mRNA_H-paniculata_contig39707.10302.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A2N9EI16_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EI16_FAGSY) HSP 1 Score: 230 bits (586), Expect = 5.020e-64 Identity = 146/400 (36.50%), Postives = 211/400 (52.75%), Query Frame = 1
Query: 43 ALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFP-----------------LSPE-------------------------IRH-----LCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTK 1101
++ N TWE DL P GR+ KWI+K K EDGS+ +HKARLVA+G++Q DF ET APV M T+R+V +LAA+ ++ +DV +A+LN +EEE++V+ P + L+P ++H AC S +Q++ ++ YRSL GSL+Y T TR DI ++V ++R M P + ++ K I RYL LGI + K N + L GF D+D ++DRKST+GY+F L I+ S+KQ+ V SS EAEY+AA +A V+LR++L + T + DN SAI ++K H RTKHI +R H IR+ + +G + LK + T+DQ ADILTK
Sbjct: 592 SIERNQTWELVDL---PNGREVIGLKWIYKTKFNEDGSIQKHKARLVAKGYAQQPGVDFHETFAPVVRMETIRTVLALAAQMELQVFQLDVKSAFLNGDLEEEVYVEQPKGYVKKGKEDRVYRLRKALYGLAPRAWNSKIDSYFRQNGFHRSKCEPSLYVKHDGTGRFSGACKPVSTPMSSNEKLQQNDAAEKADAKAYRSLVGSLIYL-TNTRPDIVHSVSLISRFMNQPSKLHYATAKRILRYLQGTKKLGILYK-KENDNNLVGFTDSDWVGSLDDRKSTSGYIFCLGSKVIAWSSKKQKTVALSSAEAEYIAANDAACEAVWLRKILSDLQQKIEEPTVICCDNMSAIAMTKNPVFHARTKHIELRHHFIRDLVSQGEIQLKFISTNDQPADILTK 986
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A2Z6N7S3_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N7S3_TRISU) HSP 1 Score: 228 bits (581), Expect = 5.220e-63 Identity = 139/378 (36.77%), Postives = 213/378 (56.35%), Query Frame = 1
Query: 43 ALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPE------------IRHLCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSRVQFLRLRNL 1140
A+ N TWE L LP+G K KWI+K K E G + +HKARLVA+G++Q D+ E APVA T+R++ +LAAER + + +DV +A+L+ +EEE++V+ P + + ++ ACV ++ G +++ G+ + Y+ + GSLMY TR D+ ++V VAR ME P + K I RYL G+ + K G L G+ D+D A D++D+KST+GYVF + A+S SRKQ +VT S+T+AE++AA ++L ++ I + T+F DN S+I +SK H R+KHI VR+H +R+ ++G + L H + +Q ADI+TK LS F R+R L
Sbjct: 792 AIESNDTWE---LAELPSGAKKIGVKWIYKTKYNEQGKIEKHKARLVAKGYAQQHGIDYNEIFAPVARWDTIRTILALAAERGWYVFQLDVKSAFLHGDLEEEVYVEQPLGYQKENKNLVYRLKKSLYGLKQAPRACVCNPMVP--GNKLKKDEAGKMCYSTNYKQMVGSLMYLLA-TRPDMTFSVCLVARFMERPTEIHVAAVKRILRYLKGTLSYGLWYE-KGRGEELIGWSDSDYAGDLDDKKSTSGYVFMIGSKAVSWSSRKQPIVTLSTTKAEFIAAASNACQGIWLSRIIAHIDVDKKKGITIFCDNTSSIKLSKNPVLHGRSKHIDVRFHFLRDLTKDGVIKLVHCSSFEQTADIMTKALSLDNFCRIRGL 1162
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 214 bits (544), Expect = 1.120e-60 Identity = 158/497 (31.79%), Postives = 233/497 (46.88%), Query Frame = 1
Query: 31 GRMRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPE---------------------IRHLCAA--------------------------CVKASV-------------------------LSDIGT-------GVQESSRGRSSNLSE------------------------------------------------YRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSRVQFLRLRNL 1140
GRM+ + GTWE L P G + W+FK K G++A++KARLVAQGFSQ+ D+ +T APVA +S++R + +LAA +E+ MDV AYLN +EEE+F+K PP FP + + LCAA V SV ++D+G ++ RGR+ ++ + YR GSLMYA+ TR D++YAV +++ M++P + K + RYL + +T+GG N +G+EGF DAD + R+S +GYVF ++GGA+S S+KQ +V SSTEAEYVA A K ++ R LG I TTL+ DN+SAI ++K + H RTKHI +R+H IR+ + G + + + T+D AD+LTK L+R + ++R L
Sbjct: 54 GRMKKM---GTWE---LAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEKMRGL 542
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A4Z0A825_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A825_9AGAM) HSP 1 Score: 211 bits (537), Expect = 3.390e-60 Identity = 142/379 (37.47%), Postives = 209/379 (55.15%), Query Frame = 1
Query: 58 GTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCA---ACVKASVLSD-------IGTGVQESSRGRSSNLSEY--------RSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSRVQFLRLRNL 1140
GTW+ L P +KW+FK K G++ ++KARLVAQGFSQ+ DF +T APVA +S++R + LAA ++E+ MDV AYLN ++EE+++K PP FP +P H A + L D + Q ++ S L +Y R GSLMYA+ TR DIAYAV +++ M++P R + KC+ RYL + +T+ G + G+ G+ DAD + R +GYVF ++ GA+S S+KQ +V STEAEYVA A K V++R LG + T L DN+SA+ ++K + H RTKHI +R+H IR I + L + T++ AD+LTK L+ + ++R L
Sbjct: 112 GTWK---LVEKPDRVNIVGSKWVFKIKRDAAGTIIKYKARLVAQGFSQIPGVDFTDTFAPVAKLSSIRILAVLAAHFNWELHQMDVKNAYLNGDLDEEIYMKQPPGFP-APGQEHKRAYIDTILARFNLEDSKPLDTALDPSFQLTTAQSPSTLQQYEEMRNVPYREAIGSLMYAALGTRPDIAYAVTTLSQFMQNPGRMHWEGAKCVLRYLKATKEEWLTYRGDAKT-GIMGYSDADWGSS-DHRHFISGYVFLVDSGAVSWSSKKQPIVALLSTEAEYVAMTHAAKEAVWMRAFLGEMLTPFDMPTLLHCDNQSAMTLAKDNIFHSRTKHIAIRYHFIRNIIEHDEIDLVYCPTAEMAADVLTKALTCPKMEKMRGL 484
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A5E8BJR9_9ASCO (Integrase catalytic domain-containing protein n=2 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BJR9_9ASCO) HSP 1 Score: 218 bits (556), Expect = 1.410e-59 Identity = 155/460 (33.70%), Postives = 223/460 (48.48%), Query Frame = 1
Query: 37 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLC---------------------AACVK------------------------ASVLSDIGT-------------------------------GVQESSRGRS-------SNLSE---------YRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSRVQFLRLRNL 1140
M +L NGTWE DL P GRKA +KW+FK K K DGS+ R+KARLV GFSQVE D+ ET APV T+R V ++AA+ F++ MDV+ A+LN ++E+++++ P F + + +C A VK A + D+G G+Q S ++ S+ SE YRS+ G L+YA+ R D+A AV + R+M+ P K RYL +LG+ + + + L G+ DAD A+D +DRKS TGYVF L+GG I+ RKQ SS E+EY++ +A K ++ +LL T+FEDN+ I +++ H RTKHI VR+H +R +IR G + L+++ T LAD+ TK L RV+F LR L
Sbjct: 784 MSSLKRNGTWELVDL---PPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKVCHLKKSLYGLKQAPLCWNEKIHGALVKLGFIRNESDYGVYTKGSGSTMVIIALYMKDLGPVEQFLGMRVKQSPYHITVDVSRYIFDVLEEFGMQNCSSVKTPLPTRDLSDFSESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQSPKSIHMEAAKHTLRYLKGTAELGLEYRAQKV-YKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGL 1239
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A2N9I807_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I807_FAGSY) HSP 1 Score: 218 bits (556), Expect = 1.480e-59 Identity = 150/410 (36.59%), Postives = 221/410 (53.90%), Query Frame = 1
Query: 43 ALADNGTWESQDLGRLPAGRKATRTKWIFKRK-LKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPL-------------------SPE--IRHLCAACVKASVLSDIGTG-------------------VQESSRGRSS------------NLSE--YRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGL 1107
+L+ N TWE L LP G+K KW+FK+K + R KARLVA+G+SQ D+ E +PV +++R+V +L A++ E+E +DV A+L+ +EEE+F++ P F SP + L + K + D+G +++++ GR S N+S+ Y S G LMYA TR D+A+AV V+R+M +P RE ++ K IFRYL + GI F + + + G+VDAD A +V+DR+STTGYVF L+GG I S Q +V S+TEAEY+A EA K ++L+ L+ +G +G + D++SAI ++K H RTKHI VR+H IRE I G + L+ V TS+ AD+LTK L
Sbjct: 762 SLSKNKTWE---LTELPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIHRDRGQESYGCLRKTTSGRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPL 1167
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A438H6F6_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H6F6_VITVI) HSP 1 Score: 209 bits (532), Expect = 1.840e-59 Identity = 136/369 (36.86%), Postives = 209/369 (56.64%), Query Frame = 1
Query: 103 KATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSF---------------------PLSPEI--RHLCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSRVQFLRLRNL 1140
K+ KW++K KL +DG V ++KARLVA+G+ Q D+ E APVA + T+R V S+AA+ + I +DV +A+L+ +EEE+++ PP + + EI + + C S++G + +S G+ + + Y+ + GSLMY T TR DI +AV+ ++R+ME+P + V D FG K N E +D A D++DRKST+G VF LN GAI+ S+KQQ+VT S+TEAE+VAA + ++LR LL + +G T ++ DN SAI +SK H R+KHI VR+H +R+ ++G + L ++ DQ+ADILTK L F++LR++
Sbjct: 127 KSIGVKWVYKTKLNKDGGVDKYKARLVAKGYKQEFGVDYKEVFAPVAKLDTIRLVLSMAAQNSWSIHQLDVKSAFLHGELEEEVYIDQPPGYVKQGYENQVVQSSAGVFISQNKYALEILDKFMLKDCNSIITPSEVGLKLSKSGAGKMVDSTLYKQIVGSLMYL-TSTRPDIMHAVNLISRYMENP---------------TEVSD----FGCKKNFSLFE----SDYAGDLDDRKSTSGAVFMLNYGAIAWSSKKQQIVTLSTTEAEFVAAASSSCQAIWLRRLLEVLYNQQQGPTVIYCDNLSAIKLSKNLVLHGRSKHIAVRYHFLRDLCKDGVIDLVFCKSEDQIADILTKPLKPAVFMKLRSM 471
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A0J7KHD5_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KHD5_LASNI) HSP 1 Score: 217 bits (552), Expect = 2.340e-59 Identity = 143/417 (34.29%), Postives = 214/417 (51.32%), Query Frame = 1
Query: 37 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEI-------------------------------------------RHLCAACVKASVLSDIGTGVQESSRGRSSNLSE------------YRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSRVQF 1122
+ +L NGTW DL P GR+A KW+FK K G + R+KARLVA+G++Q + D+ ET +PV ++R++ ++AA++ EI DV A+L ++EE+++ +P P + ++ +L K + G SR S SE +R GSLM+A+ +R DI +AV V+R++E+P E + K I RY GI + G N GL + D+D A D + R+ST+GYV L GGA+S S++Q++V S+TEAEYVAA +A K +++R LL S+G +G + DN+ +I + K H RTKHI VR+H IRE + G + +K+V +S QLADILTK L + F
Sbjct: 511 LASLMKNGTWCEADL---PPGRQAISAKWVFKLKRGPSGEIVRYKARLVARGYAQRPNVDYTETYSPVVRYESVRALLAIAAQQDMEIAQGDVKTAFLYGTLDEEIYMTVPDGAPNAGQVTAVDKVMDYLMTEFEVTIGSTEYFIGLEIKRDCIVRTIKISQRNYLLRVAEKIGLADAKGISTPAESRVYLSTTSEDNNDKRDMEKVPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGLEHWQAVKRIIRYAKETAAYGIVYDGH-NTDGLIIYSDSDYATDPDTRRSTSGYVTVLAGGAVSWMSQRQRIVALSTTEAEYVAASDATKEAIWIRRLLESVGVNKKGPIEMRLDNQGSIKLIKNPEFHKRTKHIDVRFHYIREIYKNGQIDIKYVPSSKQLADILTKALPKSTF 923
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A4C1T256_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1T256_EUMVA) HSP 1 Score: 217 bits (552), Expect = 4.060e-59 Identity = 140/378 (37.04%), Postives = 204/378 (53.97%), Query Frame = 1
Query: 1 EGEKMARGNGGRMRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEI--RHLCAACVKASVLSDIGTGVQ--ESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTT---LFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSR 1113
E EK + +L N TW DL P G+K KW+FKRK G + R+KARLV +G+ Q + D+ E APV +++R + +AA+ + EI MD A+L V+E++++ PP+F +I R C D T ++ ES N+ Y+ G L+Y S TR DI Y V+ ++R+ P E ++ K +FRYL D +T+ G S G+ + G+ DAD A EDR+S TGYVF L G AIS CS+KQ + SSTEAEY + A + ++ ++L + + ++ DN+SAI I H R+KHIGVR+H IRE I + + +K+ ++ D ADILTKGL R
Sbjct: 753 ESEKWKQAMKEEYESLIHNNTWSLVDL---PGGKKGIPCKWVFKRKFDHTGKITRYKARLVIKGYKQKKGIDYNEIYAPVVRYTSIRYLIDIAAKYNLEIHQMDAITAFLQGDVDEDIYMSQPPTFDREEKILTRFGMDDCKPVWTPCDPNTQLKRAESEEEILRNV-PYQEAIGCLLYLSQGTRPDITYIVNSLSRYNGQPTAEHWTTLKRVFRYLKATIDYKLTYHGNSEGN-ITGYCDADWASHSEDRRSCTGYVFILQGAAISWCSKKQLTIALSSTEAEYTSLATAVQEAIWQKQL--DEDYWPESSAVPIVVYCDNQSAIRILDSESYHQRSKHIGVRYHFIRERIADKQVLVKYQRSQDMTADILTKGLHR 1123
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Match: A0A2P6UYX8_9CHLO (Retrotransposon Ty1-copia subclass n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYX8_9CHLO) HSP 1 Score: 207 bits (526), Expect = 4.710e-59 Identity = 130/362 (35.91%), Postives = 184/362 (50.83%), Query Frame = 1
Query: 37 MRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVARHKARLVAQGFSQVESEDFLETSAPVACMSTLRSVFSLAAERHFEIEGMDVDAAYLNAPVEEELFVKLPPSFPLSPEIRHLCAACVKASVLSDIGTGVQESSRGRSSNLSEYRSLAGSLMYASTRTRADIAYAVHQVARHMEDPCREDFSICKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDAD*AEDVEDRKSTTGYVFKLNGGAISSCSRKQQLVTWSSTEAEYVAAGEAGKGRVYLRELLGSIGFGCRGNTTLFEDNKSAINISKGSGAHCRTKHIGVRWHGIREWIREGTLALKHVQTSDQLADILTKGLSRVQF 1122
M +L N TW L P G K KW++K K +G++ R+KARLV QGF Q E D+ E APV+ STLR+V S A + ++ +D+ A+LN ++EE++ Y +L GSLMY S TR DIA AV +ARHM +P + ++ K + RYL+ PD+GITFG S G L+ F DAD A D++ R+STTGY F NGGAIS SR Q V S+TEAEY+AA K ++LR+L + + D+++A+ + K R+KHI V H RE + + +++ T +AD LTK + +F
Sbjct: 77 MASLIANDTWT---LCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAGRQDLDLHQLDIKTAFLNGTIDEEVYTH-------------------------------------------SYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWLRKLFQDLSLDLH-TVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVPATKF 389 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39707.10302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39707.10302.1 >prot_H-paniculata_contig39707.10302.1 ID=prot_H-paniculata_contig39707.10302.1|Name=mRNA_H-paniculata_contig39707.10302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp MARGNGGRMRALADNGTWESQDLGRLPAGRKATRTKWIFKRKLKEDGSVAback to top mRNA from alignment at H-paniculata_contig39707:1..1583+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39707.10302.1 ID=mRNA_H-paniculata_contig39707.10302.1|Name=mRNA_H-paniculata_contig39707.10302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1583bp|location=Sequence derived from alignment at H-paniculata_contig39707:1..1583+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39707:1..1583+ >mRNA_H-paniculata_contig39707.10302.1 ID=mRNA_H-paniculata_contig39707.10302.1|Name=mRNA_H-paniculata_contig39707.10302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at H-paniculata_contig39707:1..1583+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |