prot_H-paniculata_contig39707.10302.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39707.10302.1
Unique Nameprot_H-paniculata_contig39707.10302.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A4Z0A825_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A825_9AGAM)

HSP 1 Score: 129 bits (323), Expect = 4.480e-31
Identity = 88/238 (36.97%), Postives = 129/238 (54.20%), Query Frame = 0
Query:   16 GTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCA---ACVKASVLSD-------IGTGVQESSRGRSSNLSEY--------RSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            GTW+   L   P       +KW+FK K    G++ ++KARLVAQGFSQ+   DF +T APVA +S++R +  LAA  ++E+  MDV  AYLN  ++EE+++K PP FP +P   H  A     +    L D       +    Q ++    S L +Y        R   GSLMYA+  TR DIAYAV  +++ M++P R  +   KC+ RYL    +  +T+ G +   G+ G+ DAD
Sbjct:  112 GTWK---LVEKPDRVNIVGSKWVFKIKRDAAGTIIKYKARLVAQGFSQIPGVDFTDTFAPVAKLSSIRILAVLAAHFNWELHQMDVKNAYLNGDLDEEIYMKQPPGFP-APGQEHKRAYIDTILARFNLEDSKPLDTALDPSFQLTTAQSPSTLQQYEEMRNVPYREAIGSLMYAALGTRPDIAYAVTTLSQFMQNPGRMHWEGAKCVLRYLKATKEEWLTYRGDAK-TGIMGYSDAD 344          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: UPI000900E69D (uncharacterized protein LOC109184713 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900E69D)

HSP 1 Score: 121 bits (304), Expect = 3.780e-30
Identity = 77/231 (33.33%), Postives = 128/231 (55.41%), Query Frame = 0
Query:    9 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEG-MDVDAAYLNAPVEEELFVKLPPSFPL---SPEIRHLCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            ++AL DN TW    L  LP G+     KW++K KLK DGS+ R+KARLVA+G+++    D+LET +PVA M+T+R+  ++A  + + +   +D++ A+L+  +EE++++ LPP F     + ++ H     +K                    ++S YR L G L+Y +T TR DI +AV QV++ ++ P  +  +    + RYL   P  GI++   S    L+ F D+D
Sbjct:    5 IQALQDNNTWV---LTELPPGKNPIGCKWVYKVKLKADGSIERYKARLVAKGYTKQLGVDYLETLSPVARMTTIRTFLAIAMIKGWHVHHQLDINNAFLHGDLEEDVYMTLPPGFQSDKPNQQLTHNDDVLLK--------------------DVSFYRRLVGRLLYLTT-TRPDIGFAVQQVSQFIDAPTEKHMAAAHRVLRYLKAAPGKGISYSSNSALQ-LQVFSDSD 210          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: UPI00092EC05F (uncharacterized protein LOC109329869 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092EC05F)

HSP 1 Score: 122 bits (307), Expect = 4.060e-30
Identity = 81/245 (33.06%), Postives = 132/245 (53.88%), Query Frame = 0
Query:    9 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCAACVKASVLSD--IGTGVQESS-------RGRSSNLSE---------YRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            ++AL DN TW    +  LP  ++   +KW++K K K DG++ RHKARLVA+GF+Q+E  DF +T APV  ++T+R +  +A+ +++ +E +DV+ A+L++ + EE+++ LP     +    H  ++     +  D  I  G   S        +G+S +  +         YR L G L+Y  T TR DI +AV Q+++ M  P    +     I RYL   P  G+ +   S+ H L GF D+D
Sbjct:    5 LQALQDNNTWT---IVSLPPNKRPIGSKWVYKLKFKVDGTIERHKARLVAKGFNQIEGLDFFDTFAPVVKLTTIRILLVVASSQNWILEQLDVNNAFLHSGLNEEVYMTLPQGVTSTIPNPHNDSSFTALVIYVDDLILAGFLHSKPVQTPMIKGQSIHQDDSPPFQDPMLYRQLVGRLLYL-TNTRPDITFAVQQLSQFMTAPTSLHYKALTRILRYLKASPGKGLLYSSSSSLH-LTGFSDSD 244          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A438HFN7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HFN7_VITVI)

HSP 1 Score: 127 bits (319), Expect = 6.840e-30
Identity = 81/243 (33.33%), Postives = 125/243 (51.44%), Query Frame = 0
Query:    9 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCAA----------------CVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            M+AL  N TWE  DL   P  +K    KW+F  K K DGS+ RHKARLVA+G++Q    D+ ET   VA M+T+R + S+AA+  + ++ +DV  A+L+  +EE++F++LPP   ++   + +  +                C       D+   +     G+  +   Y+ L G L+Y S  TR DIA+AV  V++ M +P  +       I RYL   P+ G+ F  +     +E F DAD
Sbjct:  857 MKALFKNHTWEVIDL---PIRKKPVGRKWLFTVKFKADGSMERHKARLVAKGYTQTFGIDYQETFVLVAKMNTMRVLLSIAAKMDWALQQLDVKNAFLHGDLEEKMFMELPPGIEVARSRKRIVLSQRKYVLDLLKKTGMLGCKPIDTPIDVNIKMSTHIGGKEVDREGYQRLVGKLIYLS-HTRPDIAFAVSLVSQFMHNPKEDHLQAIFRILRYLKGSPERGLLFSKQDKSLDVEAFTDAD 1095          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A6L2NYR2_TANCI (Retrotransposon protein, putative, Ty1-copia subclass (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NYR2_TANCI)

HSP 1 Score: 125 bits (313), Expect = 4.130e-29
Identity = 76/224 (33.93%), Postives = 118/224 (52.68%), Query Frame = 0
Query:   11 ALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDA 234
            ++ +N TW    L  LP G K    KWIFK+K+K DG++ + KARLV QGF Q E  D+ +T APV+ M+T+R + +L A  +  I  MDV  A+LN  ++EE+++K P    +  +   +C          + G  V +          EY    G LMYA T T  DIAYAV +++R   +P R+ +     +F+Y+      G+++    +   L+G+ DA
Sbjct:  802 SIMENNTWV---LSNLPLGCKPLGCKWIFKKKMKVDGTINKFKARLVIQGFRQKEGIDYFDTYAPVSRMTTIRLLLALVATHNLVIHQMDVKIAFLNGDLDEEVYMKQPKRCVMPGDNHKVCKLVKSLKARPNTGKPVDQL---------EYSRTIGCLMYAMTNTGPDIAYAVGRLSRFTSNPSRQHWQAITRVFKYIKGTMSYGLSYVEYPSV--LKGYSDA 1011          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A2N9G413_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G413_FAGSY)

HSP 1 Score: 123 bits (309), Expect = 1.350e-28
Identity = 90/237 (37.97%), Postives = 137/237 (57.81%), Query Frame = 0
Query:    9 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPP--SFPLSPEIRHLCAACV--KASVLSDIGTGVQES---SRGRSSNLSE---YRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            M AL  N TW   D+  LP  +    +KW++  KLK DGS+ R+KARLVAQGFSQ    D+ ET APVA M+T+R++ +++A R ++I  MDV  A+LN  + E ++++ PP  S+ LS     +  + +  K S  S + T ++ +   S+     +++   YR + GSL+Y  T TR DIA+AV  V++ + DP R   +    I RYL +  DLG+ +  KS    L+ + DAD
Sbjct:  472 MDALEANETW---DIVPLPTNQPVVGSKWVYSVKLKSDGSLDRYKARLVAQGFSQEYGIDYDETFAPVAKMTTVRTLIAISAIRDWDIFQMDVKNAFLNGDLSETVYMRPPPGSSYCLSSYGLQITQSTIWPKTSTSSVVDTPLEVNVKYSKNDGEPITDPTLYRRVVGSLVYL-TVTRPDIAHAVQLVSQFVSDPRRLHLTALHRIIRYLRSTSDLGLPYY-KSALPQLQAYSDAD 703          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: UPI001246877E (uncharacterized protein LOC115967312 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001246877E)

HSP 1 Score: 117 bits (293), Expect = 1.450e-28
Identity = 79/212 (37.26%), Postives = 120/212 (56.60%), Query Frame = 0
Query:   27 PAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSF--PLSPE-IRHLCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            P G     TKWIF+ K  E+G+V  +KARLVAQG+SQ+E  D+ ET A VA M ++R + +LA +  F+   MDV  A+LN  ++E+++V+ P  F  P  P+ +       VKAS  S I    ++   GR+ + S YRS+ GSL+Y  T +R DI+Y++   AR+  +P     +  K I +Y+ T  + G+ +  K     L  + DAD
Sbjct:   20 PEGEHIIGTKWIFRNKTDEEGNVIWNKARLVAQGYSQMEGVDYDETFALVARMESIRILLALACQLKFKFYQMDVKTAFLNGFLKEDIYVEQPKGFIDPHFPDHVPQESTLWVKASPQSLI----RQKDSGRNVDPSLYRSMIGSLLYL-TASRPDISYSIGVCARYQANPKESHMTALKRIIKYVKTTAEFGVWYS-KDTSDVLARYSDAD 225          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A5BVG4_VITVI (Reverse transcriptase domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BVG4_VITVI)

HSP 1 Score: 122 bits (306), Expect = 3.730e-28
Identity = 79/243 (32.51%), Postives = 123/243 (50.62%), Query Frame = 0
Query:    9 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCAA----------------CVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            M+AL  N TWE  DL   P  +K    KW+F  K K DGS+ RHKARLVA+G++Q    D+ ET   VA M+T+R + S+AA+  + ++ +DV  A+L+  +E ++F++LPP   ++   + +  +                C       D+   +     G+  +   Y+ L G L+Y S  TR DIA+AV  V++ M +P  +       I RY    P+ G+ F  +     +E F DAD
Sbjct:  121 MKALFKNHTWEVIDL---PIRKKPVGRKWLFTVKFKADGSMERHKARLVAKGYTQTFGIDYQETFVLVAKMNTMRVLLSIAAKMDWALQQLDVKNAFLHGDLEXKMFMELPPGIEVARSRKRIVLSQRKYVLDLLKKTGMLGCKPIDTPIDVNIKMSTHIGGKEVDREGYQRLVGKLIYLS-HTRPDIAFAVSLVSQFMHNPKEDHLQAIFRILRYPKGSPERGLLFSKQDKSLDVEAFTDAD 359          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A699HIR0_TANCI (Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HIR0_TANCI)

HSP 1 Score: 120 bits (301), Expect = 1.340e-27
Identity = 79/225 (35.11%), Postives = 118/225 (52.44%), Query Frame = 0
Query:   11 ALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHG-LEGFVDA 234
            ++ +N TW   DL   P+G +    KWIFKRK+K +GS  + KARLV QGF Q E  D+ +T A VA ++T+R + SL A  +  I  MDV+ A+LN  ++EE+++K P  F +       C        L  +     +       +  EY  + G LMYA T TR  IAY V +++R   +  R+ +     IF+YL    + G+++ G    H  LEG+ DA
Sbjct:  372 SIMENNTWVLSDL---PSGCEPLGYKWIFKRKMKVNGSGDKFKARLVIQGFRQKEGIDYFDTYALVARITTIRLLLSLVAIHNLVIHQMDVNTAFLNGDLDEEVYMKQPEGFIMPGNENKACKLVKSLYRLKQVPKQWHQKFDEEPVDQLEYSRVIGYLMYAMTSTRPSIAYDVGRLSRFTSNHSRQHYKAITRIFKYLRGTKNYGLSYVGY---HAVLEGYSDA 590          
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A4Y1S0R7_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1S0R7_PRUDU)

HSP 1 Score: 117 bits (294), Expect = 5.220e-27
Identity = 81/218 (37.16%), Postives = 120/218 (55.05%), Query Frame = 0
Query:   35 TKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEI--RHLCAACVKAS-VLSDIG--------------TGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD 235
            TKWIF+ K  E G + R+KARLVAQG++Q+E  DF ET APVA + ++R + S+A    F++  MDV +A+LN  ++EE++V+ P      P I  RH+  +   A+ ++S  G              T + + S G+S +   YRS+ GSL+Y  T +R DI+++V   AR   DP        K I RY+S     G+ +   SN   L G+ DAD
Sbjct:  150 TKWIFRNKTDEKGQIMRNKARLVAQGYTQIEGLDFDETFAPVARLESVRLLLSIACYLRFKLYQMDVKSAFLNGVLQEEVYVEQP----AGPTIQWRHVHISTKYANNLVSKFGLESAKPIRNPMSTSTKLSKDSSGKSVDQKLYRSMIGSLLYL-TASRPDISFSVGLCARFQSDPKESHLLAVKRILRYVSGTTTFGVYYSFDSNVE-LAGYSDAD 361          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Z0A825_9AGAM4.480e-3136.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000900E69D3.780e-3033.33uncharacterized protein LOC109184713 n=1 Tax=Ipomo... [more]
UPI00092EC05F4.060e-3033.06uncharacterized protein LOC109329869 n=1 Tax=Lupin... [more]
A0A438HFN7_VITVI6.840e-3033.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A6L2NYR2_TANCI4.130e-2933.93Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A2N9G413_FAGSY1.350e-2837.97Integrase catalytic domain-containing protein n=1 ... [more]
UPI001246877E1.450e-2837.26uncharacterized protein LOC115967312 n=1 Tax=Querc... [more]
A5BVG4_VITVI3.730e-2832.51Reverse transcriptase domain-containing protein n=... [more]
A0A699HIR0_TANCI1.340e-2735.11Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetu... [more]
A0A4Y1S0R7_PRUDU5.220e-2737.16Transposable element protein n=1 Tax=Prunus dulcis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 22..124
e-value: 2.2E-27
score: 96.3
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 9..122
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39707contigH-paniculata_contig39707:13..1163 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39707.10302.1mRNA_H-paniculata_contig39707.10302.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39707 1..1583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39707.10302.1 ID=prot_H-paniculata_contig39707.10302.1|Name=mRNA_H-paniculata_contig39707.10302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MARGNGGRMRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVA
RHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMD
VDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCAACVKASVLSDIGTGVQE
SSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFS
ICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like