAIN PROTEIN 1coord: 125..228
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 85..213
e-value: 1.6E-22
score: 81.9
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 125..228
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 88..211
score: 15.861

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3989contigH-paniculata_contig3989:11952..15522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3989.10337.1mRNA_H-paniculata_contig3989.10337.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3989 11952..15522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3989.10337.1 ID=prot_H-paniculata_contig3989.10337.1|Name=mRNA_H-paniculata_contig3989.10337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
SPPPSTATATATATAAATTTTTAAATNSAASIDVSREGASAGDAGSTAAE
ITPAMAEAGEEEGTGTGTVVGMGLDSSLGLAEAVAEDVSVCNMCKRGPDD
QEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNV
VKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSD
RGKHFYCVVHQEGRSAIEVAAAKEADARKRAAVVAQAQRTRAHRGRGRGR
GRGRGRGRGGAGRGRGWGRGRGTGAAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR031099BRCA1-associated
IPR034732EPHD