prot_H-paniculata_contig39625.10287.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39625.10287.1
Unique Nameprot_H-paniculata_contig39625.10287.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
BLAST of mRNA_H-paniculata_contig39625.10287.1 vs. uniprot
Match: A0A485L7G2_9STRA (Aste57867_16617 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7G2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.270e-8
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0
Query:    2 WICDSGATGHATPSAAHMSSYWQVKETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVL--NVA-----HAPELHYNLFSLR 77
            WI DSGAT   TP+    S Y   K++LR+A G+++ ++G G L + F  S  + P  V   NV      H P+L +NL S+ 
Sbjct:  365 WIIDSGATASTTPTRTFFSKYVPCKQSLRVADGKMLAVIGYGELCLRFNLSEPDPPAQVRKGNVLFTFGLHCPDLKFNLLSVH 447          
BLAST of mRNA_H-paniculata_contig39625.10287.1 vs. uniprot
Match: A0A445M2Q0_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445M2Q0_GLYSO)

HSP 1 Score: 54.7 bits (130), Expect = 2.000e-6
Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    1 SWICDSGATGHATPSAAHMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVADAGN 84
            SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++++  +TS+G++  ++ NV H P L  NL S+ ++ D G+
Sbjct:  266 SWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDDEGH 347          
BLAST of mRNA_H-paniculata_contig39625.10287.1 vs. uniprot
Match: A0A445M280_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445M280_GLYSO)

HSP 1 Score: 54.7 bits (130), Expect = 2.030e-6
Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    1 SWICDSGATGHATPSAAHMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVADAGN 84
            SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++++  +TS+G++  ++ NV H P L  NL S+ ++ D G+
Sbjct: 1162 SWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDDEGH 1243          
BLAST of mRNA_H-paniculata_contig39625.10287.1 vs. uniprot
Match: A0A151QVU7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QVU7_CAJCA)

HSP 1 Score: 52.4 bits (124), Expect = 1.210e-5
Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 SWICDSGATGHATPSAAHMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVADAGNK 85
            SWI DSGA+ H TPS   +++Y   +   + +A G+ + IVG+G++++  RTS+G+   ++ NV H P L  NL S+ ++ D G++
Sbjct:  289 SWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLNIVGKGDIAI--RTSSGS-HWTLKNVRHIPALKRNLISVGQLDDEGHE 371          
BLAST of mRNA_H-paniculata_contig39625.10287.1 vs. uniprot
Match: A0A151TNK0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TNK0_CAJCA)

HSP 1 Score: 52.4 bits (124), Expect = 1.300e-5
Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 SWICDSGATGHATPSAAHMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVADAGNK 85
            SWI DSGA+ H TPS   +++Y   +   + +A G+ + IVG+G++++  RTS+G+   ++ NV H P L  NL S+ ++ D G++
Sbjct:  267 SWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLNIVGKGDIAI--RTSSGS-HWTLKNVRHIPALKRNLISVGQLDDEGHE 349          
BLAST of mRNA_H-paniculata_contig39625.10287.1 vs. uniprot
Match: H3H469_PHYRM (Retrotran_gag_3 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H469_PHYRM)

HSP 1 Score: 50.1 bits (118), Expect = 7.910e-5
Identity = 28/86 (32.56%), Postives = 46/86 (53.49%), Query Frame = 0
Query:    2 WICDSGATGHATPSAAHMSSYWQV-KETLRIASGQVIPIVGRGNLSMTFRTSNGNVPL-SVLNVAHAPELHYNLFSLRKVADAGNK 85
            W  DSG T + T S         +  +T+ +     IPI+G+G ++MT   + G+  + S+ +V +APEL +NL S+R+  D   K
Sbjct:  381 WTIDSGCTRYVTSSPHWFEDLKPIIGKTITVGGNHQIPILGKGTVNMTVTDTKGSKRIISLSDVLYAPELKFNLLSVRQAVDGDYK 466          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39625.10287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A485L7G2_9STRA8.270e-837.35Aste57867_16617 protein n=1 Tax=Aphanomyces stella... [more]
A0A445M2Q0_GLYSO2.000e-638.82Retrovirus-related Pol polyprotein from transposon... [more]
A0A445M280_GLYSO2.030e-638.82Retrovirus-related Pol polyprotein from transposon... [more]
A0A151QVU7_CAJCA1.210e-537.21Retrovirus-related Pol polyprotein from transposon... [more]
A0A151TNK0_CAJCA1.300e-537.21Retrovirus-related Pol polyprotein from transposon... [more]
H3H469_PHYRM7.910e-532.56Retrotran_gag_3 domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39625contigH-paniculata_contig39625:864..1172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39625.10287.1mRNA_H-paniculata_contig39625.10287.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39625 864..1172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39625.10287.1 ID=prot_H-paniculata_contig39625.10287.1|Name=mRNA_H-paniculata_contig39625.10287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
SWICDSGATGHATPSAAHMSSYWQVKETLRIASGQVIPIVGRGNLSMTFR
TSNGNVPLSVLNVAHAPELHYNLFSLRKVADAGNKYVGDCDGIIVYPKTG
GVL
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