mRNA_H-paniculata_contig39346.10228.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 210 bits (534), Expect = 8.290e-62 Identity = 106/177 (59.89%), Postives = 118/177 (66.67%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEMFPNKKMILVLDNASYHHRYDPEVGVPETNSKKYN--------------------------------VPAEGSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYKS 435
GDYHDAMTDKMFM+WLE L P K + NKKMILVLDNASYHH YD EVGVPE+NSK YN VPA G+ NSKCG G+S EVA ATRAF Q KHP +L+E+VE FM+ GW+LI TPPYMPSFQPIELFWQHGKQYVSFN+K+
Sbjct: 366 GDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSSAGVRSKKYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKT 542
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.450e-52 Identity = 93/178 (52.25%), Postives = 114/178 (64.04%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEMFPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV----------------------------PAEGSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYKSDCSIL 450
GDYH+AMTD MFM WL+H L P F NKKM LVLDNASYHH +D EV VPETNSKKYNV PA+GSL N N K G+SKEE+A+ TR + ++ P++L E+ E +M ++GW LI TPPYMP+FQPIELFWQHGK YVS +++ +IL
Sbjct: 249 GDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNIL 424
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE) HSP 1 Score: 182 bits (461), Expect = 1.930e-52 Identity = 92/178 (51.69%), Postives = 114/178 (64.04%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEMFPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV----------------------------PAEGSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYKSDCSIL 450
GDYH+AMTD MFM WL+H L P F NKKM LVLDNASYHH +D EV VPETNSKKYNV PA+GSL N N K G+SKEE+A+ TR + ++ P++L E+ E +M ++GW LI TPPYMP+FQPIELFWQHGK YVS +++ ++L
Sbjct: 211 GDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNML 386
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 182 bits (461), Expect = 3.260e-52 Identity = 92/178 (51.69%), Postives = 114/178 (64.04%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEMFPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV----------------------------PAEGSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYKSDCSIL 450
GDYH+AMTD MFM WL+H L P F NKKM LVLDNASYHH +D EV VPETNSKKYNV PA+GSL N N K G+SKEE+A+ TR + ++ P++L E+ E +M ++GW LI TPPYMP+FQPIELFWQHGK YVS +++ ++L
Sbjct: 293 GDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNML 468
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5KUM1_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM1_9PHAE) HSP 1 Score: 177 bits (449), Expect = 3.980e-52 Identity = 96/174 (55.17%), Postives = 111/174 (63.79%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEM--FPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV---------------------------PAE-GSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYK 432
GDYH AMTD MFM+WLEH L P + F ++MILVLDNASYHH +D EV VPETN+KK+NV P E GS F ++ G G+S+ EVA ATR +I HPERL ERV FM K+GW LI TPPYMPSFQPIELFWQHGKQYVS N++
Sbjct: 145 GDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGRQMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVYNFEVPTEPGSSFPAGNREG-GVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFE 317
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 175 bits (443), Expect = 7.590e-51 Identity = 94/174 (54.02%), Postives = 111/174 (63.79%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEM--FPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV---------------------------PAE-GSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYK 432
GDYH AMTD MFM+WLEH L P + F K+MILVLDNASYHH +D +V +PE+N+KK+NV P E GS F ++ G G+S+ EVA ATR +I HPERL ERV FM K+GW LI TPPYMPSFQPIELFWQHGKQYVS N++
Sbjct: 92 GDYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQGVYNFEVPTEPGSSFPAGNREG-GVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFE 264
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5KF48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF48_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.780e-50 Identity = 91/178 (51.12%), Postives = 113/178 (63.48%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEMFPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV----------------------------PAEGSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYKSDCSIL 450
G+YHDAMTD FM WL+H L P F NKKM LVLDNASYHH +D E+ VPETNSKKYNV PAEGSL N N K G+SKEE+A+ TR + ++ P++L E+ E +M ++GW LI TPPYMP+FQPIELFWQHGK YVS +++ ++L
Sbjct: 234 GEYHDAMTDGTFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEELKVPETNSKKYNVELLRKYGYTAFEVTRESEGMAAEYNFEVPAEGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNML 409
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5JRA8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA8_9PHAE) HSP 1 Score: 169 bits (429), Expect = 5.020e-50 Identity = 85/164 (51.83%), Postives = 105/164 (64.02%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEMFPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV----------------------------PAEGSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGK 408
GDYH+AMTD MFM WL+H L P F NKKM LVL+NASYHH +D EV VPETNSKKYNV PA+GSL + N K G+SK+E+A+ TR + ++ P++L E+ E +M ++GW LI TPPYMP+FQPIELFWQHGK
Sbjct: 94 GDYHNAMTDGMFMQWLKHRLTPAFDPQFKNKKMFLVLNNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLTDANRK--NGVSKDEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGK 255
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 178 bits (451), Expect = 7.220e-50 Identity = 97/176 (55.11%), Postives = 111/176 (63.07%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEM--FPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV-----------------------------PAE-GSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYK 432
GDYH AMTD MFM+WLEH L P + F K+MILVLDNASYHH +D EV VPETN+KK+NV P E GS F ++ G G+S+ EVA ATR +I HPERL ERV FM K+GW LI TPPYMPSFQPIELFWQHGKQYVS N++
Sbjct: 362 GDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREG-GVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFE 536
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE) HSP 1 Score: 176 bits (446), Expect = 8.910e-50 Identity = 96/176 (54.55%), Postives = 111/176 (63.07%), Query Frame = 1
Query: 1 GDYHDAMTDKMFMDWLEHGLKPVSKEM--FPNKKMILVLDNASYHHRYDPEVGVPETNSKKYNV-----------------------------PAE-GSLFNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERVEAFMSKEGWELIRTPPYMPSFQPIELFWQHGKQYVSFNYK 432
GD+H AMTD MFM+WLEH L P + F K+MILVLDNASYHH +D EV VPETN+KK+NV P E GS F ++ G G+S+ EVA ATR +I HPERL ERV FM K+GW LI TPPYMPSFQPIELFWQHGKQYVS N++
Sbjct: 261 GDHHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREG-GVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFE 435 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39346.10228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39346.10228.1 >prot_H-paniculata_contig39346.10228.1 ID=prot_H-paniculata_contig39346.10228.1|Name=mRNA_H-paniculata_contig39346.10228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp MTDKMFMDWLEHGLKPVSKEMFPNKKMILVLDNASYHHRYDPEVGVPETNback to top mRNA from alignment at H-paniculata_contig39346:237..803- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39346.10228.1 ID=mRNA_H-paniculata_contig39346.10228.1|Name=mRNA_H-paniculata_contig39346.10228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=567bp|location=Sequence derived from alignment at H-paniculata_contig39346:237..803- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39346:237..803- >mRNA_H-paniculata_contig39346.10228.1 ID=mRNA_H-paniculata_contig39346.10228.1|Name=mRNA_H-paniculata_contig39346.10228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=876bp|location=Sequence derived from alignment at H-paniculata_contig39346:237..803- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |