prot_H-paniculata_contig3979.10316.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3979.10316.1
Unique Nameprot_H-paniculata_contig3979.10316.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Match: D7FKV3_ECTSI (GOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV3_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.170e-40
Identity = 96/234 (41.03%), Postives = 131/234 (55.98%), Query Frame = 0
Query:   22 ATVLVEPRETVCFSKFAKEETRFSLDVFVFQGDGIGVTVHYR------------HGGEKPKNIFSAKIFSTGDN-LQDG-----------HKFEAKHPGEYEICLANDHRFEQGTKHVMLNITEKTEDAARGPS--------EPTNGQTKESKDKTEIGNRLETLKEKFDEMRKRQMEERKSLAFREAAAEGNHKSMVRSSIMETVVLLLVSVGQIFFVRRWFQGKGTLLKQWS 223
            +T L+E R  VCF ++ +EET+    VFVF+G  + +    R            HG  K K   SAKI  T +N L+D            +KF+A+  GEYEICL+ND  + Q  KHVML+I+E  ED A            +   G  K  +D   I   ++ L + F+E++  Q  ER  L  R+ AAE N+ SMV+SS++ET+VLLLV +GQI FVR+WF GKGTLLKQW+
Sbjct:   22 STYLIEERAQVCFFRYVEEETKLQAKVFVFKGGNLDIGFSVRGPSQLDDRGNVVHGRTKLKLRKSAKI--TSENILEDNDDSAELFSGYDYKFDAE-KGEYEICLSNDKSYAQEAKHVMLDISEVVEDGATKKHAKDDTTDLQDAGGSPKNKEDLAIITKEMDGLSKVFEEIKSFQELERMQLTQRKTAAEDNNASMVQSSVLETIVLLLVGIGQIIFVRKWFSGKGTLLKQWA 252          
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Match: A0A7S2V1P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1P8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.120e-12
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 0
Query:   72 IFSAKIFSTGDNLQDGHKFE--AKHPGEYEICLANDHRFEQG-TKHVMLNITEKTEDAARGPSEPTNGQTKESKDK---------------TEIGNRLETLKEKFDEMRKRQMEERKSLAFREAAAEGNHKSMVRSSIMETVVLLLVSVGQIFFVRRWFQGKGTLLKQWS 223
            + S++   T +   D   F+      G YE+CL N    + G TK V + I  K  DA +   E   G T+  + +               T+  + +E ++ + D++ ++Q  ER  LA   A  +G+H  M  SS++ET V ++VS+ QIFFVRRWF+GKG   KQW+
Sbjct:  106 VISSEKSGTDEEFGDSLTFDFVPSDVGAYEVCLDNSMSSKMGPTKVVQIAI--KDLDAQKREREVIPGATEMQQQERLAEAHRRLELPESMTQFESNVEAIQGEIDKIYEKQERERHRLAIHTAMNQGSHSRMAMSSLVETGVFVVVSIFQIFFVRRWFEGKGA--KQWA 271          
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Match: A0A4D9D7I6_9STRA (GOLD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7I6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.540e-6
Identity = 28/53 (52.83%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  164 RQMEERKSLAFREAAAEGNHKSMVRSSIMETVVLLLVSVGQIFFVRRWFQGKG 216
            +Q++ER  LA + AA + NH+ MV SS+ ETVV + VS+ Q+F+VRRWF+G+G
Sbjct:  213 KQVKERHRLALQTAANQKNHQKMVVSSVFETVVFIGVSLFQLFWVRRWFEGRG 265          
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Match: TMEDB_DICDI (Transmembrane emp24 domain-containing protein B n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=TMEDB_DICDI)

HSP 1 Score: 55.8 bits (133), Expect = 5.640e-6
Identity = 55/217 (25.35%), Postives = 93/217 (42.86%), Query Frame = 0
Query:    5 LLVTLFFSAGVAVNSIPATVLVEPRETVCFSKFAKEETRFSLDVFVFQGDGIGVTVHYRHGGEKPKNIFSAKIFSTGDNLQDGHKFEAKHPGEYEICLANDHRFEQGTKHVMLNITEKTEDAARGPSEPTNGQTKESKDKTEIGNRLETLKEKFDEMRKRQMEERKSLAFREAA----AEGNHKSMVRSSIMETVVLLLVSVGQIFFVRRWFQGKGT 217
            +LVTLF       +S   T+ VEP+   CF  F +      L   V +G  + + V       K   IF    F T   ++    F A   G Y++C  N     + ++     +T        G  E   G +    D++          +K + + +  + E+K L +RE A    +E  +  +V  +I E +VL+++ VGQI+++R+WF  K T
Sbjct:   12 ILVTLFLIG----SSSALTLQVEPKSQECFYNFIESGKTSLLLYQVIRGGLLDINVKLTD--PKGNTIFERLHFDT--QMKGKQSFTAGESGAYKVCFNN-----EMSRFTAKVVTFTWASEEEGVKEVAKGDSITPMDQSV---------QKIERVLQSVIHEQKKLRYREQANRDTSESTNARVVWWTIAEVIVLVVMGVGQIWYLRKWFDNKST 206          
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Match: A0A5E4MEG2_9HEMI (GOLD domain n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4MEG2_9HEMI)

HSP 1 Score: 55.1 bits (131), Expect = 1.140e-5
Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 0
Query:    5 LLVTLFFSAGV-AVNSIPATVLVEPRETVCFSKFAKEETRFSLDVFVFQGDGIGVTVHYRHGGEKP-KNIFSAKIFSTGDNLQDGHKFEAKHPGEYEICLANDHRFEQGTKHVMLNITEKTEDAARGPSEPTNGQTKESKDKTEIGNRLETLKEKFDEMRKRQMEERKSLAFREAAAEGNHKSMVRSSIMETVVLLLVSVGQIFFVRRWFQGK 215
            L V LF+S  +  VNSI  T  ++ +   C+ +  ++ T  +L+  V  G    V V      E P K I   ++ S  D+    H F A   G Y IC +N+       K V +++    E+   G  E     T+      +I    E+L +  D     +++E KS   R+ A + NH   + S+  ETV +LLV++GQ+FF++R+F+ K
Sbjct:    9 LTVILFYSYFIYLVNSIELTFELQDKSKDCYYENIEKNTSTTLEYQVVTGGQYDVDVII----ESPTKEILYRQVKSQFDS----HTFVAPVSGPYAICFSNEFST-YSHKLVYMDLQVGEEEPLPGIGEQVTVMTQMESTSQDIH---ESLNKIIDYQTHHRLKEAKS---RKRAEDLNHHVTLWSAA-ETVAILLVAIGQVFFLKRFFETK 205          
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Match: A0A8J4Q2E2_9MYCE (GOLD domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q2E2_9MYCE)

HSP 1 Score: 53.1 bits (126), Expect = 4.940e-5
Identity = 48/199 (24.12%), Postives = 85/199 (42.71%), Query Frame = 0
Query:   23 TVLVEPRETVCFSKFAKEETRFSLDVFVFQGDGIGVTVHYRHGGEKPKNIFSAKIFSTGDNLQDGHKFEAKHPGEYEICLANDHRFEQGTKHVMLNITEKTEDAARGPSEPTNGQTKESKDKTEIGNRLETLKEKFDEMRKRQMEERKSLAFREAA----AEGNHKSMVRSSIMETVVLLLVSVGQIFFVRRWFQGKGT 217
            T+ +EP+   CF  F + E    +   V +G  + + V  R    +   IFS   F T   ++    F A   G Y++C  N+          M   T K    +    +  N    +    T +   ++ ++     +    + E+K L +RE A    +E  +  +V  SI E VVL+++ V QI+++RRWF  + +
Sbjct:   24 TLQIEPKSQECFFNFIEREKTTLILYQVTRGGLLDIDV--RIFDPRGNTIFSKLHFDT--TMKGRQSFVAAESGAYKLCFNNE----------MSRFTAKVVSFSWTVEDSNNNDIAKGDSLTPMDQSIQKIERTLQSI----IHEQKRLRYREQANRDTSESTNGRVVWWSIAEVVVLVVMGVAQIWYLRRWFDSRSS 204          
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Match: D3BM15_POLPP (Emp24/gp25L/p24 family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BM15_POLPP)

HSP 1 Score: 52.8 bits (125), Expect = 6.610e-5
Identity = 57/218 (26.15%), Postives = 101/218 (46.33%), Query Frame = 0
Query:    4 MLLVTLFFSAGVAVNSIPATVLVEPRETVCFSKFAKEETRFSLDVFVFQGDGIGVTVHYRHGGEKPKNIFSAKIFSTGDNLQDGHKFEAKHPGEYEICLANDHRFEQGTKHVMLNITEKTEDAARGPSEPTNGQTKESKDKTEIGNRLETLKEKFDEMRKRQMEERKSLAFREAA----AEGNHKSMVRSSIMETVVLLLVSVGQIFFVRRWFQGKGT 217
            +LL  +   A V VN++  T+ +EP+   CF ++ +      +   V +G  + + V  R    +   IFS   F T   ++    F A   G Y++C  N+    + T  V+   T   EDA              S  K +  + +E   +K + + +  + E+K + FRE      +E  +  +VR +I++ +VL+ + VGQI+++RRWF  K T
Sbjct:    6 LLLAVVLCLAVVNVNAL--TMQIEPKTQECFYEYVENGKTSIILYQVIRGGLLDIDV--RIYDPQGNTIFSRLHFDT--TMKGRQSFTAATSGAYKLCFNNE--MSRFTAKVVT-FTWSFEDADN------------SFVKGDALSPMEQSVQKIERVLQSIVMEQKRMRFREQTNRDTSENTNARVVRWTIIQVLVLVSMGVGQIWYLRRWFDSKST 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3979.10316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FKV3_ECTSI2.170e-4041.03GOLD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2V1P8_9STRA5.120e-1232.35Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D7I6_9STRA1.540e-652.83GOLD domain-containing protein n=2 Tax=Monodopsida... [more]
TMEDB_DICDI5.640e-625.35Transmembrane emp24 domain-containing protein B n=... [more]
A0A5E4MEG2_9HEMI1.140e-529.11GOLD domain n=1 Tax=Cinara cedri TaxID=506608 RepI... [more]
A0A8J4Q2E2_9MYCE4.940e-524.12GOLD domain-containing protein n=1 Tax=Polysphondy... [more]
D3BM15_POLPP6.610e-526.15Emp24/gp25L/p24 family protein n=1 Tax=Polysphondy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..171
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..212
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.804
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 21..213
e-value: 2.2E-19
score: 80.4
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 23..213
e-value: 3.2E-22
score: 79.4
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 31..121
score: 9.46
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 4..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3979contigH-paniculata_contig3979:2259..9192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3979.10316.1mRNA_H-paniculata_contig3979.10316.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3979 1351..10050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3979.10316.1 ID=prot_H-paniculata_contig3979.10316.1|Name=mRNA_H-paniculata_contig3979.10316.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MMAMLLVTLFFSAGVAVNSIPATVLVEPRETVCFSKFAKEETRFSLDVFV
FQGDGIGVTVHYRHGGEKPKNIFSAKIFSTGDNLQDGHKFEAKHPGEYEI
CLANDHRFEQGTKHVMLNITEKTEDAARGPSEPTNGQTKESKDKTEIGNR
LETLKEKFDEMRKRQMEERKSLAFREAAAEGNHKSMVRSSIMETVVLLLV
SVGQIFFVRRWFQGKGTLLKQWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720TMP21-related