mRNA_H-paniculata_contig3939.10238.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3939.10238.1
Unique NamemRNA_H-paniculata_contig3939.10238.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 3.650e-93
Identity = 253/411 (61.56%), Postives = 268/411 (65.21%), Query Frame = 1 
Query:  409 MPPVDDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRTG-----VPHGAGSPGFAGPEAGGGGSFAEAGSPGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSQGSPYGMPPQMQMAGMAMGYSPYVHLAAAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAS------------------------------GSVPIHTYGQFGMYAGYPGMMGLPYPFQAHGYPGMPGYGVPGMGAYPSL--GGGAGAGEHMTMGMSGMAAMQLAAQTMH 1530
            +P ++DKR KRGFSKRVTLRDLERYFEYPIE+VSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTA G DRQRLQ+QLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDA+TLLRTG                         F + G+P                                                       XXXXXXXXXXXX +  SPYGMPP M MAGM MGYSPYVH+AAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 GS P+H YG   MY GYPGMMG+PYPFQAHGYPGMPGYGVPGMG+YPSL  GGG       + GMSGMAAMQLAAQ+MH
Sbjct:   92 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTGGXXXXXXXXXXXXXXXXXXXXXATEFGDLGNP------------TSPLAEAPGVPQEEAGPAGVGEASAGGDGAYGPDIQAMEEAAAXXXXXXXXXXXXXAAQSPYGMPPHMSMAGMGMGYSPYVHMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS-PMHGYGLHAMYGGYPGMMGMPYPFQAHGYPGMPGYGVPGMGSYPSLAAGGGDPTLASSSFGMSGMAAMQLAAQSMH 489
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 2.050e-66
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 1 
Query:  409 MPPVDDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRTG 807
            +P ++DKR KRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTA G DRQRLQ+QLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDA+TLLRTG
Sbjct:   90 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTG 222
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.630e-16
Identity = 47/129 (36.43%), Postives = 80/129 (62.02%), Query Frame = 1 
Query:  427 KRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI-KYVELLARTALGQDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRTGV 810
            ++  R   +R+TL  LE  +  P+   ++ +GVS T++K+LCR+YGI+RWP+RQIRS+ K + K+++  A+     D     +++  L  K+ ++ + A+ G +A +R +I   RP ELDAD L  +GV
Sbjct:   90 RQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSSGV 218
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.150e-16
Identity = 43/121 (35.54%), Postives = 83/121 (68.60%), Query Frame = 1 
Query:  454 RVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAL-GQDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRTGVP 813
            ++TL  L+ Y+  P+ E++K +G+S T++K++CRK+GI+RWP+RQIRS+NK+ + ++  A+ AL  ++   ++ QL  L  KK+L+ + A++G  + +R ++    PE+L+ +++    VP
Sbjct:   10 QITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEESVFDVKVP 130
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.650e-16
Identity = 44/115 (38.26%), Postives = 77/115 (66.96%), Query Frame = 1 
Query:  457 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYV-ELLARTALGQDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLL 798
            +TL  L+ ++  P+ E++K +G+S T++K++CRKYGI+RWP+RQIRS+NKS + + E +      ++R  LQ QL  L  KK+L+ + A++G  + +R ++    PE+L+ D + 
Sbjct:   14 ITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAVF 128
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI)

HSP 1 Score: 84.0 bits (206), Expect = 1.360e-13
Identity = 40/115 (34.78%), Postives = 74/115 (64.35%), Query Frame = 1 
Query:  457 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQ-RLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLL 798
            +TL  L+ Y+  P+ E++K +G+S T++K++CRK+GI+RWP+RQIRS+NK+I+ +     +    D    L++Q+  L  K++L+ + A++G    +R +I    PE L  +++ 
Sbjct:   14 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQEESMF 128
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: G4ZYN2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZYN2_PHYSP)

HSP 1 Score: 81.3 bits (199), Expect = 2.940e-12
Identity = 42/117 (35.90%), Postives = 75/117 (64.10%), Query Frame = 1 
Query:  430 RTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKS---ILQMRP 771
            R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G +R++ +DQ+V+L  K++ +       +S + + S   +L  RP
Sbjct:  144 RVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESVIADPNKDSSMRPKTSPPSLLTPRP 260
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BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: A0A2D4BXJ0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXJ0_PYTIN)

HSP 1 Score: 80.9 bits (198), Expect = 3.800e-12
Identity = 38/93 (40.86%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  430 RTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQRLQDQLVSLHYKKQLI 708
            R K   +K +T+ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G +R + +DQ++SL  K+  +
Sbjct:  154 RVKSLVTKHITIDELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAQGPERDKYRDQIISLKLKRDAV 246
[Close]
BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: D0NKH4_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NKH4_PHYIT)

HSP 1 Score: 80.5 bits (197), Expect = 4.200e-12
Identity = 37/93 (39.78%), Postives = 66/93 (70.97%), Query Frame = 1 
Query:  430 RTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQRLQDQLVSLHYKKQLI 708
            R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G +R++ +DQ+V+L  K++ +
Sbjct:  131 RVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESV 223
[Close]
BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Match: A0A0P1AY22_PLAHL (SANT/Myb domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY22_PLAHL)

HSP 1 Score: 80.5 bits (197), Expect = 4.350e-12
Identity = 37/93 (39.78%), Postives = 65/93 (69.89%), Query Frame = 1 
Query:  430 RTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQRLQDQLVSLHYKKQLI 708
            R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G +R+R +DQ+ +L  K++ +
Sbjct:  129 RVKSLVTKHISIEELRTHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSERERYRDQITNLKMKRECV 221
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3939.10238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0H9_9PHAE3.650e-9361.56RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LJT6_ECTSI2.050e-6693.23Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A836CMG7_9STRA2.630e-1636.43RWP-RK domain-containing protein n=1 Tax=Tribonema... [more]
A0A835YTG3_9STRA3.150e-1635.54Putative NIN-like transcription factor n=1 Tax=Tri... [more]
A0A835Z1M5_9STRA3.650e-1638.26Putative NIN-like transcription factor n=1 Tax=Tri... [more]
H6WBB7_VAULI1.360e-1334.78Putative NIN-like transcription factor n=1 Tax=Vau... [more]
G4ZYN2_PHYSP2.940e-1235.90Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A2D4BXJ0_PYTIN3.800e-1240.86Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0NKH4_PHYIT4.200e-1239.78Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A0P1AY22_PLAHL4.350e-1239.78SANT/Myb domain n=1 Tax=Plasmopara halstedii TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3939contigH-paniculata_contig3939:8245..13168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.8
Seed ortholog evalue1.7e-14
Seed eggNOG ortholog67593.Physo141522
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RWP-RK domain
EggNOG OGs3Q7H8@4776,KOG0724@1,KOG0724@2759
Ec32 ortholog descriptionNIN-like transcription factor
Ec32 orthologEc-23_000070.1
COG Functional cat.K
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size2541
Cds size1668
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3939.10238.1prot_H-paniculata_contig3939.10238.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3939 8482..12532 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930207.3878984-UTR-H-paniculata_contig3939:8244..84811622930207.3878984-UTR-H-paniculata_contig3939:8244..8481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3939 8245..8481 +
1691481190.8401697-UTR-H-paniculata_contig3939:8244..84811691481190.8401697-UTR-H-paniculata_contig3939:8244..8481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3939 8245..8481 +
1622930207.4287188-UTR-H-paniculata_contig3939:12532..131681622930207.4287188-UTR-H-paniculata_contig3939:12532..13168Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3939 12533..13168 +
1691481190.877679-UTR-H-paniculata_contig3939:12532..131681691481190.877679-UTR-H-paniculata_contig3939:12532..13168Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3939 12533..13168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930207.4011357-CDS-H-paniculata_contig3939:8481..88321622930207.4011357-CDS-H-paniculata_contig3939:8481..8832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3939 8482..8832 +
1691481190.8585017-CDS-H-paniculata_contig3939:8481..88321691481190.8585017-CDS-H-paniculata_contig3939:8481..8832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3939 8482..8832 +
1622930207.4131732-CDS-H-paniculata_contig3939:11215..125321622930207.4131732-CDS-H-paniculata_contig3939:11215..12532Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3939 11216..12532 +
1691481190.8683555-CDS-H-paniculata_contig3939:11215..125321691481190.8683555-CDS-H-paniculata_contig3939:11215..12532Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3939 11216..12532 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3939.10238.1

>prot_H-paniculata_contig3939.10238.1 ID=prot_H-paniculata_contig3939.10238.1|Name=mRNA_H-paniculata_contig3939.10238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=556bp
MSQIASAATSGQPNGSLPEQSHAAMSMAYAAAANAAAAGAAGIGDSGSGD
GDEEFDDMPPVDDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTI
IKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTALGQDRQRLQDQLVSL
HYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRTGVPHGAGSPGF
AGPEAGGGGSFAEAGSPGHHAVGGGGGSANAEEERAAAMQIAAAAQHAMQ
HVVQQAAAGGAAGGGDQQRDMHSPAAAAAAAAAAVSQGSPYGMPPQMQMA
GMAMGYSPYVHLAAAQAQQHAMAHQQQGEGTSSGGSGGGGGGGGGGGAGA
GQASGSVPIHTYGQFGMYAGYPGMMGLPYPFQAHGYPGMPGYGVPGMGAY
PSLGGGAGAGEHMTMGMSGMAAMQLAAQTMHHHHHPYGVHEQHEAGAYHE
HQQRQHEAVAHATAEHEGAPTAPVNPRTPPPPETQHDAVAVGISNLDVNG
NADAGRAPYGGAAENGTAASGDGQSHGAGEGPEGGASAQGARAEATPQQA
GEAPA*
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mRNA from alignment at H-paniculata_contig3939:8245..13168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3939.10238.1 ID=mRNA_H-paniculata_contig3939.10238.1|Name=mRNA_H-paniculata_contig3939.10238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4924bp|location=Sequence derived from alignment at H-paniculata_contig3939:8245..13168+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCACTTGCGGTGTAAACAAAGGACACTTTCGAAATATCCGAGGCGGCGC
TATACTGTACTGTCTGTATCTTTCGCCCTAGATACCCCCAACGTCGGTGG
GCCAAGGCGCTTGTGTTTACTTTCTCTCGCGAAAGACCCACGGAAGGTCT
TCACCCCGGCTTGTGTTCCTTCTCTATCTTCTGACTGCCCAAAAAAATAA
TCCAGAAAACAGGTTCGGAACAGGTTTTTTCAGGGCAATGTCCCAAATCG
CGTCTGCGGCAACCTCGGGTCAACCGAACGGGTCGCTACCCGAGCAGAGC
CACGCAGCGATGAGCATGGCCTACGCAGCGGCTGCGAATGCCGCCGCAGC
CGGGGCCGCAGGGATTGGTGACAGCGGAAGCGGGGATGGGGACGAGGAGT
TCGATGACATGCCGCCGGTCGATGACAAGCGGACAAAGCGAGGGTTTAGC
AAGAGGGTGACGCTGAGAGATTTGGAGCGGTATTTCGAGTACCCCATCGA
GGAAGTGTCGAAGATGATGGGCGTTAGCACCACGATCATCAAGCGGCTGT
GTCGAAAGTATGGCATCAAGCGGTGGCCTTACCGCCAGGTGCGCATCGTT
TTTGTGTTTCGCGTGCGTTGGTTTGTGAATAGCTGTTGCGATGGCTGCGG
CTGCTGCGATGTCTGGTTTGTGTGAGGGCAAAGCATTTTCCAACTCGTAC
CTACCACCTGTGCAGCTGCTGGCTGTCTTTTTTCCTTTACACGAGCTGCA
CGGACGCAGATCACAGCCTGCCGCCGTTCGAGGTGTTTTGCGTGGGAGGA
TCGGCCACCGCGCTGCCGCATCATCTACGCTTGGTAGATGTTGGTGGGCA
AGCGTTGTTCAGCGTAGCGTGAGGTCTACTGTATACTCTAGGAGGTGCTT
GCACTGAGAGTAGATCTTCCACACGTAAGAGTAAGGGACAGCTGGTCGAT
GAGCACGATTTTGCTGTGCTCCGATGAACGAAAAAGTATCCATCTGTGAG
CGACGTTTCACCAACCGGCACCCAGCAGGGAGTTTGGACGAAAAAGACAC
CAACCAAAGCACTCTCCGCTCTCGAGTAGATCAGATCGACACCGCTGACT
GCGAGCCACACCTCTTGGACTCGACGTGGGCGCTCAGCTGCCTCGTGTTC
GATCACCAGCTAGATTTGTGACCCCGCCTTGAGTAAAGCCCTGAATCATC
CCAGTTTATGATGCTGCGCGCGATCTCATAATATTTCCCACCCTTTTGCC
TGCTGTAGTTTGCACGTGTTACCTCTTTCTGTATCTTCAAGTCAATTTAT
CACACGTGCGTTTTTGGGGCCGCTCTTTTTCCGTTGTGGACACTCCCCAG
ATGTATGTTACCATCTCGCCCTGTGTTGGTGAACCGGTAGCTCTGAATGA
GTAGCTCTCTTCTTACACCAACATGGTACTAGAGCTCTCGATTCCGTAAT
GCACATGGCCGATAAGGGCGTATAATTTCGCGATGACGAACTTCCGTCCT
GCTTGTGAGATCTTCTCTTGGCGTGCTTGTCTGTGCGGTCGGCCATTACA
TAATTCCGACTGACTGTACTGTCTGTCTCTAGCCCGCATAATCAATGTAA
GGTAGGATCGAATTGCCCTCCGTTACACGCACTATCTCATGAGCAACCAC
AGATTGTCTGCACCACTTCGCTTACCCCTTGAGTTTACAGACAGTAAGCA
GTAAACATGTGTGGCAAGGATGTTGTGGTTGCCATAGTATGGCCAGTGGA
GTTTCAACATGAGTGTGATGTACGTAAGATACTACTCGCAGTGTTCAGTG
AACGATTTTTTTTTGTTGGTAGACTGACTGTACTTCGTGGTACGATAAAA
TCAAGGCCGGTTCCGGCATTAAATTGGTTCTTCACAATGCCGGTATTTTT
CTCTGGTCTCGGCCGGCCTGCGTGGTGGATCTGCCTGATACGCATTCAGA
AGGCATCATGAATACAAAATGTACGCGGTGAAACCAAATATAACACCACA
AGGTTTAAGATTGGCATCGTGCTGAATTGCGTAACCATGGTACTAACTGA
GACAATTTCGGCCGTTCACCTAGATCCTCGTGATTTCAATTTACGTATGT
GTGTATGTTTATGTGTGTGTATTATGTGTATTGTGTGTTTCACCAACCCT
TGGTATGTAGTTACGTATATGTGTTGTGTATGTATACGTGTGTATATTGT
GTGCTTCACCAAGTCTTGCTTGGAATGTAGAATCCCCCCCACCCACCGTT
GGTCTGTTGCTCCTCTGCTGCACCAAATATATGGCCTAATTTGAAGGAAA
ATGAAGGCCAGATTTAGTTTTTTTGCCCAACGTCCGCCGATCCTCCTAGC
GAGGCTCCCTCTTTCGCCGAGGGGGGGGCGTTCTCCTCGCGCTTCGCGTT
TGCCTGCAGTTGCACCACAACAGGCGATGTGGTATCGCTTCCTTCGATCG
ATTCACAACCCTATCTTTTGGCCTTTCAGCTCGAACAGAGTGCGACAATC
CGGCGGAAAAAATTGTGTTCTGTGCTGGAGTCAGTGTCGTCTATTCGATT
GTTTTTCCACGGAAAAAAATGTACAACTCACAAATTTCGGGGACCAGCTG
GGCAAGATCCATCACACTATGCTCGAAATCGTCCATTTTTGCCAACCACA
TATTTTCACGTTGTCATTTTTTTCACCTGGAAAGCAATCGGCTCATACTT
ATTACCAACTGTTACTTTACATTTTTTTTCATGTTGTGAACTACTACAAC
TTTTGTGTTGACTAGTTTTTGCTATGGAGCTCAAAACAATTTTTGCGCTT
ACTTTGTGGCCGTCAAAAAGCTTTGTACTGAGGCTTCTCGTACTCAAGAT
TTCCTATAACTGTTCCATCCTTCAGCCCTATGGTATCATCACCAAAGCCG
AACTTAATGCCTTCGCCAAAAATTCTAAACCGTTACCGATGCAAACAATT
CCCGTTGCATGTGTTCCGCAGATTCGAAGCGTAAATAAGTCCATCAAGTA
CGTCGAACTGCTGGCACGCACGGCTCTCGGTCAAGACCGGCAACGCCTGC
AAGATCAACTCGTGTCCCTTCACTACAAGAAACAGCTCATATGCCAAGCG
GCCACCACTGGCGCGTCGGCCAAGGTACGCAAATCTATCCTCCAAATGCG
ACCCGAAGAGCTCGACGCCGACACGCTCCTCCGTACGGGTGTACCGCACG
GAGCGGGCTCGCCAGGTTTCGCCGGCCCTGAAGCTGGGGGCGGTGGCAGC
TTCGCCGAGGCTGGCTCTCCGGGCCATCACGCGGTCGGCGGCGGTGGCGG
CAGCGCCAATGCGGAGGAAGAACGAGCTGCCGCAATGCAAATAGCAGCGG
CTGCCCAGCATGCGATGCAGCACGTGGTGCAACAAGCTGCGGCTGGCGGG
GCGGCTGGCGGCGGGGATCAGCAGAGAGACATGCACTCGCCGGCAGCCGC
CGCCGCTGCTGCTGCTGCTGCCGTGTCGCAAGGATCGCCCTACGGCATGC
CGCCACAAATGCAGATGGCGGGAATGGCAATGGGTTACAGCCCGTACGTA
CACCTGGCTGCGGCCCAAGCGCAGCAGCACGCCATGGCGCATCAACAGCA
AGGGGAGGGGACTAGTTCGGGTGGCAGCGGCGGGGGCGGCGGCGGCGGCG
GCGGTGGCGGTGCGGGAGCCGGACAAGCCAGCGGCAGTGTCCCGATACAT
ACTTACGGTCAGTTCGGCATGTACGCAGGGTATCCGGGAATGATGGGCTT
ACCGTATCCGTTTCAAGCGCACGGGTACCCGGGTATGCCGGGGTACGGGG
TGCCCGGCATGGGGGCATACCCTAGCCTCGGGGGCGGCGCTGGTGCGGGG
GAACACATGACAATGGGGATGAGCGGCATGGCGGCAATGCAGCTGGCCGC
GCAGACGATGCATCATCACCACCACCCATACGGCGTGCATGAGCAGCACG
AAGCAGGAGCGTACCACGAACATCAACAGCGGCAGCACGAGGCTGTGGCT
CATGCCACGGCTGAACATGAAGGTGCCCCCACCGCCCCTGTTAATCCTAG
AACCCCGCCTCCGCCAGAGACCCAACATGATGCCGTGGCTGTTGGGATTT
CGAACCTCGACGTGAACGGAAACGCGGATGCAGGCCGCGCCCCATATGGT
GGCGCCGCAGAAAATGGAACTGCCGCCTCAGGGGATGGGCAATCCCACGG
TGCTGGCGAGGGACCAGAGGGCGGCGCAAGTGCTCAGGGTGCGAGGGCTG
AAGCGACGCCGCAACAGGCTGGGGAGGCCCCAGCGTAAACGACCTTTTTT
TACTAGCGTGTGCGTACGAGGAAATCGTTCTGAATTGATTCGTTGAGTAG
AGTTTTCTTCACGTGCATTGTTAGAGGAGTTTCGCTCAGCACCAGCGAGG
TGTCGGTCTGGGTACAGATGCGAACAACATGTGCATATTGACCTCCAGAT
TCTGCTAGTATGTGTTGAGGCGGGGAGATGTGATGAGCTTGGCTTCTCGA
CATGGACATATGGAACAGGGTTGTACGCCCTTTTGGAATATGGGTGTTGT
CGCTTGCTCAGTTGCTTTGCAAGTGCTTGGGAGGTGTAGTGTGATGGTCG
CACCTACGAATCGCAGGCTGAAATTCATCTACTTGGCTTGCACCTTGGTA
CGATTTTCTGCGCTTGATGACACTAATTGTATTGTTTACTTCCCCAGGTT
CATTATCGCTGAAGCGTACTGATTCTACTTGTTGTAAAAACGTTATAATA
CCAGGATGCACTCGCCTCTCGGAGTGCGTGGGCACCGCAAACTCAGCGAT
TAACGTTTCAGTTGGTGCCAACTACGTAGCCGAAAATGACGCCGTTTCCT
CGCCATGTTGTAAGTATTACAGCTGCAGGACGCATGGTGCCATGCCGAAC
CGCACCCTGTTCTCGCGCTAGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig3939:8245..13168+

>mRNA_H-paniculata_contig3939.10238.1 ID=mRNA_H-paniculata_contig3939.10238.1|Name=mRNA_H-paniculata_contig3939.10238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3336bp|location=Sequence derived from alignment at H-paniculata_contig3939:8245..13168+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCCAAATCGCGTCTGCGGCAACCTCGGGTCAACCGAACGGGTCGCT
ACCCGAGCAGAGCCACGCAGCGATGAGCATGGCCTACGCAGCGGCTGCGA
ATGCCGCCGCAGCCGGGGCCGCAGGGATTGGTGACAGCGGAAGCGGGGAT
GGGGACGAGGAGTTCGATGACATGCCGCCGGTCGATGACAAGCGGACAAA
GCGAGGGTTTAGCAAGAGGGTGACGCTGAGAGATTTGGAGCGGTATTTCG
AGTACCCCATCGAGGAAGTGTCGAAGATGATGGGCGTTAGCACCACGATC
ATCAAGCGGCTGTGTCGAAAGTATGGCATCAAGCGGTGGCCTTACCGCCA
GATGTCCCAAATCGCGTCTGCGGCAACCTCGGGTCAACCGAACGGGTCGC
TACCCGAGCAGAGCCACGCAGCGATGAGCATGGCCTACGCAGCGGCTGCG
AATGCCGCCGCAGCCGGGGCCGCAGGGATTGGTGACAGCGGAAGCGGGGA
TGGGGACGAGGAGTTCGATGACATGCCGCCGGTCGATGACAAGCGGACAA
AGCGAGGGTTTAGCAAGAGGGTGACGCTGAGAGATTTGGAGCGGTATTTC
GAGTACCCCATCGAGGAAGTGTCGAAGATGATGGGCGTTAGCACCACGAT
CATCAAGCGGCTGTGTCGAAAGTATGGCATCAAGCGGTGGCCTTACCGCC
AGATTCGAAGCGTAAATAAGTCCATCAAGTACGTCGAACTGCTGGCACGC
ACGGCTCTCGGTCAAGACCGGCAACGCCTGCAAGATCAACTCGTGTCCCT
TCACTACAAGAAACAGCTCATATGCCAAGCGGCCACCACTGGCGCGTCGG
CCAAGGTACGCAAATCTATCCTCCAAATGCGACCCGAAGAGCTCGACGCC
GACACGCTCCTCCGTACGGGTGTACCGCACGGAGCGGGCTCGCCAGGTTT
CGCCGGCCCTGAAGCTGGGGGCGGTGGCAGCTTCGCCGAGGCTGGCTCTC
CGGGCCATCACGCGGTCGGCGGCGGTGGCGGCAGCGCCAATGCGGAGGAA
GAACGAGCTGCCGCAATGCAAATAGCAGCGGCTGCCCAGCATGCGATGCA
GCACGTGGTGCAACAAGCTGCGGCTGGCGGGGCGGCTGGCGGCGGGGATC
AGCAGAGAGACATGCACTCGCCGGCAGCCGCCGCCGCTGCTGCTGCTGCT
GCCGTGTCGCAAGGATCGCCCTACGGCATGCCGCCACAAATGCAGATGGC
GGGAATGGCAATGGGTTACAGCCCGTACGTACACCTGGCTGCGGCCCAAG
CGCAGCAGCACGCCATGGCGCATCAACAGCAAGGGGAGGGGACTAGTTCG
GGTGGCAGCGGCGGGGGCGGCGGCGGCGGCGGCGGTGGCGGTGCGGGAGC
CGGACAAGCCAGCGGCAGTGTCCCGATACATACTTACGGTCAGTTCGGCA
TGTACGCAGGGTATCCGGGAATGATGGGCTTACCGTATCCGTTTCAAGCG
CACGGGTACCCGGGTATGCCGGGGTACGGGGTGCCCGGCATGGGGGCATA
CCCTAGCCTCGGGGGCGGCGCTGGTGCGGGGGAACACATGACAATGGGGA
TGAGCGGCATGGCGGCAATGCAGCTGGCCGCGCAGACGATGCATCATCAC
CACCACCCATACGGCGTGCATGAGCAGCACGAAGCAGGAGCGTACCACGA
ACATCAACAGCGGCAGCACGAGGCTGTGGCTCATGCCACGGCTGAACATG
AAGGTGCCCCCACCGCCCCTGTTAATCCTAGAACCCCGCCTCCGCCAGAG
ACCCAACATGATGCCGTGGCTGTTGGGATTTCGAACCTCGACGTGAACGG
AAACGCGGATGCAGGCCGCGCCCCATATGGTGGCGCCGCAGAAAATGGAA
CTGCCGCCTCAGGGGATGGGCAATCCCACGGTGCTGGCGAGGGACCAGAG
GGCGGCGCAAGTGCTCAGGGTGCGAGGGCTGAAGCGACGCCGCAACAGGC
TGGGGAGGCCCCAGCGTAAATTCGAAGCGTAAATAAGTCCATCAAGTACG
TCGAACTGCTGGCACGCACGGCTCTCGGTCAAGACCGGCAACGCCTGCAA
GATCAACTCGTGTCCCTTCACTACAAGAAACAGCTCATATGCCAAGCGGC
CACCACTGGCGCGTCGGCCAAGGTACGCAAATCTATCCTCCAAATGCGAC
CCGAAGAGCTCGACGCCGACACGCTCCTCCGTACGGGTGTACCGCACGGA
GCGGGCTCGCCAGGTTTCGCCGGCCCTGAAGCTGGGGGCGGTGGCAGCTT
CGCCGAGGCTGGCTCTCCGGGCCATCACGCGGTCGGCGGCGGTGGCGGCA
GCGCCAATGCGGAGGAAGAACGAGCTGCCGCAATGCAAATAGCAGCGGCT
GCCCAGCATGCGATGCAGCACGTGGTGCAACAAGCTGCGGCTGGCGGGGC
GGCTGGCGGCGGGGATCAGCAGAGAGACATGCACTCGCCGGCAGCCGCCG
CCGCTGCTGCTGCTGCTGCCGTGTCGCAAGGATCGCCCTACGGCATGCCG
CCACAAATGCAGATGGCGGGAATGGCAATGGGTTACAGCCCGTACGTACA
CCTGGCTGCGGCCCAAGCGCAGCAGCACGCCATGGCGCATCAACAGCAAG
GGGAGGGGACTAGTTCGGGTGGCAGCGGCGGGGGCGGCGGCGGCGGCGGC
GGTGGCGGTGCGGGAGCCGGACAAGCCAGCGGCAGTGTCCCGATACATAC
TTACGGTCAGTTCGGCATGTACGCAGGGTATCCGGGAATGATGGGCTTAC
CGTATCCGTTTCAAGCGCACGGGTACCCGGGTATGCCGGGGTACGGGGTG
CCCGGCATGGGGGCATACCCTAGCCTCGGGGGCGGCGCTGGTGCGGGGGA
ACACATGACAATGGGGATGAGCGGCATGGCGGCAATGCAGCTGGCCGCGC
AGACGATGCATCATCACCACCACCCATACGGCGTGCATGAGCAGCACGAA
GCAGGAGCGTACCACGAACATCAACAGCGGCAGCACGAGGCTGTGGCTCA
TGCCACGGCTGAACATGAAGGTGCCCCCACCGCCCCTGTTAATCCTAGAA
CCCCGCCTCCGCCAGAGACCCAACATGATGCCGTGGCTGTTGGGATTTCG
AACCTCGACGTGAACGGAAACGCGGATGCAGGCCGCGCCCCATATGGTGG
CGCCGCAGAAAATGGAACTGCCGCCTCAGGGGATGGGCAATCCCACGGTG
CTGGCGAGGGACCAGAGGGCGGCGCAAGTGCTCAGGGTGCGAGGGCTGAA
GCGACGCCGCAACAGGCTGGGGAGGCCCCAGCGTAA
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