mRNA_H-paniculata_contig116.1033.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: D8LCY5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY5_ECTSI) HSP 1 Score: 282 bits (722), Expect = 6.140e-93 Identity = 150/201 (74.63%), Postives = 170/201 (84.58%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGSVLELLDAQDLELRILANAISANVLSFSDSLLLTNEACINDYSDSMEDLLDAARGGDCFVRDFALAAVANACAHPVLAARANQLGALHLLRR 603 +AVMGISK+IER P A+SFGPLCHTLSRLAASE AVVAYA RGIK+LVL+DALRPQ VAGIPSVL AALREWED+APCLRE+LGA+QTLCCD TVL VV+AGA+ SVLELLD ++ELR+LA AI+ANVLSFSDSLLLTNE CI+ SDSM LLDA + D +RD+ LAA+ANACAHPVLA A +LGAL LLRR Sbjct: 39 QAVMGISKMIERHPADASSFGPLCHTLSRLAASEHRAVVAYAARGIKLLVLNDALRPQATVAGIPSVLAAALREWEDDAPCLREILGALQTLCCDAATVLPVVDAGALASVLELLDTSNMELRVLATAIAANVLSFSDSLLLTNEECIDGISDSMGILLDAVKSRDGAIRDYGLAALANACAHPVLAGCAKELGALELLRR 239
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: A0A6H5L7F5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F5_9PHAE) HSP 1 Score: 236 bits (602), Expect = 7.390e-76 Identity = 124/163 (76.07%), Postives = 141/163 (86.50%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGSVLELLDAQDLELRILANAISANVLSFSDSLLLTNEACINDYSDSMEDLLDAAR 489 +AVMGISK+IER+P A+SFGPLCHTLSRLAASE AVVAYA RGIK+LVL+DALRPQ VAGIPSVL AALREWED+APCLREVLGA+QTLCCD TVL VV+AGA+ SVLELLD ++E+R+LA A +ANVLSFSDSLLLTNE CI+ SDSM LLDA + Sbjct: 39 QAVMGISKMIERQPADASSFGPLCHTLSRLAASEHRAVVAYAARGIKLLVLNDALRPQATVAGIPSVLAAALREWEDDAPCLREVLGALQTLCCDAATVLPVVDAGALASVLELLDTSNMEVRMLATATAANVLSFSDSLLLTNEECIDGVSDSMGVLLDAVK 201
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: D8LCY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY3_ECTSI) HSP 1 Score: 233 bits (593), Expect = 5.170e-74 Identity = 131/208 (62.98%), Postives = 158/208 (75.96%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGSVLELLDAQDLELRILANAISANVLSFSDSLLLTNEACINDYSDSMEDLLDA--ARGGDCFVRDFALAAVANACAHPVLAARANQLGALHLLRRILHHS 618 +A MGIS +++R + +SFGPLCHTLSRL ASE AVVAYA R IK+LVLDDALRPQ A AGIPSVL AL+ E + CLRE+LGA+QTLC DK TVL+V+ GA+GSVLELL +LEL+IL+ AI+ANVLSFSDSLL+T+E CI+ + D ME LLD +R + RD ALAA+ANAC H VLA RA LGA+ LLRR+L S Sbjct: 40 QAAMGISTMVKRVRIEPSSFGPLCHTLSRLVASEHQAVVAYAARSIKILVLDDALRPQAAAAGIPSVLATALKVREGDTACLREILGALQTLCYDKETVLSVITTGALGSVLELLSTGNLELKILSMAIAANVLSFSDSLLMTHEECIDAFRDRMEALLDPVKSRRFNDMERDLALAALANACGHRVLAERAKDLGAIELLRRVLKKS 247
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: A0A6H5JCG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG7_9PHAE) HSP 1 Score: 221 bits (563), Expect = 3.580e-68 Identity = 124/208 (59.62%), Postives = 154/208 (74.04%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGSVLELLDAQDLELRILANAISANVLSFSDSLLLTNEACINDYSDSMEDLLDAARG--GDCFVRDFALAAVANACAHPVLAARANQLGALHLLRRILHHS 618 +A MGIS +++R + +SFGPLCHTLSRL ASE AVVAY+ R IK+LV+DDALRPQ A AGIPSVL AL+ E + CLRE+LGA+QTLC D TVL+V+ GA+ SVLELL +LEL+IL+ AI+ANVLSFSDSLL +E CI+ + D ME LLD + + RD ALAA+ANAC H VLA RA LGA+ LLR++L +S Sbjct: 40 QAAMGISAMVKRVRIEPSSFGPLCHTLSRLVASEHQAVVAYSARSIKILVVDDALRPQAAAAGIPSVLATALKVREGDTACLREILGALQTLCYDMETVLSVITTGALESVLELLSTSNLELKILSMAIAANVLSFSDSLLTAHEECIDAFRDRMEALLDPVKSHRSNDMERDVALAALANACGHRVLAERAMYLGAIELLRKVLKNS 247
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: A0A7S2S7X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7X2_9STRA) HSP 1 Score: 152 bits (383), Expect = 5.170e-41 Identity = 97/235 (41.28%), Postives = 130/235 (55.32%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGSVLELL---------------------DAQ------------DLELRILANAISANVLSFSDSLLLTNEACINDYSDSMEDLLDAARGGDCFVRDFALAAVANACAHPVLAARANQLGALHLLRRI 606 KA + +S+L+E A SFGPL H L RL +E V A++ R IK+L+LDDALRPQ AG+P VL ALR WE C RE+LGA+QTLC DK VL VV AG ++++L D Q + E +LA AN+L++SDS+LLT E + D + ++ LLD +G D R + +AA+ANA AHPVLA + +LG L +L I Sbjct: 41 KAALELSRLVETTVFPAVSFGPLAHALCRLVPNENRNVAAHSARAIKLLLLDDALRPQAVAAGMPLVLVEALRRWEGEVSCSREILGALQTLCWDKACVLRVVEAGVTTILVDMLAGDSRREDPEEGEGRRSSSIDDEQGFASRGARQRQREAEAVLLAAVTLANILAYSDSVLLTKEEIVLDAARALPALLDLCQGRDKARRCYGVAALANATAHPVLAGKVKELGGLKVLADI 275
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: A0A835YQZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ0_9STRA) HSP 1 Score: 152 bits (385), Expect = 5.550e-41 Identity = 95/216 (43.98%), Postives = 124/216 (57.41%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGSVLELLDAQD-------------LELRILANAISANVLSFSDSLLLTNEACINDYSDSMEDLLDAARGGDCF--VRDFALAAVANACAHPVLAARANQLGALHLLRR 603 KA + +S L E RP + ASF PL H L RL A AYA R +K+ LDDA R A +G+P+VL AALR+W + PCLREVLGA+QTLC ++ + AVV+ G + +LELL A AN+L+F+D++ LT+EACIN + D+MED+L+ A +R AA+AN AHPVLAAR L A LRR Sbjct: 80 KAAVELSTLAESRPFAPASFAPLSHALCRLIPGGGRATAAYAARAVKLFALDDAFRELAASSGLPAVLVAALRQWSEEPPCLREVLGALQTLCWEQASARAVVDGGGVEPLLELLRAPGGARAGXXXXXXXXXXXXXXXXXXXANLLAFADTVFLTDEACINAFFDAMEDILEGAVSAHATAALRLHCAAALANGAAHPVLAARLRGLKAAPALRR 295
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: A0A7S3H243_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H243_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.430e-34 Identity = 83/207 (40.10%), Postives = 119/207 (57.49%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGSVLELLDAQDLELRILANAISANVLSFSDSLLLTNEACINDYSDSMEDLLDAARGGDCFV-RDFALAAVANACAHPVLAARANQLGALHLLRRILHHS 618 KA + ++KL+ A S+GPL H L +L S V +Y+ R +K+L+LDDALR AGIP+V+ A+R+WED CLRE+LGA+QTL DK V +V+ I +++ A D E+ +LA A AN+LS+SD+LLL + M L++ +G R +A AA+ANA +P LA N+ G L L R + S Sbjct: 28 KAAVDLAKLVNGSVFPAYSYGPLSHALCKLIPSNNRTVASYSARALKILLLDDALRQLTVAAGIPAVVCTAVRQWEDEILCLRELLGALQTLTWDKQCVKSVLQTDVISNLILYATATDQEVSVLALATLANILSYSDTLLLADYPTTETLGAGMSVLIETLKGSSQKPQRLYAAAAIANASFNPRLAELLNKHGGLQLCRDVERQS 234
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: A0A482SVR1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVR1_9ARCH) HSP 1 Score: 105 bits (262), Expect = 2.700e-25 Identity = 53/110 (48.18%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 1 KAVMGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVVNAGAIGS 330 KA + +SKL++ A SFGPL H L RL S V +YA R +K+L+LDDALRPQ VAG+P+V+ A+++WE+ CLRE+LGA+QTL DK V V+ + S Sbjct: 32 KAAIELSKLVDGTVFPAVSFGPLAHALCRLVPSLNRTVSSYAARALKILILDDALRPQALVAGVPAVVCVAIKQWEEEVLCLRELLGALQTLTWDKQCVKGVLQCDIVPS 141
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Match: W7TLY9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLY9_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 7.020e-17 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 55 SFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDALRPQVAVAGIPSVLTAALREWEDNAPCLREVLGAIQTLCCDKTTVLAVV 309 SF P+ H L RL S VV +A R K L+LDDALR Q + G+P+VL AL+ W++ PCLRE+LG++QTL DK TV +++ Sbjct: 64 SFAPMAHALCRLLPSHDRTVVYFAARAAKTLLLDDALRGQAVLVGLPAVLLQALQTWQEETPCLREILGSLQTLSWDKHTVKSLI 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig116.1033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig116.1033.1 >prot_H-paniculata_contig116.1033.1 ID=prot_H-paniculata_contig116.1033.1|Name=mRNA_H-paniculata_contig116.1033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp MGISKLIERRPVSAASFGPLCHTLSRLAASEQSAVVAYAVRGIKMLVLDDback to top mRNA from alignment at H-paniculata_contig116:41401..44247- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig116.1033.1 ID=mRNA_H-paniculata_contig116.1033.1|Name=mRNA_H-paniculata_contig116.1033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2847bp|location=Sequence derived from alignment at H-paniculata_contig116:41401..44247- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig116:41401..44247- >mRNA_H-paniculata_contig116.1033.1 ID=mRNA_H-paniculata_contig116.1033.1|Name=mRNA_H-paniculata_contig116.1033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig116:41401..44247- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |