mRNA_H-paniculata_contig392.10202.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: D8LKA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA8_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 9.030e-165 Identity = 350/640 (54.69%), Postives = 407/640 (63.59%), Query Frame = 2
Query: 86 MAMQMPPPSPRTEKRRLAGAAEQLEVLASPSKRGAPTP-RSFFST-GPDPPRTPADVSWIREQAGGTPRTLDREFLEPNSSGGQNNGNARTPASSNNTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTASGGRGKTYNRRTWTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVARGVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSK-VGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFRNATSTGGVRRGRSRADVTVGSSSTYANRGKVKPSGLPTEILPQAPVVRD-GGMSVSGRVDSRRNGGRSGAATFLPVEPTSASGATLTEREKALMDHAFKTGLNAAAGGGVGVAPPEVIDAIAKGDGMEQLTLTTEDDDVFAPLSAALLRDGSEVG-CSPE-MPPPSPTASPLLKPRKRASDCSFLGQDLADGWGADEDPALADLYRSLDNIGESLFNEDNFELTFDFDSVDKPSAASASNGALARSPGMGHRRSCSAGSPPSWINQVPG--GQGHKDVSPFRRAAAQAAATLGKQRVSPVTQKQG---GRDLQVASER 1972
MAM MPPPSPRTEKRRLAGA +LEVLASPSKRG P+ RSFFST G D PRTPADVSWIREQAG TPR LDR+FL A +PA++ + XXXXXXXXXXXXXXXXXXXXXX + K +NRRTWTKEEN+QL +GI+SLG P + GK+EWN IA FLK SRTGTQCATHWKMV+KPALLKGVWSAEED++I++ VARGVTDW EVA+ LPKRK KHCRERW+NHLDP+L K GWT AEE L+SAVEA+GT+W+ IAR PGRSEA IQQHWN +VFRN+ G RRGRS + G + RG+ K S LP E P + D GG + R ++ +P TLT+REKALMDHAFKTGLN G + LTL++E+DD+FAPL+AALLRD G CSP MPPPSPT SPL K K+ D + +G L DGW D+DPALADLYRSLDNIGESLFNEDNFEL+FDFD+V KP A S +G SC + PS PG K SPFR+AAA AAATLG+Q + QG G++L+ A R
Sbjct: 1 MAMNMPPPSPRTEKRRLAGAPAELEVLASPSKRGTPSKNRSFFSTSGSDNPRTPADVSWIREQAGTTPRALDRDFL------------AASPAAAVDVGXXXXXXXXXXXXXXXXXXXXXX----------------------------------KSKMFNRRTWTKEENDQLHEGIASLGGPNSNFGKNEWNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSAEEDAVIFDCVARGVTDWTEVAAALPKRKPKHCRERWSNHLDPSLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWNELVFRNSV---GGRRGRSGME--SGGGVACSGRGRAKASTLPGE--PSEIFLGDLGGQDLIARETEQQQ-----------QQPA----VTLTDREKALMDHAFKTGLN--------------------GCDIGSLTLSSEEDDLFAPLTAALLRDEEGCGGCSPSGMPPPSPTCSPL-KAHKQQPDYTSIGDQLGDGWVVDDDPALADLYRSLDNIGESLFNEDNFELSFDFDNVGKP-APSCDSGL-----------SCGQQTNPSKSWDAPGLLPSQEKSGSPFRQAAANAAATLGRQHSPAKREPQGPSKGKELEEACAR 539
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A6H5JZ10_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ10_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 9.980e-119 Identity = 267/554 (48.19%), Postives = 314/554 (56.68%), Query Frame = 2
Query: 650 EWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVARGVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSK-VGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFRNATSTGGVRRGRSRADVTVGSSSTYANRGKVKPSGLPTEILPQAPVVRD-GGMSVSGRVDSRRNGGRSGAATFLPVEPTSASGATLTEREKALMDHAFKTGLNAAAGGG------------VGVAPPEVIDAIA---KGDGMEQLTLTTEDDDVFAPLSAALLRDGSEVG-CSPE-MPPPSPTASPLLKPRKRASDCSFLGQDLADGWGADEDPALADLYRSLDNIGESLFNEDNFELTFDFDSVDKPSAASASNGALARSPGMGHRRSCSAGSPPSWINQVPGGQGHKDVS--PFRRAAAQAAATLGKQRVSPVTQKQG---GRDLQVASERTAGTVRTTVQRGQNVGTANVSAPAPGAA------------DP--GPRVKQGLLRRLFSDMNSDKLTRPSSSYPPFATVRGCLSEANASP 2197
EWN IA FLK SRTGTQCATHWKMV+KPALLKGVWS EED++I++ VARGVTDW EVA+ LPKRK KHCRERW+NHLDP L K GWT AEE L+SAVEA+GT+W+ IAR PGRSEA IQQHWN IVFRN+ G RRGR+ D G + RG+ K S LP E P + D GG + R + A T LT+REKALMDHAFKTGLNAA G A+A KG + LTL++E+DD+FAPL+AA CSP MPPPSPT SPL K K+ D + +G L DGW D+DPAL DLYRSLDNIGESLFNEDNFEL+FDFD+V KP A S +G SC + PS P ++ S PFR+AAA AAATLG Q + +G G++L+ A R +P GPRV+QG LRRL T+P S + PF+TVRGCLSEANA P
Sbjct: 8 EWNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSPEEDAVIFDCVARGVTDWAEVAAALPKRKPKHCRERWSNHLDPNLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWNEIVFRNSV---GGRRGRTGTD--SGGGVACSARGRAKASTLPAE--PSEIFLGDLGGQDLIARETEQXXXXXXXAVT-------------LTDREKALMDHAFKTGLNAATGSARVAQQXXXXXXXXXXXXXXXXGAVAXXPKGCDIGSLTLSSEEDDLFAPLTAAXXXXXXXXXXCSPSGMPPPSPTCSPL-KAHKQQPDYTSIGDQLGDGWVVDDDPALDDLYRSLDNIGESLFNEDNFELSFDFDNVGKP-APSCDSGL-----------SCGQPTNPSKSWDAPSLLPSQETSGSPFRQAAANAAATLGCQHSPAKREPRGSSKGKELEEACARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVAGPRVRQGFLRRLLFSAGVTP-TKPRS-HTPFSTVRGCLSEANAPP 526
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A7S2RZ51_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ51_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.440e-37 Identity = 74/162 (45.68%), Postives = 104/162 (64.20%), Query Frame = 2
Query: 572 WTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVARGVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFRNATST 1057
WTKEE+++L+ ++++G W IASD+L + R+ QC W+ VL+P L+KG W+ EED II + + G+T W+E+A +P R K CRERW NHLDP+L K GWT E+A L+ A G SWT+IA+LLPGRSE A++ WN+ R +T
Sbjct: 257 WTKEEDQKLRAAVAAVG-------PQNWKLIASDYLNDQRSDVQCLHRWQKVLQPGLVKGPWTKEEDQIIIDCIEAGITKWSEIAERIPGRIGKQCRERWFNHLDPSLKKGGWTEEEDAVLVEAQSKWGNSWTKIAKLLPGRSENAVKNRWNSATRRRQKAT 411
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A7S4DB75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB75_HETAK) HSP 1 Score: 148 bits (374), Expect = 5.270e-36 Identity = 66/157 (42.04%), Postives = 95/157 (60.51%), Query Frame = 2
Query: 572 WTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVARGVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFR 1042
W K E+E+L++G+ +LG W +A ++L RT QC W+ V+ P L+KG W+ EED++I + G+ W+++A +P R K RERW NHLDP L K GW+ E+A L A G +WT+IARLLPGRS+ +I+ HWN+ R
Sbjct: 82 WKKSEDEKLRKGVEALG-------PQAWRRVAQEYLDGKRTDMQCLHRWQKVVHPGLVKGAWTKEEDAVIVACMESGIKKWSKIAERIPGRIGKQVRERWFNHLDPHLKKGGWSPEEDAVLAEAQARWGNAWTKIARLLPGRSDNSIKNHWNSSTVR 231
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A7S2SVF3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF3_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.550e-35 Identity = 71/161 (44.10%), Postives = 96/161 (59.63%), Query Frame = 2
Query: 548 GKTYNRRTWTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVARGVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNT 1030
GK R WTK E+++L+QG++ G +W+ IA + L RT QC W+ VL+ L+KG W+ EED II + + G+ W+E+A +P R K RERW NHLDPT+ K WT E+A L A G SWT+IARLLPGR+E I+ WN+
Sbjct: 33 GKGVKRGRWTKNEDDRLKQGVTLYGTT-------DWSRIAKEVLGGQRTEQQCVQRWRKVLERGLVKGTWTKEEDQIIIDCIEAGINRWSEIAEYIPGRVGKQARERWFNHLDPTIKKGSWTDEEDAILTVAQARWGNSWTKIARLLPGRAENTIKNRWNS 186
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A8J2LKR5_9HEXA (Hypothetical protein n=2 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2LKR5_9HEXA) HSP 1 Score: 151 bits (381), Expect = 9.730e-35 Identity = 77/216 (35.65%), Postives = 119/216 (55.09%), Query Frame = 2
Query: 545 RGKTYNRRTWTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVAR-GVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFRNATSTGGVRRGRSRADVTVGSSSTYANRGKVKPSGLPTEILPQAPVVRD 1189
R K NR WTKEE+E L+ + + G +H+W+ +AS F R+ QC+T W VL P+L+KG W+ EED ++ VA+ G W +A L R K CRERW+NHL+P ++K W+ E+ + A E +G W++IA+LLPGR++ AI+ HWN+ + R S G ++ N+G S + E++ AP++ +
Sbjct: 32 RHKRINRGRWTKEEDELLKSLVLNHG-------EHDWSVVASHF--PDRSDMQCSTRWTKVLSPSLIKGQWTREEDELVVSLVAKYGAKKWTLIAKALKGRIGKQCRERWHNHLNPEINKAPWSAEEDRLITDAHEMYGNQWSRIAKLLPGRTDNAIKNHWNSTIRRRLLSKSGTKK----------------NKGAKSSSKVKVEVVEPAPIITE 222
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A7S0VPJ2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VPJ2_9CRYP) HSP 1 Score: 138 bits (347), Expect = 1.820e-33 Identity = 69/166 (41.57%), Postives = 95/166 (57.23%), Query Frame = 2
Query: 548 GKTYNRRTWTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVAR-GVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFR 1042
G+ N R WT EE+E+L + GK W +A + RT QC W+ VL P L+KG W+ EED + + V R G T W+ +AS LP R K CRERW+NHL+P + K W+V E+ T++ A HG W +IA LPGR++ AI+ HWN+ + R
Sbjct: 34 GEGKNSRKWTTEEDERLSLLVEKY------QGK-SWKKVAEEL--KFRTDVQCLHRWQKVLNPELIKGPWTKEEDDTVVKLVHRHGPTKWSLIASFLPGRIGKQCRERWHNHLNPDIRKEEWSVEEDCTIIHATRVHGKKWARIANFLPGRTDNAIKNHWNSTMKR 190
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO) HSP 1 Score: 145 bits (365), Expect = 2.180e-33 Identity = 63/157 (40.13%), Postives = 95/157 (60.51%), Query Frame = 2
Query: 572 WTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVARGVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFR 1042
W+ EE+ L+QG+ +LG W I+ ++L+ RT QC W+ VL+P L+KG W+ EED +I + G+T W+E++ +P R K CRERW NHLDP++ K W+ E+ L A + G W +IA+LLPGRSE +++ WN+ + R
Sbjct: 11 WSDEEDGSLRQGVQTLGAK-------NWKRISEEYLQGRRTDVQCLHRWQKVLRPGLVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAMRR 160
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: S8CXI4_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CXI4_9LAMI) HSP 1 Score: 139 bits (350), Expect = 3.540e-33 Identity = 70/157 (44.59%), Postives = 95/157 (60.51%), Query Frame = 2
Query: 563 RRTWTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVAR-GVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNT 1030
R WT +E+E L+ +++ GK W IA F RT QC W+ VL P L+KG W+ EED I E VA+ G T W+ +A LP R K CRERW+NHL+P + K W++ EE TLL+A HG W ++A+LLPGR++ AI+ HWN+
Sbjct: 65 RGGWTPDEDETLKNAVAAH------KGK-SWKKIAEFF--PCRTEVQCLHRWQKVLNPELIKGPWTLEEDEKIVEMVAKHGPTKWSVIAKSLPGRIGKQCRERWHNHLNPEIKKDAWSLEEELTLLNAHRVHGNKWAELAKLLPGRTDNAIKNHWNS 212
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Match: A0A7S1DIT8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DIT8_HEMAN) HSP 1 Score: 138 bits (348), Expect = 3.770e-33 Identity = 80/217 (36.87%), Postives = 112/217 (51.61%), Query Frame = 2
Query: 548 GKTYNRRTWTKEENEQLQQGISSLGIPEGDLGKHEWNAIASDFLKNSRTGTQCATHWKMVLKPALLKGVWSAEEDSIIYESVAR-GVTDWNEVASLLPKRKAKHCRERWNNHLDPTLSKVGWTVAEEATLLSAVEAHGTSWTQIARLLPGRSEAAIQQHWNTIVFRNATSTGGVRRGRSRADVTVGSSSTYANRGKVKPSGLPTEILPQAPVVRDGG 1195
G+ N R WT EE+E+L + GK W +A + RT QC W+ VL P L+KG W+ EED + + V R G T W+ +AS LP R K CRERW+NHL+P + K W+V E+ T++ A HG W +IA LPGR++ AI+ HWN+ + R +T + ++V + A G + S LPQ P GG
Sbjct: 24 GEGKNSRKWTTEEDERLSLLVEKY------QGK-SWKKVAEEL--KFRTDVQCLHRWQKVLNPELIKGPWTKEEDDTVVKLVHRHGPTKWSLIASFLPGRIGKQCRERWHNHLNPDIRKEEWSVDEDCTIIHATRVHGKKWARIASFLPGRTDNAIKNHWNSTMKRRYFTTP-----KDGSEVPIPDVIVAAINGTAEFSARQLLKLPQIPYSEGGG 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig392.10202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig392.10202.1 >prot_H-paniculata_contig392.10202.1 ID=prot_H-paniculata_contig392.10202.1|Name=mRNA_H-paniculata_contig392.10202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=821bp MAMQMPPPSPRTEKRRLAGAAEQLEVLASPSKRGAPTPRSFFSTGPDPPRback to top mRNA from alignment at H-paniculata_contig392:28833..34038+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig392.10202.1 ID=mRNA_H-paniculata_contig392.10202.1|Name=mRNA_H-paniculata_contig392.10202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5206bp|location=Sequence derived from alignment at H-paniculata_contig392:28833..34038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig392:28833..34038+ >mRNA_H-paniculata_contig392.10202.1 ID=mRNA_H-paniculata_contig392.10202.1|Name=mRNA_H-paniculata_contig392.10202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4926bp|location=Sequence derived from alignment at H-paniculata_contig392:28833..34038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |